BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0439600 Os11g0439600|AK069955
(475 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04080.1 | chr3:1068068-1070917 REVERSE LENGTH=472 384 e-107
AT5G18280.2 | chr5:6050799-6054875 REVERSE LENGTH=631 361 e-100
AT1G14250.1 | chr1:4868675-4871203 FORWARD LENGTH=489 146 2e-35
AT1G14240.1 | chr1:4865159-4867777 FORWARD LENGTH=484 146 2e-35
AT2G02970.1 | chr2:865395-868007 REVERSE LENGTH=556 142 4e-34
AT1G14230.1 | chr1:4861497-4863991 FORWARD LENGTH=504 135 3e-32
AT4G19180.1 | chr4:10485518-10487868 REVERSE LENGTH=741 85 8e-17
>AT3G04080.1 | chr3:1068068-1070917 REVERSE LENGTH=472
Length = 471
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/408 (48%), Positives = 270/408 (66%), Gaps = 3/408 (0%)
Query: 64 DGAGNDKYAVIFDAGSTGSRVHVFRFDKQMDLVKIGDDMELFAKVKPGLSSYAGKPQEAA 123
+ G YAVIFDAGS+GSRVHV+ FD+ +DLV + +++ELF ++KPGLS+Y P+++A
Sbjct: 63 NSRGPKNYAVIFDAGSSGSRVHVYCFDQNLDLVPLENELELFLQLKPGLSAYPNDPRQSA 122
Query: 124 NSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNFQYK 183
NS+ LL+KA+ VP++L+ +TP+++GATAGLR +G + SE IL+AVR+L+ +S + +
Sbjct: 123 NSLVTLLDKAEASVPRELRPKTPVRVGATAGLRALGHQASENILQAVRELLKGRSRLKTE 182
Query: 184 PEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSDAAENSP 243
++VL G+QEGS WV +NYLL LG YS TVGV+DLGGGSVQMAYAI + A +P
Sbjct: 183 ANAVTVLDGTQEGSYQWVTINYLLRTLGKPYSDTVGVVDLGGGSVQMAYAIPEEDAATAP 242
Query: 244 PVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILKTKNGQFSSCMLREFNGTYK 303
G+D YV + YLKG+ Y LYVHSYLHYGL A+R EILK + C+ + GTYK
Sbjct: 243 KPVEGEDSYVREMYLKGRKYFLYVHSYLHYGLLAARAEILKVSEDSNNPCIATGYAGTYK 302
Query: 304 YNGEEYDAAASPEGADHGKCXXXXXXX-XXXDAPCESRNCSFNGVWNXXXXXXMADLYVA 362
Y G+ + AAASP GA +C ++ C C+F GVWN ++VA
Sbjct: 303 YGGKAFKAAASPSGASLDECRRVAINALKVNNSLCTHMKCTFGGVWNGGGGGGQKKMFVA 362
Query: 363 SYFYDRAVHGGFVVDDAPSXXXXXXXXXXXXXXXCSLSSGEAAAAYP--EAFDVQFICMD 420
S+F+DRA GFV + P C++ E + +P E ++ ++C+D
Sbjct: 363 SFFFDRAAEAGFVDPNQPVAEVRPLDFEKAANKACNMRMEEGKSKFPRVEEDNLPYLCLD 422
Query: 421 LTYQYTLLTKGFGLKPTREMTLVKQVKYGDCYVESAWPLGTAIEALSS 468
L YQYTLL GFGLKP++ +TLVK+VKYGD VE+AWPLG+AIEA+SS
Sbjct: 423 LVYQYTLLVDGFGLKPSQTITLVKKVKYGDYAVEAAWPLGSAIEAVSS 470
>AT5G18280.2 | chr5:6050799-6054875 REVERSE LENGTH=631
Length = 630
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/468 (42%), Positives = 274/468 (58%), Gaps = 58/468 (12%)
Query: 59 ISARKDGA---GNDKYAVIFDAGSTGSRVHVFRFDKQMDLVKIGDDMELFAK-------- 107
+ RK G G YAVIFDAGS+GSRVHV+ FD+ +DL+ +G+++ELF +
Sbjct: 162 VHNRKGGPNSRGPKNYAVIFDAGSSGSRVHVYCFDQNLDLIPLGNELELFLQSLVKKLAS 221
Query: 108 --------------------------------------------VKPGLSSYAGKPQEAA 123
+KPGLS+Y P++AA
Sbjct: 222 PNGSNRANMTLFDHGNISCPEVKLNRINGKLRTLLSMYIIDLCSLKPGLSAYPTDPRQAA 281
Query: 124 NSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNFQYK 183
NS+ LL+KA+ VP++L+ +T +++GATAGLR +G + SE IL+AVR+L+ +S + +
Sbjct: 282 NSLVSLLDKAEASVPRELRPKTHVRVGATAGLRTLGHDASENILQAVRELLRDRSMLKTE 341
Query: 184 PEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSDAAENSP 243
++VL G+QEGS WV +NYLL LG YS TVGV+DLGGGSVQMAYAIS + A ++P
Sbjct: 342 ANAVTVLDGTQEGSYQWVTINYLLRNLGKPYSDTVGVVDLGGGSVQMAYAISEEDAASAP 401
Query: 244 PVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILKTKNGQFSSCMLREFNGTYK 303
G+D YV + YLKG+ Y LYVHSYLHYGL A+R EILK + C++ ++G YK
Sbjct: 402 KPLEGEDSYVREMYLKGRKYFLYVHSYLHYGLLAARAEILKVSEDSENPCIVAGYDGMYK 461
Query: 304 YNGEEYDAAASPEGADHGKCXXXXXXX-XXXDAPCESRNCSFNGVWNXXXXXXMADLYVA 362
Y G+E+ A AS GA +C D C C+F GVWN +++VA
Sbjct: 462 YGGKEFKAPASQSGASLDECRRITINALKVNDTLCTHMKCTFGGVWNGGRGGGQKNMFVA 521
Query: 363 SYFYDRAVHGGFVVDDAPSXXXXXXXXXXXXXXXCSLSSGEAAAAYP--EAFDVQFICMD 420
S+F+DRA GFV P CS+ E + +P E ++ ++CMD
Sbjct: 522 SFFFDRAAEAGFVDPKQPVATVRPMDFEKAAKKACSMKLEEGKSTFPLVEEENLPYLCMD 581
Query: 421 LTYQYTLLTKGFGLKPTREMTLVKQVKYGDCYVESAWPLGTAIEALSS 468
L YQYTLL GFGL+P++ +TLVK+VKYGD VE+AWPLG+AIEA+SS
Sbjct: 582 LVYQYTLLIDGFGLEPSQTITLVKKVKYGDQAVEAAWPLGSAIEAVSS 629
>AT1G14250.1 | chr1:4868675-4871203 FORWARD LENGTH=489
Length = 488
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 128/217 (58%), Gaps = 13/217 (5%)
Query: 71 YAVIFDAGSTGSRVHVF--RFDKQMDLVKIGDDMELFAKVKPGLSSYAGKPQEAANSIAP 128
Y+VI DAGS+G+R+HVF F+ + G++ K+ PGLSSYA P+ A+ S+
Sbjct: 71 YSVIIDAGSSGTRIHVFGYWFESGKPVFDFGEEHYASLKLSPGLSSYADNPEGASVSVTK 130
Query: 129 LLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNFQYKPEWIS 188
L+E AKG +PK K++ ++L ATAG+RL+ EQIL+ R ++ S S F+++ EW +
Sbjct: 131 LVEFAKGRIPKGKLKKSDIRLMATAGMRLLDVPVQEQILDVTRRVLRS-SGFKFQDEWAT 189
Query: 189 VLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSDAAENSPPVPVG 248
V+ G+ EG WV N+ LG LGGD KT G+++LGG S Q+ + S E+ PP
Sbjct: 190 VISGTDEGIYAWVVANHALGSLGGDPLKTTGIVELGGASAQVTFVPS----EHVPPEFSR 245
Query: 249 KDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILKT 285
Y Y +Y HS+L +G A+ ++L++
Sbjct: 246 TISY------GNVSYTIYSHSFLDFGQDAAEDKLLES 276
>AT1G14240.1 | chr1:4865159-4867777 FORWARD LENGTH=484
Length = 483
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 13/217 (5%)
Query: 70 KYAVIFDAGSTGSRVHVF--RFDKQMDLVKIGDDMELFAKVKPGLSSYAGKPQEAANSIA 127
+Y+V+ DAGS+G+RVHVF F+ + G+ K+ PGLSSYA P+ A+ S+
Sbjct: 69 RYSVLIDAGSSGTRVHVFGYWFESGKPVFDFGEKHYANLKLTPGLSSYADNPEGASVSVT 128
Query: 128 PLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNFQYKPEWI 187
L+E AK +PK++ +R+ ++L ATAG+RL+ EQILE R ++ S S F ++ EW
Sbjct: 129 KLVEFAKQRIPKRMFRRSDIRLMATAGMRLLEVPVQEQILEVTRRVLRS-SGFMFRDEWA 187
Query: 188 SVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSDAAENSPPVPV 247
+V+ GS EG W+ NY LG LG D +T G+++LGG S Q+ + ++E+ PP
Sbjct: 188 NVISGSDEGIYSWITANYALGSLGTDPLETTGIVELGGASAQVTFV----SSEHVPP--- 240
Query: 248 GKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILK 284
Y Y +Y HS+L YG A+ ++L+
Sbjct: 241 ---EYSRTIAYGNISYTIYSHSFLDYGKDAALKKLLE 274
>AT2G02970.1 | chr2:865395-868007 REVERSE LENGTH=556
Length = 555
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 15/215 (6%)
Query: 67 GNDKYAVIFDAGSTGSRVHVF--RFDKQMDLVKIGDDMELFAKVKPGLSSYAGKPQEAAN 124
G+ +Y+V+ D GSTG+R+HVF R + + + K+ PGLS++A P A+
Sbjct: 83 GSLRYSVVIDGGSTGTRIHVFGYRIESGKPVFEFRGANYASLKLHPGLSAFADDPDGASV 142
Query: 125 SIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNFQYKP 184
S+ L+E AKG VPK + T ++L ATAG+RL+ E+IL R ++ S S F ++
Sbjct: 143 SLTELVEFAKGRVPKGMWIETEVRLMATAGMRLLELPVQEKILGVARRVLKS-SGFLFRD 201
Query: 185 EWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSDAAENSPP 244
EW SV+ GS EG WV N+ LG LGGD KT G+++LGG S Q+ + +S P
Sbjct: 202 EWASVISGSDEGVYAWVVANFALGSLGGDPLKTTGIVELGGASAQVTFV-------SSEP 254
Query: 245 VPVGKDPYVTKEYLKGK-DYNLYVHSYLHYGLQAS 278
+P P ++ G YNLY HS+LH+G A+
Sbjct: 255 MP----PEFSRTISFGNVTYNLYSHSFLHFGQNAA 285
>AT1G14230.1 | chr1:4861497-4863991 FORWARD LENGTH=504
Length = 503
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 17/216 (7%)
Query: 71 YAVIFDAGSTGSRVHVF--RFDKQMDLVKIGDDMELFAKVKPGLSSYAGKPQEAANSIAP 128
Y+VI D GS+G+RVHVF R + + G++ K+ PGLS+YA P+ + S+
Sbjct: 81 YSVIIDGGSSGTRVHVFGYRIESGKPVFDFGEENYASLKLSPGLSAYADNPEGVSESVTE 140
Query: 129 LLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNFQYKPEWIS 188
L+E AK V K K++ ++L ATAG+RL+ EQIL+ R ++ S S F ++ EW S
Sbjct: 141 LVEFAKKRVHKGKLKKSDIRLMATAGMRLLELPVQEQILDVTRRVLRS-SGFDFRDEWAS 199
Query: 189 VLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSD--AAENSPPVP 246
V+ GS EG WV N+ LG LGG+ KT G+++LGG S Q+ + +S++ +E S +
Sbjct: 200 VISGSDEGVYAWVVANHALGSLGGEPLKTTGIVELGGASAQVTF-VSTELVPSEFSRTLA 258
Query: 247 VGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEI 282
G YNLY HS+L +G A++ ++
Sbjct: 259 YGN-----------VSYNLYSHSFLDFGQDAAQEKL 283
>AT4G19180.1 | chr4:10485518-10487868 REVERSE LENGTH=741
Length = 740
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 26/187 (13%)
Query: 67 GNDKYAVIFDAGSTGSRVHVF------RFDKQMDLV--------------KIGDDMELFA 106
G +Y V+FD GSTG+R +V+ + D + +V + D ME
Sbjct: 141 GASRYYVVFDCGSTGTRAYVYQASINYKKDSSLPIVMKSLTEGISRKSRGRAYDRME--- 197
Query: 107 KVKPGLSSYAGKPQEAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQI 166
+PG +I PL++ A+ +PK + T L + ATAG+R + S I
Sbjct: 198 -TEPGFDKLVNNRTGLKTAIKPLIQWAEKQIPKNAHRTTSLFVYATAGVRRLRPADSSWI 256
Query: 167 LEAVRDLVHSKSNFQYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSK-TVGVIDLGG 225
L V ++ +KS F + EW+ ++ G++E W ALNY LG K T G +DLGG
Sbjct: 257 LGNVWSIL-AKSPFTCRREWVKIISGTEEAYFGWTALNYQTSMLGALPKKATFGALDLGG 315
Query: 226 GSVQMAY 232
S+Q+ +
Sbjct: 316 SSLQVTF 322
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,094,762
Number of extensions: 376727
Number of successful extensions: 828
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 809
Number of HSP's successfully gapped: 8
Length of query: 475
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 373
Effective length of database: 8,310,137
Effective search space: 3099681101
Effective search space used: 3099681101
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)