BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0444900 Os11g0444900|AF493074
(108 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70640.1 | chr1:26636255-26636887 FORWARD LENGTH=175 126 3e-30
AT3G48240.1 | chr3:17867381-17868007 FORWARD LENGTH=181 108 4e-25
AT5G57610.1 | chr5:23325307-23329099 FORWARD LENGTH=1055 106 3e-24
AT5G63130.1 | chr5:25323190-25323857 FORWARD LENGTH=193 101 9e-23
AT4G05150.1 | chr4:2660339-2662675 FORWARD LENGTH=478 100 2e-22
AT3G46920.1 | chr3:17280430-17284857 REVERSE LENGTH=1172 99 6e-22
AT2G35050.1 | chr2:14769708-14774796 FORWARD LENGTH=1258 97 2e-21
AT1G79570.1 | chr1:29932856-29937540 REVERSE LENGTH=1249 95 8e-21
AT3G24715.1 | chr3:9025849-9029948 FORWARD LENGTH=1118 94 2e-20
AT1G16270.1 | chr1:5563890-5568145 FORWARD LENGTH=1148 93 3e-20
AT5G64430.1 | chr5:25762540-25764081 REVERSE LENGTH=514 93 3e-20
AT5G49920.1 | chr5:20306637-20307583 REVERSE LENGTH=289 91 8e-20
AT5G09620.1 | chr5:2983757-2985352 REVERSE LENGTH=532 91 1e-19
AT2G01190.1 | chr2:115023-117296 FORWARD LENGTH=721 91 1e-19
AT1G04700.1 | chr1:1316919-1320653 FORWARD LENGTH=1043 91 2e-19
AT3G18230.1 | chr3:6251495-6253971 FORWARD LENGTH=667 75 6e-15
AT1G25300.1 | chr1:8871568-8872386 FORWARD LENGTH=273 72 7e-14
AT3G26510.5 | chr3:9711886-9712542 REVERSE LENGTH=219 66 4e-12
AT5G16220.1 | chr5:5298604-5300579 REVERSE LENGTH=477 51 1e-07
>AT1G70640.1 | chr1:26636255-26636887 FORWARD LENGTH=175
Length = 174
Score = 126 bits (316), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 20 TFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRC 79
T VKFLCSYGGRI PR+ DG LRY GGD RV+SV R++ F EL++KL E+CG LRC
Sbjct: 6 TTVKFLCSYGGRITPRYPDGKLRYQGGDTRVLSVTRAISFTELKKKLGEICGIAVTSLRC 65
Query: 80 QLPTEDLDALVSVTGDDDLANLLEEYDAA 108
QLPT+DLDALV+V D+DL NL+EEYD A
Sbjct: 66 QLPTDDLDALVTVRSDEDLKNLMEEYDLA 94
>AT3G48240.1 | chr3:17867381-17868007 FORWARD LENGTH=181
Length = 180
Score = 108 bits (271), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
+KFLCSYGGRILPR DG LRYVGG RV+SV S+ F EL KL E CG+ +V L+CQL
Sbjct: 14 LKFLCSYGGRILPRSIDGKLRYVGGFTRVLSVHHSISFTELTMKLEEFCGY-SVELKCQL 72
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
P DL+ L+SV D+DL N++EEYD
Sbjct: 73 PNGDLETLISVKSDEDLVNIVEEYD 97
>AT5G57610.1 | chr5:23325307-23329099 FORWARD LENGTH=1055
Length = 1054
Score = 106 bits (264), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
VKFLCS+ G ILPR DG LRYVGG+ R+VSV+R + + EL K+RE+ AV L+ Q
Sbjct: 24 VKFLCSFLGSILPRPQDGKLRYVGGETRIVSVNRDIRYEELMSKMRELYDGAAV-LKYQQ 82
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
P EDLDALVSV DDD+ N++EEYD
Sbjct: 83 PDEDLDALVSVVNDDDVTNMMEEYD 107
>AT5G63130.1 | chr5:25323190-25323857 FORWARD LENGTH=193
Length = 192
Score = 101 bits (251), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Query: 18 EGTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCL 77
G+ +KFLCSYGGRILPR DG LRYVGG RV+SVDRS+ F EL +KL E CG+ +V L
Sbjct: 11 SGSSLKFLCSYGGRILPRSTDGKLRYVGGHTRVLSVDRSISFSELMKKLYEFCGY-SVDL 69
Query: 78 RCQLPTEDLDALVSVTGDDDLANLLEEYD 106
RCQLP DL+ L+SV +++LA ++EEYD
Sbjct: 70 RCQLPNGDLETLISVKSEEELAEIVEEYD 98
>AT4G05150.1 | chr4:2660339-2662675 FORWARD LENGTH=478
Length = 477
Score = 100 bits (249), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 62/85 (72%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
V+F+C++GGRILPR D L YVGGDNR+V+V R F L KL ++ G + ++ QL
Sbjct: 59 VRFMCTFGGRILPRPPDNQLCYVGGDNRMVAVHRHTTFASLLSKLAKLSGKSNISVKYQL 118
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
P EDLDAL+SV+ D+D+ N+++EYD
Sbjct: 119 PNEDLDALISVSTDEDVENMMDEYD 143
>AT3G46920.1 | chr3:17280430-17284857 REVERSE LENGTH=1172
Length = 1171
Score = 98.6 bits (244), Expect = 6e-22, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
VKFLCSY G+I+PR +DG LRYVGG R+VSV +++ F E ++K+ ++ G V ++ QL
Sbjct: 75 VKFLCSYNGKIIPRPSDGMLRYVGGQTRIVSVKKNVRFDEFEQKMIQVYG-HPVVVKYQL 133
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
P EDLDALVSV+ +D+ N++EE++
Sbjct: 134 PDEDLDALVSVSSSEDIDNMMEEFE 158
>AT2G35050.1 | chr2:14769708-14774796 FORWARD LENGTH=1258
Length = 1257
Score = 97.1 bits (240), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 23 KFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLP 82
KFLCS+GG+++PR D LRYVGG+ R++ + +++ F EL K++E+ EA ++ QLP
Sbjct: 178 KFLCSFGGKVIPRPRDQKLRYVGGETRIIRISKTISFQELMHKMKEIFP-EARTIKYQLP 236
Query: 83 TEDLDALVSVTGDDDLANLLEE 104
EDLDALVSV+ D+DL N++EE
Sbjct: 237 GEDLDALVSVSSDEDLQNMMEE 258
>AT1G79570.1 | chr1:29932856-29937540 REVERSE LENGTH=1249
Length = 1248
Score = 94.7 bits (234), Expect = 8e-21, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
VK LCS+GG+ILPR D LRYVGG+ ++S+ + + + EL++K+ E+ ++ ++ QL
Sbjct: 177 VKILCSFGGKILPRPGDSKLRYVGGETHIISIRKDISWQELRQKILEIY-YQTRVVKYQL 235
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
P EDLDALVSV+ ++DL N+LEEY+
Sbjct: 236 PGEDLDALVSVSSEEDLQNMLEEYN 260
>AT3G24715.1 | chr3:9025849-9029948 FORWARD LENGTH=1118
Length = 1117
Score = 93.6 bits (231), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
VKFLCS+GGRI+PR D L+YVGG+ ++S+ ++L + EL++K +C + ++ QL
Sbjct: 176 VKFLCSFGGRIMPRSTDEKLKYVGGETHIISIRKNLSWEELKKKTSAICQ-QLHSIKYQL 234
Query: 82 PTEDLDALVSVTGDDDLANLLEEYDA 107
P ++LD+L+SV+ D+DL N++EEY+
Sbjct: 235 PGDELDSLISVSSDEDLQNMIEEYNG 260
>AT1G16270.1 | chr1:5563890-5568145 FORWARD LENGTH=1148
Length = 1147
Score = 93.2 bits (230), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
VK LCS+GG+ILPR D LRYVGG+ ++S+ + + + EL++K+ E+ + ++ QL
Sbjct: 165 VKVLCSFGGKILPRPGDSKLRYVGGETHIISIRKDISWQELRQKVLEIY-YRTHVVKYQL 223
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
P EDLDALVSV+ D+DL N++EEY+
Sbjct: 224 PGEDLDALVSVSCDEDLLNMMEEYN 248
>AT5G64430.1 | chr5:25762540-25764081 REVERSE LENGTH=514
Length = 513
Score = 92.8 bits (229), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEA-----VC 76
VKF+CSYGG+I PR D L YV G+ +++SVDR + F L KL +CG V
Sbjct: 45 VKFMCSYGGKIQPRPHDNQLTYVNGETKILSVDRGIRFPVLASKLSTVCGGGDGGGGEVT 104
Query: 77 LRCQLPTEDLDALVSVTGDDDLANLLEEYD 106
+ QLP EDLDAL+SVT DDDL +++ EYD
Sbjct: 105 FKYQLPGEDLDALISVTNDDDLEHMMHEYD 134
>AT5G49920.1 | chr5:20306637-20307583 REVERSE LENGTH=289
Length = 288
Score = 91.3 bits (225), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
VKF+CS+GGRILPR +D L+YVGG+ RVV+V + F EL +KL + + + L+ Q+
Sbjct: 10 VKFMCSFGGRILPRPSDSVLKYVGGETRVVAVSPDISFSELMKKLTAITEND-IVLKYQI 68
Query: 82 PTEDLDALVSVTGDDDLANLLEEYD 106
EDLDALVSV D+D+ +++EEY+
Sbjct: 69 IPEDLDALVSVKSDEDVKHMIEEYN 93
>AT5G09620.1 | chr5:2983757-2985352 REVERSE LENGTH=532
Length = 531
Score = 90.9 bits (224), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMC-----GWEAVC 76
VK +CSYGG+I PR D L YV GD +++SVDR + F L KL +C G E +
Sbjct: 40 VKLMCSYGGKIQPRPHDNQLTYVNGDTKIMSVDRGIRFPALVSKLSAVCSGGGDGGE-IS 98
Query: 77 LRCQLPTEDLDALVSVTGDDDLANLLEEYD 106
+ QLP EDLDAL+SVT D+DL +++ EYD
Sbjct: 99 FKYQLPGEDLDALISVTNDEDLEHMMHEYD 128
>AT2G01190.1 | chr2:115023-117296 FORWARD LENGTH=721
Length = 720
Score = 90.5 bits (223), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLRE-MCGWEAVCLRCQ 80
++F+CSYGG ILPR D +L Y+GGD R+V VDR+ L +L + + L+ Q
Sbjct: 75 LRFMCSYGGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSNTLLDGRSFTLKYQ 134
Query: 81 LPTEDLDALVSVTGDDDLANLLEEYD 106
LP+EDLD+L+SVT D+DL N++EEYD
Sbjct: 135 LPSEDLDSLISVTTDEDLDNMIEEYD 160
>AT1G04700.1 | chr1:1316919-1320653 FORWARD LENGTH=1043
Length = 1042
Score = 90.5 bits (223), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQL 81
+K LCS+GGRIL R DG LRY+GG+ R++S+ + + +EL K +C ++ QL
Sbjct: 122 LKLLCSFGGRILQRPGDGKLRYIGGETRIISIRKHVGLNELMHKTYALCN-HPHTIKYQL 180
Query: 82 PTEDLDALVSVTGDDDLANLLEEYDAA 108
P EDLDAL+SV D+DL +++EEY A
Sbjct: 181 PGEDLDALISVCSDEDLLHMIEEYQEA 207
>AT3G18230.1 | chr3:6251495-6253971 FORWARD LENGTH=667
Length = 666
Score = 75.1 bits (183), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 19 GTFVKFLCSYGGRILPRHADGALRYVGGDNRVVSVD-RSLPFHELQRKLREMCGWEAVCL 77
G ++ +CS+GG I+PR D +L Y GG+ R+V VD R+ R + + L
Sbjct: 61 GAKLRLMCSFGGHIMPRPHDKSLTYSGGETRIVVVDRRASLSSLRSRLSSMLLNGRSFTL 120
Query: 78 RCQLPTEDLDALVSVTGDDDLANLLEEYD 106
+ QLP+EDLD+LV++T D+DL N++EEYD
Sbjct: 121 KYQLPSEDLDSLVTITTDEDLENMIEEYD 149
>AT1G25300.1 | chr1:8871568-8872386 FORWARD LENGTH=273
Length = 272
Score = 71.6 bits (174), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHELQRKLR-EMCGWEAVCLRCQ 80
+ LCSYGGRI+P + +L Y+GG+ R+V V R + F + + L ++ + L+ +
Sbjct: 11 LHLLCSYGGRIMPLPPEKSLHYIGGETRLVIVPRGISFLDFFKLLSDKLLSGRSFSLKYK 70
Query: 81 LPTEDLDALVSVTGDDDLANLLEEYDAA 108
LP+ D D+L++V+ ++DL N++ EYD+
Sbjct: 71 LPSCDFDSLITVSDNEDLQNMIAEYDST 98
>AT3G26510.5 | chr3:9711886-9712542 REVERSE LENGTH=219
Length = 218
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 61 ELQRKLREMCGWE----AVCLRCQLPTEDLDALVSVTGDDDLANLLEEYD 106
EL K+ EMCG V +RCQLPTEDLDALVS+T D+DL NL+EEYD
Sbjct: 71 ELASKMAEMCGGVGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYD 120
>AT5G16220.1 | chr5:5298604-5300579 REVERSE LENGTH=477
Length = 476
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 22 VKFLCSYGGRILPRHADGALRYVGGDNRVVSVDRS--LPFHELQRKLREMCGWE-AVCLR 78
++ +C YGG I+ + RYVGGD R+V++ S F L L ++
Sbjct: 31 LRVMCRYGGSIVSPPQTKSPRYVGGDTRIVAIPSSAETSFASLVSHLTVTLKISYPFKVK 90
Query: 79 CQLPTEDLDALVSVTGDDDLANLLEEY 105
QLP ++LD+L+SV D+D+ ++EE+
Sbjct: 91 YQLPDQELDSLISVEADEDVQIMMEEH 117
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.141 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,251,051
Number of extensions: 84761
Number of successful extensions: 192
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 176
Number of HSP's successfully gapped: 19
Length of query: 108
Length of database: 11,106,569
Length adjustment: 77
Effective length of query: 31
Effective length of database: 8,995,537
Effective search space: 278861647
Effective search space used: 278861647
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 104 (44.7 bits)