BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0490100 Os11g0490100|AK108872
(302 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67330.1 | chr1:25214118-25214993 FORWARD LENGTH=292 206 1e-53
AT1G27930.1 | chr1:9731510-9732379 REVERSE LENGTH=290 204 5e-53
AT1G09610.1 | chr1:3111789-3112637 FORWARD LENGTH=283 156 1e-38
AT1G71690.1 | chr1:26947806-26949064 FORWARD LENGTH=296 152 3e-37
AT4G09990.1 | chr4:6259110-6260064 REVERSE LENGTH=291 140 9e-34
AT1G33800.1 | chr1:12261480-12262456 FORWARD LENGTH=298 140 1e-33
AT2G15440.1 | chr2:6743792-6744781 REVERSE LENGTH=330 121 5e-28
AT4G24910.1 | chr4:12817954-12818901 REVERSE LENGTH=316 88 6e-18
AT5G67210.1 | chr5:26819019-26819972 FORWARD LENGTH=318 87 1e-17
AT3G50220.1 | chr3:18617672-18618640 REVERSE LENGTH=323 84 8e-17
>AT1G67330.1 | chr1:25214118-25214993 FORWARD LENGTH=292
Length = 291
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 123/213 (57%), Gaps = 7/213 (3%)
Query: 65 VRYATTPTVPQQSRAEIXXXXXXXXXXXXXXXXXFGLGHDSPLWHALNPGGATVFLEEDP 124
V YAT+ TVPQQS EI FGLG DS +W +LNPGG TVFLEEDP
Sbjct: 72 VHYATSHTVPQQSFEEISISLNVLKERLPCNFLVFGLGRDSLMWASLNPGGTTVFLEEDP 131
Query: 125 SWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLXXXXXXXXXXXXXXXXXAE 184
W V +P LR H V YRT L A RLL+TYK+ P CL +
Sbjct: 132 EWIEAVLKDAPSLRAHHVQYRTHLSEAGRLLSTYKNEPMCLPAKAFPIRYNE-------K 184
Query: 185 CPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMXXXXXXXXXXXXXXXXXDTDVFLH 244
CPLAL +LP E Y+ EWD++M+DAPKGYF APGRM T VFLH
Sbjct: 185 CPLALTSLPDEFYDTEWDLIMVDAPKGYFPEAPGRMAAIFSSAIMARNRKGDGTTHVFLH 244
Query: 245 DVDRRVEKAYAEEFLCERFRVGATGRLWHFRIP 277
DV+R+VE A+A EFLCE+++V + GRLWHF IP
Sbjct: 245 DVNRKVENAFANEFLCEKYKVNSVGRLWHFEIP 277
>AT1G27930.1 | chr1:9731510-9732379 REVERSE LENGTH=290
Length = 289
Score = 204 bits (519), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
Query: 65 VRYATTPTVPQQSRAEIXXXXXXXXXXXXXXXXXFGLGHDSPLWHALNPGGATVFLEEDP 124
V YAT+ VPQQ+ AEI FGLG DS +W +LNP G T+FLEED
Sbjct: 69 VHYATSNVVPQQNLAEISISFNILKKLAPANFLVFGLGRDSLMWASLNPRGKTLFLEEDL 128
Query: 125 SWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLXXXXXXXXXXXXXXXXXAE 184
W+ V SPFLR H V YRT+L AD LL +YK P C +
Sbjct: 129 EWFQKVTKDSPFLRAHHVRYRTQLQQADSLLRSYKTEPKCFPAKSYLRGNE--------K 180
Query: 185 CPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMXXXXXXXXXXXXXXXXXDTDVFLH 244
C LAL LP E Y+ EWD++M+DAPKGYFA APGRM T VFLH
Sbjct: 181 CKLALTGLPDEFYDTEWDLLMVDAPKGYFAEAPGRMAAIFSAAVMARNRKKPGVTHVFLH 240
Query: 245 DVDRRVEKAYAEEFLCERFRVGATGRLWHFRIPP 278
DV+RRVEK +AEEFLC ++RV A GRLWHF IPP
Sbjct: 241 DVNRRVEKTFAEEFLCRKYRVNAAGRLWHFAIPP 274
>AT1G09610.1 | chr1:3111789-3112637 FORWARD LENGTH=283
Length = 282
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 65 VRYATTPTVPQQSRAEIXXXXXXXXXXXXXXXXXFGLGHDSPLWHALNPGGATVFLEEDP 124
+ Y+T+ PQQ+ EI FGLGHDS +W +LN GG TVFLEED
Sbjct: 65 IHYSTSVITPQQTLKEIAVSSRVLGKKSPCNFLVFGLGHDSLMWSSLNYGGRTVFLEEDE 124
Query: 125 SWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLXXXXXXXXXXXXXXXXXAE 184
+W ++ + P L + V Y ++++ AD L+ K P C +
Sbjct: 125 AWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGKG-PEC----------TAIGDPRYSM 173
Query: 185 CPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMXXXXXXXXXXXXXXXXXDTDVFLH 244
C LAL LPAE+YE WD++M+DAP GY+ APGRM +TDVF+H
Sbjct: 174 CQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQGGETDVFVH 233
Query: 245 DVDRRVEKAYAEEFLCERFRVGATGRLWHFRIP 277
DV+R +E +++ FLCE + GRL HF IP
Sbjct: 234 DVNREIEDKFSKAFLCEGYMKKQEGRLRHFIIP 266
>AT1G71690.1 | chr1:26947806-26949064 FORWARD LENGTH=296
Length = 295
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 107/214 (50%), Gaps = 10/214 (4%)
Query: 65 VRYATTPTVPQQSRAEIXXXXXXXXXXXXXXXXXFGLGHDSPLWHALNPGGATVFLEEDP 124
V YA++ PQQ+ +EI FGLGHDS +W LN GG T+FL+ED
Sbjct: 77 VHYASSNVTPQQTLSEISVTKKELEKKSPCNFLVFGLGHDSLMWATLNHGGRTIFLDEDE 136
Query: 125 SWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLXXXXXXXXXXXXXXXXXAE 184
SW + + P L + V Y+T++ A+ L+A KD C +
Sbjct: 137 SWIHQIAEKFPSLESYHVRYKTKVRDAEALMAATKDREEC---------RRVSTDLRVST 187
Query: 185 CPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMXXXXXXXXXXXXXXXXXDTD-VFL 243
C LAL LP VYE EWD++M+DAP G+ APGRM +T VF+
Sbjct: 188 CELALKGLPEVVYETEWDLIMVDAPTGFHEEAPGRMSAIYTAGMIARRRKDEEETTAVFV 247
Query: 244 HDVDRRVEKAYAEEFLCERFRVGATGRLWHFRIP 277
HDVDR+VE ++ EFLC + GRL HF +P
Sbjct: 248 HDVDRKVEDEFSMEFLCRDYMTKQEGRLRHFTVP 281
>AT4G09990.1 | chr4:6259110-6260064 REVERSE LENGTH=291
Length = 290
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 65 VRYATTPTVPQQSRAEIXXXXXXXXXXXXXXXXXFGLGHDSPLWHALNPGGATVFLEEDP 124
V Y T+ PQQ+ E+ FGLGHDS +W +LN GG T+FLEED
Sbjct: 70 VHYVTSEITPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFLEEDE 129
Query: 125 SWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLXXXXXXXXXXXXXXXXXAE 184
+W V + P L + V Y T++ +++L+ K C ++
Sbjct: 130 AWIETVTKKFPNLESYHVVYDTKVKDSNKLME-LKRTEDC----------KAVSDPRDSK 178
Query: 185 CPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMXXXXXXXXXXXXXXXXXDTDVFLH 244
C L+L PA+VYE +WD++M+DAP GY APGRM +TDVF+H
Sbjct: 179 CALSLKGFPADVYETQWDVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYDGGETDVFVH 238
Query: 245 DVDRRVEKAYAEEFLCERFRVGATGRLWHFRIP 277
D++R VE ++ FLC + GRL HF IP
Sbjct: 239 DINRPVEDEFSVAFLCGGYMKEQQGRLRHFNIP 271
>AT1G33800.1 | chr1:12261480-12262456 FORWARD LENGTH=298
Length = 297
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 65 VRYATTPTVPQQSRAEIXXXXXXXXXXXXXXXXXFGLGHDSPLWHALNPGGATVFLEEDP 124
V Y T+ PQQ+ E+ FGLGHDS +W +LN GG T+F+EED
Sbjct: 78 VHYVTSNVTPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFIEEDQ 137
Query: 125 SWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLXXXXXXXXXXXXXXXXXAE 184
+W ++V + P L + V Y T++ +D+L+ + ++
Sbjct: 138 AWIAIVTKKFPNLESYHVVYDTKVKDSDKLMELGRSEEC-----------RSVSDPRNSK 186
Query: 185 CPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMXXXXXXXXXXXXXXXXXDTDVFLH 244
C LAL + PA+ YE +WD++M+DAP GY APGRM +TDVF+H
Sbjct: 187 CDLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRM-SAIYTAGLLARNREDGETDVFVH 245
Query: 245 DVDRRVEKAYAEEFLCERFRVGATGRLWHFRIP 277
DV+R VE ++ FLC+ + GRL HF IP
Sbjct: 246 DVNRPVEDEFSATFLCKGYMREQNGRLRHFTIP 278
>AT2G15440.1 | chr2:6743792-6744781 REVERSE LENGTH=330
Length = 329
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 99 FGLGHDSPLWHALNPGGATVFLEEDPSWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATY 158
FGL H+S LW ++N G TVF++E P S +P + + V Y T++ A +LL Y
Sbjct: 119 FGLTHESLLWRSINFQGRTVFVDESPYSVSKFEQSNPGVEAYEVVYSTKVSQAKKLLGYY 178
Query: 159 KDHPSCLXXXXXXXXXXXXXXXXXAECPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPG 218
K P C ++C L +++LP VYE +WD+++ID P+GY + +PG
Sbjct: 179 KTRPEC----------RPVQNLLFSDCKLGINDLPNFVYEIDWDVILIDGPRGYASDSPG 228
Query: 219 RMX---XXXXXXXXXXXXXXXXDTDVFLHDVDRRVEKAYAEEFLCERFRVGATGRLWHFR 275
RM TDV +H+ R++E+ Y+EEFLCE + G L HF
Sbjct: 229 RMAPIFTSAVLAKSKDFGTKTKKTDVLVHEFGRKIERVYSEEFLCEENLIEVVGDLGHFV 288
Query: 276 I 276
+
Sbjct: 289 V 289
>AT4G24910.1 | chr4:12817954-12818901 REVERSE LENGTH=316
Length = 315
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 99 FGLGHDSPLWHALNPGGATVFLEEDPSWYSVVRGQSP--FLRGHLVAY-RTRLDHADRLL 155
FG + ++N G TV LE++P+ + + + R + + Y + + +A LL
Sbjct: 124 FGFAPQYLMLSSINTRGITVILEDEPAKIMIPKAEVNPNNTRIYSLKYHQMEVRNAYNLL 183
Query: 156 ATYKDHPSCLXXXXXXXXXXXXXXXXXAECPLALHNLPAEVYEKEWDMVMIDAPKGYFAS 215
+ +P+C ++C L L +LP +V+ +WD++++D P+G
Sbjct: 184 QHARANPAC-------APNMNNQHQGSSDCKLELRDLPQQVHNTKWDVIVVDGPRGDDLE 236
Query: 216 APGRMXXXXXXXXXXXXXXXXXDTDVFLHDVDRRVEKAYAEEFLCERFRVGATGRLWHFR 275
PGRM TDVF+HDV R EK + EFLC+ V A G W FR
Sbjct: 237 TPGRMGSIYTAAVLARKGSSNSTTDVFVHDVHRTAEKWLSWEFLCQENLVSAKGTFWKFR 296
Query: 276 I 276
I
Sbjct: 297 I 297
>AT5G67210.1 | chr5:26819019-26819972 FORWARD LENGTH=318
Length = 317
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 9/177 (5%)
Query: 99 FGLGHDSPLWHALNPGGATVFLEEDPSWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATY 158
FGL H++ LW +LN G TVF+EE+ + + P + V Y T+ A L++
Sbjct: 122 FGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREARELVSAV 181
Query: 159 KDHPSCLXXXXXXXXXXXXXXXXXAECPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPG 218
K+ ++C L L++LP VY+ +WD++++D P+G PG
Sbjct: 182 KE--------AARNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVILVDGPRGDGGDVPG 233
Query: 219 RMXXXXXXXXXXXXXXXXX-DTDVFLHDVDRRVEKAYAEEFLCERFRVGATGRLWHF 274
RM T VF+HD R VE+ +EFLC V + L H+
Sbjct: 234 RMSSIFTAAVLARSKKGGNPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHY 290
>AT3G50220.1 | chr3:18617672-18618640 REVERSE LENGTH=323
Length = 322
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 99 FGLGHDSPLWHALNPGGATVFLEEDPSWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATY 158
FGL H++ LW +LN G TVF+EE+ + + P + V Y T+ A L+
Sbjct: 129 FGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDVFDVQYTTKAHEAGELVTAA 188
Query: 159 KDHPSCLXXXXXXXXXXXXXXXXXAECPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPG 218
K+ ++C L L++LP VY+ +WD++ +D P+G PG
Sbjct: 189 KE--------AAGNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVIFVDGPRGDAHEGPG 240
Query: 219 RMXXXXXXXXXXXXXXXXX-DTDVFLHDVDRRVEKAYAEEFLCERFRVGATGRLWHF 274
RM T VF+HD R VE+ +EFLC V + L H+
Sbjct: 241 RMSSIFTAAVLARSKKGGTPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHY 297
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,476,788
Number of extensions: 135303
Number of successful extensions: 198
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 175
Number of HSP's successfully gapped: 10
Length of query: 302
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 204
Effective length of database: 8,419,801
Effective search space: 1717639404
Effective search space used: 1717639404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)