BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0286300 Os11g0286300|Os11g0286300
(75 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G07050.1 | chr2:2924629-2930295 FORWARD LENGTH=760 95 8e-21
AT1G78955.1 | chr1:29689153-29694255 REVERSE LENGTH=770 93 3e-20
AT3G45130.1 | chr3:16512552-16517522 REVERSE LENGTH=757 92 4e-20
AT1G78960.1 | chr1:29696722-29701024 FORWARD LENGTH=764 90 3e-19
AT1G78970.2 | chr1:29703414-29707715 FORWARD LENGTH=758 87 2e-18
AT4G15340.1 | chr4:8754670-8760589 REVERSE LENGTH=767 85 8e-18
AT1G78950.1 | chr1:29684558-29688673 REVERSE LENGTH=760 84 1e-17
AT5G48010.2 | chr5:19457001-19461538 FORWARD LENGTH=767 84 2e-17
AT3G29255.1 | chr3:11209586-11213909 FORWARD LENGTH=707 80 2e-16
AT1G78500.1 | chr1:29531646-29535177 FORWARD LENGTH=768 79 6e-16
AT4G15370.1 | chr4:8773786-8779685 REVERSE LENGTH=760 75 5e-15
AT1G66960.1 | chr1:24985155-24989664 REVERSE LENGTH=764 75 1e-14
AT5G36150.1 | chr5:14220737-14225422 REVERSE LENGTH=761 74 1e-14
AT5G42600.1 | chr5:17053566-17057975 FORWARD LENGTH=762 71 1e-13
>AT2G07050.1 | chr2:2924629-2930295 FORWARD LENGTH=760
Length = 759
Score = 94.7 bits (234), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
ML LI AG E+D PLHRAA LIN Q++ G+FPQQEI+G FN + Y YRN+FPI
Sbjct: 684 MLALIGAGQAEVDRKPLHRAARYLINAQMENGDFPQQEIMGVFNRNCMITYAAYRNIFPI 743
Query: 61 WALGEFRHRLLAKKG 75
WALGE+R ++L ++G
Sbjct: 744 WALGEYRCQVLLQQG 758
>AT1G78955.1 | chr1:29689153-29694255 REVERSE LENGTH=770
Length = 769
Score = 92.8 bits (229), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
M+GL++AG E DP PLHRAA LIN QL+ G+FPQQEI G+F + +Y YRN+FP+
Sbjct: 687 MMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFPQQEITGAFMKNCLLHYAAYRNIFPV 746
Query: 61 WALGEFRHRL 70
WAL E+R R+
Sbjct: 747 WALAEYRRRV 756
>AT3G45130.1 | chr3:16512552-16517522 REVERSE LENGTH=757
Length = 756
Score = 92.4 bits (228), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
+L LI AG DP+PLHR A LIN Q++ G++PQQEI+G FN + +Y YRN+FPI
Sbjct: 684 LLALIEAGQASRDPMPLHRGAKSLINSQMEDGDYPQQEILGVFNRNCMISYSAYRNIFPI 743
Query: 61 WALGEFRHRLLA 72
WALGE+R +L+
Sbjct: 744 WALGEYRKLMLS 755
>AT1G78960.1 | chr1:29696722-29701024 FORWARD LENGTH=764
Length = 763
Score = 89.7 bits (221), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
M+GLI+AG E DP PLHRAA +I QL+ G+FPQQEI+G F ++ +Y YRN+FP+
Sbjct: 687 MMGLIHAGQAERDPTPLHRAAKLIITSQLENGDFPQQEILGVFMNTCMLHYATYRNIFPL 746
Query: 61 WALGEFRHRLLA 72
WAL E+R A
Sbjct: 747 WALAEYRKAAFA 758
>AT1G78970.2 | chr1:29703414-29707715 FORWARD LENGTH=758
Length = 757
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
M+ LI+ G E D IPLHRAA +IN QL+ G+FPQQEIVG+F ++ +Y YRN FP+
Sbjct: 684 MMALIHTGQAERDLIPLHRAAKLIINSQLENGDFPQQEIVGAFMNTCMLHYATYRNTFPL 743
Query: 61 WALGEFR 67
WAL E+R
Sbjct: 744 WALAEYR 750
>AT4G15340.1 | chr4:8754670-8760589 REVERSE LENGTH=767
Length = 766
Score = 84.7 bits (208), Expect = 8e-18, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
++ LI G +E DP+P+HRAA +IN+QLD G+FPQQE++G FN ++ +YP YRN++ +
Sbjct: 692 LMVLIMGGQMERDPLPVHRAAKVVINLQLDNGDFPQQEVMGVFNMNVLLHYPTYRNIYSL 751
Query: 61 WALGEFRHRL 70
WAL + L
Sbjct: 752 WALTLYTQAL 761
>AT1G78950.1 | chr1:29684558-29688673 REVERSE LENGTH=760
Length = 759
Score = 84.3 bits (207), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
++GLI++G E DPIPLHRAA +IN QL++G+FPQQ+ G F + +Y YRN+ P+
Sbjct: 687 LMGLIHSGQAERDPIPLHRAAKLIINSQLESGDFPQQQATGVFLKNCTLHYAAYRNIHPL 746
Query: 61 WALGEFRHRL 70
WAL E+R R+
Sbjct: 747 WALAEYRARV 756
>AT5G48010.2 | chr5:19457001-19461538 FORWARD LENGTH=767
Length = 766
Score = 84.0 bits (206), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
++ LI +E DP+P+HRAA LIN QLD G+FPQQEI+G+F ++ ++P YRN F +
Sbjct: 692 LMVLIMGDQMERDPLPVHRAAQVLINSQLDNGDFPQQEIMGTFMRTVMLHFPTYRNTFSL 751
Query: 61 WALGEFRHRL 70
WAL + H L
Sbjct: 752 WALTHYTHAL 761
>AT3G29255.1 | chr3:11209586-11213909 FORWARD LENGTH=707
Length = 706
Score = 80.1 bits (196), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
M+ LI +G +E DP+P+HRAA LIN Q++ G+FPQQE+ G + ++ +YP YRN+F +
Sbjct: 633 MMVLIMSGQMERDPLPVHRAAKVLINSQMENGDFPQQELRGVYKMNVLLHYPTYRNIFSL 692
Query: 61 WAL 63
WAL
Sbjct: 693 WAL 695
>AT1G78500.1 | chr1:29531646-29535177 FORWARD LENGTH=768
Length = 767
Score = 78.6 bits (192), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
++ LI G +E DP+P+HRAA LIN QLD G+FPQ+EI+G F ++ +Y YRN+F +
Sbjct: 693 LMVLIMGGQMERDPLPVHRAAKVLINSQLDNGDFPQEEIMGVFKMNVMVHYATYRNIFTL 752
Query: 61 WAL 63
WAL
Sbjct: 753 WAL 755
>AT4G15370.1 | chr4:8773786-8779685 REVERSE LENGTH=760
Length = 759
Score = 75.5 bits (184), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
++ LI ++ DP+P+HRAA LIN Q+D G+FPQQEI+G F ++ ++P YRN+F +
Sbjct: 687 LMVLIMGNQMKRDPLPVHRAAKVLINSQMDNGDFPQQEIMGVFKMNVMLHFPTYRNMFTL 746
Query: 61 WALGEFRHRL 70
WAL + L
Sbjct: 747 WALTHYTKAL 756
>AT1G66960.1 | chr1:24985155-24989664 REVERSE LENGTH=764
Length = 763
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
M+ LI+AG + D IPLH AA +I QL+ G+FPQQE++G+ S+ +Y Y+++FP
Sbjct: 687 MMALIHAGQAKRDLIPLHSAAKFIITSQLENGDFPQQELLGASMSTCMLHYSTYKDIFPP 746
Query: 61 WALGEFR 67
WAL E+R
Sbjct: 747 WALAEYR 753
>AT5G36150.1 | chr5:14220737-14225422 REVERSE LENGTH=761
Length = 760
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
++ LI G ++ DP+P+HRAA LIN Q+D G+FPQQEI G + ++ N+P +RN F +
Sbjct: 687 LMVLIMGGQMDRDPLPVHRAAKVLINSQMDNGDFPQQEIRGVYKMNVMLNFPTFRNSFTL 746
Query: 61 WALGEF 66
WAL +
Sbjct: 747 WALTHY 752
>AT5G42600.1 | chr5:17053566-17057975 FORWARD LENGTH=762
Length = 761
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 1 MLGLIYAGHVEIDPIPLHRAAMELINMQLDTGEFPQQEIVGSFNSSLFFNYPNYRNLFPI 60
M+ L+ G +E DP P+HRAA LIN QLD G+FPQQE G + ++ +YP YRN+F +
Sbjct: 688 MMVLLIGGQMERDPSPVHRAAKVLINSQLDIGDFPQQERRGIY-MNMLLHYPTYRNMFSL 746
Query: 61 WALGEFRHRL 70
WAL + + L
Sbjct: 747 WALALYTNAL 756
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.144 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,681,580
Number of extensions: 56894
Number of successful extensions: 119
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 118
Number of HSP's successfully gapped: 14
Length of query: 75
Length of database: 11,106,569
Length adjustment: 47
Effective length of query: 28
Effective length of database: 9,818,017
Effective search space: 274904476
Effective search space used: 274904476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 104 (44.7 bits)