BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0484500 Os11g0484500|AK071592
(508 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41670.1 | chr5:16665647-16667110 REVERSE LENGTH=488 713 0.0
AT1G64190.1 | chr1:23825549-23827012 REVERSE LENGTH=488 711 0.0
AT3G02360.2 | chr3:482498-483958 FORWARD LENGTH=487 672 0.0
>AT5G41670.1 | chr5:16665647-16667110 REVERSE LENGTH=488
Length = 487
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/483 (72%), Positives = 390/483 (80%), Gaps = 4/483 (0%)
Query: 23 RIGLAGLATMGQNLALNIAEKGFPISVYNRTAAKVDATVSRAEAEGALPVLGHRDPRGFV 82
RIGLAGLA MGQNLALNIA+KGFPISVYNRT +KVD T+ RA EG LPV G PR FV
Sbjct: 8 RIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLPVAGQYSPRDFV 67
Query: 83 LSLSRPRTVVLLVQAGRAVDATIDALVPYLDAGDAIVDGGNEWYQNTERRIEEAAARGIL 142
LS+ RPR+V++LV+AG VD TI AL Y++ GD I+DGGNEWYQNTERRI EA +G+L
Sbjct: 68 LSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVEAEKKGLL 127
Query: 143 YLGMGVSGGEEGARNGPSLMPGGHIDAYNNIRDILEKAAAQTEDGACVTFVGPGGAGNFV 202
YLGMGVSGGEEGARNGPSLMPGG AYNN++DILEK AAQ EDG CVT++G GG+GNFV
Sbjct: 128 YLGMGVSGGEEGARNGPSLMPGGSFTAYNNVKDILEKVAAQVEDGPCVTYIGEGGSGNFV 187
Query: 203 KMVHNGIEYGDMQLIAEAYDVLRRVGGLSNSEIADVFAEWNRGELESFLVEITADIFTVA 262
KMVHNGIEYGDMQLI+EAYDVL+ VGGLSN E+A++F EWNRGELESFLVEIT+DIF V
Sbjct: 188 KMVHNGIEYGDMQLISEAYDVLKNVGGLSNDELAEIFTEWNRGELESFLVEITSDIFRVK 247
Query: 263 DPLDGSGGGGLVDKILDKTGMKGTGKWTVQQXXXXXXXXXXXXXSLDGRYLSGLKDERVA 322
D G G LVDKILDKTGMKGTGKWTVQQ SLD RYLSGLKDER
Sbjct: 248 DDY---GDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDEREN 304
Query: 323 AAGVLEAEGMPSGL-LETINVDKKMLVDRVRQALYASKICSYAQGMNLLRAKSVEKGWNL 381
AA VLE G+ + + VDKK L+D VRQALYASKICSYAQGMNLLRAKS+EKGW+L
Sbjct: 305 AAKVLEEAGLKEDIGSASRGVDKKRLIDDVRQALYASKICSYAQGMNLLRAKSLEKGWDL 364
Query: 382 NLAELARIWKGGCIIRAKFLDRIKKAYDRNPELANLIVDREFAREMVQRQNXXXXXXXXX 441
NL E+ARIWKGGCIIRA FLDRIKKAY RNP LA+L+VD +FA+EMVQRQ
Sbjct: 365 NLGEMARIWKGGCIIRAVFLDRIKKAYQRNPNLASLVVDPDFAKEMVQRQAAWRRVVGLA 424
Query: 442 XEAGISTPGMSASLSYFDTYRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLAR 501
AGISTPGM ASL+YFDTYR +RLPANL+QAQRDLFGAHTYER DRPG++HTEWTKLAR
Sbjct: 425 ISAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLAR 484
Query: 502 KSN 504
KS
Sbjct: 485 KSQ 487
>AT1G64190.1 | chr1:23825549-23827012 REVERSE LENGTH=488
Length = 487
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/483 (72%), Positives = 388/483 (80%), Gaps = 4/483 (0%)
Query: 23 RIGLAGLATMGQNLALNIAEKGFPISVYNRTAAKVDATVSRAEAEGALPVLGHRDPRGFV 82
RIGLAGLA MGQNLALNIAEKGFPISVYNRT +KVD T+ RA EG LPV G PR FV
Sbjct: 8 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAAVEGNLPVSGQYSPRDFV 67
Query: 83 LSLSRPRTVVLLVQAGRAVDATIDALVPYLDAGDAIVDGGNEWYQNTERRIEEAAARGIL 142
LS+ RPR++++LV+AG VD TIDA Y++ GD I+DGGNEWYQNTERRI EA +G+L
Sbjct: 68 LSIQRPRSLIILVKAGAPVDQTIDAFSEYMEPGDCIIDGGNEWYQNTERRISEAEQKGLL 127
Query: 143 YLGMGVSGGEEGARNGPSLMPGGHIDAYNNIRDILEKAAAQTEDGACVTFVGPGGAGNFV 202
YLGMGVSGGEEGARNGPSLMPGG AY+NI+DILEK AAQ EDG CVT++G GG+GNFV
Sbjct: 128 YLGMGVSGGEEGARNGPSLMPGGSFQAYDNIKDILEKVAAQVEDGPCVTYIGEGGSGNFV 187
Query: 203 KMVHNGIEYGDMQLIAEAYDVLRRVGGLSNSEIADVFAEWNRGELESFLVEITADIFTVA 262
KMVHNGIEYGDMQLI+EAYDVL+ VGGLSN E+A++F EWN GELESFLVEIT+DIF V
Sbjct: 188 KMVHNGIEYGDMQLISEAYDVLKNVGGLSNEELAEIFTEWNSGELESFLVEITSDIFRVK 247
Query: 263 DPLDGSGGGGLVDKILDKTGMKGTGKWTVQQXXXXXXXXXXXXXSLDGRYLSGLKDERVA 322
D G G LVDKILDKTGMKGTGKWTVQQ SLD RYLSGLKDER
Sbjct: 248 DEF---GDGELVDKILDKTGMKGTGKWTVQQAAELSVAAPTIAASLDCRYLSGLKDEREN 304
Query: 323 AAGVLEAEGMPSGL-LETINVDKKMLVDRVRQALYASKICSYAQGMNLLRAKSVEKGWNL 381
AA VL G+ + + +DKK LVD VRQALYASKICSYAQGMNLLRAKS+EK WNL
Sbjct: 305 AAKVLREAGLKEEIGSASSGIDKKRLVDDVRQALYASKICSYAQGMNLLRAKSLEKSWNL 364
Query: 382 NLAELARIWKGGCIIRAKFLDRIKKAYDRNPELANLIVDREFAREMVQRQNXXXXXXXXX 441
N ELARIWKGGCIIRA FLDRIKKAY RNP+LA+L+VD EFA+EMVQRQ
Sbjct: 365 NFGELARIWKGGCIIRAVFLDRIKKAYQRNPDLASLVVDPEFAKEMVQRQAAWRRVVGLA 424
Query: 442 XEAGISTPGMSASLSYFDTYRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLAR 501
AGISTPGM ASL+YFDTYR +RLPANL+QAQRDLFGAHTYER DRPG++HTEWTKLAR
Sbjct: 425 VSAGISTPGMCASLAYFDTYRRARLPANLVQAQRDLFGAHTYERTDRPGAYHTEWTKLAR 484
Query: 502 KSN 504
K++
Sbjct: 485 KNH 487
>AT3G02360.2 | chr3:482498-483958 FORWARD LENGTH=487
Length = 486
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/483 (68%), Positives = 376/483 (77%), Gaps = 5/483 (1%)
Query: 23 RIGLAGLATMGQNLALNIAEKGFPISVYNRTAAKVDATVSRAEAEGALPVLGHRDPRGFV 82
RIGLAGLA MGQNLALNIAEKGFPISVYNRT +KVD TV RA+ EG LP+ G DP FV
Sbjct: 7 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFHDPESFV 66
Query: 83 LSLSRPRTVVLLVQAGRAVDATIDALVPYLDAGDAIVDGGNEWYQNTERRIEEAAARGIL 142
S+ +PR +++LV+AG VD TI L YL+ GD IVDGGNEWY+NTERR + A G L
Sbjct: 67 KSIQKPRVIIMLVKAGSPVDQTIKTLSAYLEKGDCIVDGGNEWYENTERREKAVAENGFL 126
Query: 143 YLGMGVSGGEEGARNGPSLMPGGHIDAYNNIRDILEKAAAQTED-GACVTFVGPGGAGNF 201
YLGMGVSGGEEGARNGPS+MPGG +AY NI DI+ K AAQ D G CVT++G GG+GNF
Sbjct: 127 YLGMGVSGGEEGARNGPSMMPGGSYEAYKNIEDIVLKVAAQVRDSGPCVTYIGKGGSGNF 186
Query: 202 VKMVHNGIEYGDMQLIAEAYDVLRRVGGLSNSEIADVFAEWNRGELESFLVEITADIFTV 261
VKMVHNGIEYGDMQLIAEAYDVL+ VG LSN E+ VF++WN+GELESFLVEITADIF +
Sbjct: 187 VKMVHNGIEYGDMQLIAEAYDVLKSVGKLSNEELHSVFSDWNKGELESFLVEITADIFGI 246
Query: 262 ADPLDGSGGGGLVDKILDKTGMKGTGKWTVQQXXXXXXXXXXXXXSLDGRYLSGLKDERV 321
D G G LVDK+LDKTGMKGTGKWTVQQ SLD R+LSGLKDERV
Sbjct: 247 KDD---KGDGHLVDKVLDKTGMKGTGKWTVQQAAELSVPAPTIESSLDARFLSGLKDERV 303
Query: 322 AAAGVLEAEGMPSGLLETINVDKKMLVDRVRQALYASKICSYAQGMNLLRAKSVEKGWNL 381
AA V +A G +L VDKK LVD VR+ALYASKICSYAQGMNL+RAKS+EKGW L
Sbjct: 304 QAAKVFKAGGF-GDILTDQKVDKKQLVDDVRKALYASKICSYAQGMNLIRAKSIEKGWGL 362
Query: 382 NLAELARIWKGGCIIRAKFLDRIKKAYDRNPELANLIVDREFAREMVQRQNXXXXXXXXX 441
L ELARIWKGGCIIRA FLDRIK+AYDRN ELANL+VD EFA+E+++RQ+
Sbjct: 363 KLGELARIWKGGCIIRAIFLDRIKQAYDRNAELANLLVDPEFAKEIIERQSAWRRVVCLA 422
Query: 442 XEAGISTPGMSASLSYFDTYRCSRLPANLIQAQRDLFGAHTYERIDRPGSFHTEWTKLAR 501
+GISTPGMSASL+YFD+YR RLPANL+QAQRD FGAHTYER D GSFHTEW K+AR
Sbjct: 423 INSGISTPGMSASLAYFDSYRRERLPANLVQAQRDYFGAHTYERTDVEGSFHTEWFKIAR 482
Query: 502 KSN 504
+S
Sbjct: 483 QSK 485
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,769,173
Number of extensions: 395978
Number of successful extensions: 901
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 895
Number of HSP's successfully gapped: 3
Length of query: 508
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 405
Effective length of database: 8,282,721
Effective search space: 3354502005
Effective search space used: 3354502005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)