BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0484500 Os11g0484500|AK071592
         (508 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G41670.1  | chr5:16665647-16667110 REVERSE LENGTH=488          713   0.0  
AT1G64190.1  | chr1:23825549-23827012 REVERSE LENGTH=488          711   0.0  
AT3G02360.2  | chr3:482498-483958 FORWARD LENGTH=487              672   0.0  
>AT5G41670.1 | chr5:16665647-16667110 REVERSE LENGTH=488
          Length = 487

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/483 (72%), Positives = 390/483 (80%), Gaps = 4/483 (0%)

Query: 23  RIGLAGLATMGQNLALNIAEKGFPISVYNRTAAKVDATVSRAEAEGALPVLGHRDPRGFV 82
           RIGLAGLA MGQNLALNIA+KGFPISVYNRT +KVD T+ RA  EG LPV G   PR FV
Sbjct: 8   RIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLPVAGQYSPRDFV 67

Query: 83  LSLSRPRTVVLLVQAGRAVDATIDALVPYLDAGDAIVDGGNEWYQNTERRIEEAAARGIL 142
           LS+ RPR+V++LV+AG  VD TI AL  Y++ GD I+DGGNEWYQNTERRI EA  +G+L
Sbjct: 68  LSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVEAEKKGLL 127

Query: 143 YLGMGVSGGEEGARNGPSLMPGGHIDAYNNIRDILEKAAAQTEDGACVTFVGPGGAGNFV 202
           YLGMGVSGGEEGARNGPSLMPGG   AYNN++DILEK AAQ EDG CVT++G GG+GNFV
Sbjct: 128 YLGMGVSGGEEGARNGPSLMPGGSFTAYNNVKDILEKVAAQVEDGPCVTYIGEGGSGNFV 187

Query: 203 KMVHNGIEYGDMQLIAEAYDVLRRVGGLSNSEIADVFAEWNRGELESFLVEITADIFTVA 262
           KMVHNGIEYGDMQLI+EAYDVL+ VGGLSN E+A++F EWNRGELESFLVEIT+DIF V 
Sbjct: 188 KMVHNGIEYGDMQLISEAYDVLKNVGGLSNDELAEIFTEWNRGELESFLVEITSDIFRVK 247

Query: 263 DPLDGSGGGGLVDKILDKTGMKGTGKWTVQQXXXXXXXXXXXXXSLDGRYLSGLKDERVA 322
           D     G G LVDKILDKTGMKGTGKWTVQQ             SLD RYLSGLKDER  
Sbjct: 248 DDY---GDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDEREN 304

Query: 323 AAGVLEAEGMPSGL-LETINVDKKMLVDRVRQALYASKICSYAQGMNLLRAKSVEKGWNL 381
           AA VLE  G+   +   +  VDKK L+D VRQALYASKICSYAQGMNLLRAKS+EKGW+L
Sbjct: 305 AAKVLEEAGLKEDIGSASRGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSLEKGWDL 364

Query: 382 NLAELARIWKGGCIIRAKFLDRIKKAYDRNPELANLIVDREFAREMVQRQNXXXXXXXXX 441
           NL E+ARIWKGGCIIRA FLDRIKKAY RNP LA+L+VD +FA+EMVQRQ          
Sbjct: 365 NLGEMARIWKGGCIIRAVFLDRIKKAYQRNPNLASLVVDPDFAKEMVQRQAAWRRVVGLA 424

Query: 442 XEAGISTPGMSASLSYFDTYRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLAR 501
             AGISTPGM ASL+YFDTYR +RLPANL+QAQRDLFGAHTYER DRPG++HTEWTKLAR
Sbjct: 425 ISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLAR 484

Query: 502 KSN 504
           KS 
Sbjct: 485 KSQ 487
>AT1G64190.1 | chr1:23825549-23827012 REVERSE LENGTH=488
          Length = 487

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/483 (72%), Positives = 388/483 (80%), Gaps = 4/483 (0%)

Query: 23  RIGLAGLATMGQNLALNIAEKGFPISVYNRTAAKVDATVSRAEAEGALPVLGHRDPRGFV 82
           RIGLAGLA MGQNLALNIAEKGFPISVYNRT +KVD T+ RA  EG LPV G   PR FV
Sbjct: 8   RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAAVEGNLPVSGQYSPRDFV 67

Query: 83  LSLSRPRTVVLLVQAGRAVDATIDALVPYLDAGDAIVDGGNEWYQNTERRIEEAAARGIL 142
           LS+ RPR++++LV+AG  VD TIDA   Y++ GD I+DGGNEWYQNTERRI EA  +G+L
Sbjct: 68  LSIQRPRSLIILVKAGAPVDQTIDAFSEYMEPGDCIIDGGNEWYQNTERRISEAEQKGLL 127

Query: 143 YLGMGVSGGEEGARNGPSLMPGGHIDAYNNIRDILEKAAAQTEDGACVTFVGPGGAGNFV 202
           YLGMGVSGGEEGARNGPSLMPGG   AY+NI+DILEK AAQ EDG CVT++G GG+GNFV
Sbjct: 128 YLGMGVSGGEEGARNGPSLMPGGSFQAYDNIKDILEKVAAQVEDGPCVTYIGEGGSGNFV 187

Query: 203 KMVHNGIEYGDMQLIAEAYDVLRRVGGLSNSEIADVFAEWNRGELESFLVEITADIFTVA 262
           KMVHNGIEYGDMQLI+EAYDVL+ VGGLSN E+A++F EWN GELESFLVEIT+DIF V 
Sbjct: 188 KMVHNGIEYGDMQLISEAYDVLKNVGGLSNEELAEIFTEWNSGELESFLVEITSDIFRVK 247

Query: 263 DPLDGSGGGGLVDKILDKTGMKGTGKWTVQQXXXXXXXXXXXXXSLDGRYLSGLKDERVA 322
           D     G G LVDKILDKTGMKGTGKWTVQQ             SLD RYLSGLKDER  
Sbjct: 248 DEF---GDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDEREN 304

Query: 323 AAGVLEAEGMPSGL-LETINVDKKMLVDRVRQALYASKICSYAQGMNLLRAKSVEKGWNL 381
           AA VL   G+   +   +  +DKK LVD VRQALYASKICSYAQGMNLLRAKS+EK WNL
Sbjct: 305 AAKVLREAGLKEEIGSASSGIDKKRLVDDVRQALYASKICSYAQGMNLLRAKSLEKSWNL 364

Query: 382 NLAELARIWKGGCIIRAKFLDRIKKAYDRNPELANLIVDREFAREMVQRQNXXXXXXXXX 441
           N  ELARIWKGGCIIRA FLDRIKKAY RNP+LA+L+VD EFA+EMVQRQ          
Sbjct: 365 NFGELARIWKGGCIIRAVFLDRIKKAYQRNPDLASLVVDPEFAKEMVQRQAAWRRVVGLA 424

Query: 442 XEAGISTPGMSASLSYFDTYRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLAR 501
             AGISTPGM ASL+YFDTYR +RLPANL+QAQRDLFGAHTYER DRPG++HTEWTKLAR
Sbjct: 425 VSAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLAR 484

Query: 502 KSN 504
           K++
Sbjct: 485 KNH 487
>AT3G02360.2 | chr3:482498-483958 FORWARD LENGTH=487
          Length = 486

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/483 (68%), Positives = 376/483 (77%), Gaps = 5/483 (1%)

Query: 23  RIGLAGLATMGQNLALNIAEKGFPISVYNRTAAKVDATVSRAEAEGALPVLGHRDPRGFV 82
           RIGLAGLA MGQNLALNIAEKGFPISVYNRT +KVD TV RA+ EG LP+ G  DP  FV
Sbjct: 7   RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFHDPESFV 66

Query: 83  LSLSRPRTVVLLVQAGRAVDATIDALVPYLDAGDAIVDGGNEWYQNTERRIEEAAARGIL 142
            S+ +PR +++LV+AG  VD TI  L  YL+ GD IVDGGNEWY+NTERR +  A  G L
Sbjct: 67  KSIQKPRVIIMLVKAGSPVDQTIKTLSAYLEKGDCIVDGGNEWYENTERREKAVAENGFL 126

Query: 143 YLGMGVSGGEEGARNGPSLMPGGHIDAYNNIRDILEKAAAQTED-GACVTFVGPGGAGNF 201
           YLGMGVSGGEEGARNGPS+MPGG  +AY NI DI+ K AAQ  D G CVT++G GG+GNF
Sbjct: 127 YLGMGVSGGEEGARNGPSMMPGGSYEAYKNIEDIVLKVAAQVRDSGPCVTYIGKGGSGNF 186

Query: 202 VKMVHNGIEYGDMQLIAEAYDVLRRVGGLSNSEIADVFAEWNRGELESFLVEITADIFTV 261
           VKMVHNGIEYGDMQLIAEAYDVL+ VG LSN E+  VF++WN+GELESFLVEITADIF +
Sbjct: 187 VKMVHNGIEYGDMQLIAEAYDVLKSVGKLSNEELHSVFSDWNKGELESFLVEITADIFGI 246

Query: 262 ADPLDGSGGGGLVDKILDKTGMKGTGKWTVQQXXXXXXXXXXXXXSLDGRYLSGLKDERV 321
            D     G G LVDK+LDKTGMKGTGKWTVQQ             SLD R+LSGLKDERV
Sbjct: 247 KDD---KGDGHLVDKVLDKTGMKGTGKWTVQQAAELSVPAPTIESSLDARFLSGLKDERV 303

Query: 322 AAAGVLEAEGMPSGLLETINVDKKMLVDRVRQALYASKICSYAQGMNLLRAKSVEKGWNL 381
            AA V +A G    +L    VDKK LVD VR+ALYASKICSYAQGMNL+RAKS+EKGW L
Sbjct: 304 QAAKVFKAGGF-GDILTDQKVDKKQLVDDVRKALYASKICSYAQGMNLIRAKSIEKGWGL 362

Query: 382 NLAELARIWKGGCIIRAKFLDRIKKAYDRNPELANLIVDREFAREMVQRQNXXXXXXXXX 441
            L ELARIWKGGCIIRA FLDRIK+AYDRN ELANL+VD EFA+E+++RQ+         
Sbjct: 363 KLGELARIWKGGCIIRAIFLDRIKQAYDRNAELANLLVDPEFAKEIIERQSAWRRVVCLA 422

Query: 442 XEAGISTPGMSASLSYFDTYRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLAR 501
             +GISTPGMSASL+YFD+YR  RLPANL+QAQRD FGAHTYER D  GSFHTEW K+AR
Sbjct: 423 INSGISTPGMSASLAYFDSYRRERLPANLVQAQRDYFGAHTYERTDVEGSFHTEWFKIAR 482

Query: 502 KSN 504
           +S 
Sbjct: 483 QSK 485
  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,769,173
Number of extensions: 395978
Number of successful extensions: 901
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 895
Number of HSP's successfully gapped: 3
Length of query: 508
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 405
Effective length of database: 8,282,721
Effective search space: 3354502005
Effective search space used: 3354502005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)