BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0265000 Os11g0265000|AK103877
(491 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55810.1 | chr1:20861273-20864003 FORWARD LENGTH=467 713 0.0
AT4G26510.1 | chr4:13384503-13387920 FORWARD LENGTH=470 709 0.0
AT3G27190.1 | chr3:10039504-10042917 REVERSE LENGTH=484 662 0.0
AT5G40870.1 | chr5:16375021-16378384 FORWARD LENGTH=487 648 0.0
AT3G27440.1 | chr3:10155555-10157931 FORWARD LENGTH=466 643 0.0
AT1G26190.1 | chr1:9057285-9060433 REVERSE LENGTH=675 83 3e-16
AT1G32060.1 | chr1:11532668-11534406 FORWARD LENGTH=396 78 1e-14
AT1G73980.1 | chr1:27820292-27823527 REVERSE LENGTH=644 77 3e-14
AT3G53900.2 | chr3:19956914-19959006 REVERSE LENGTH=297 69 4e-12
>AT1G55810.1 | chr1:20861273-20864003 FORWARD LENGTH=467
Length = 466
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/474 (73%), Positives = 400/474 (84%), Gaps = 10/474 (2%)
Query: 1 MGSTSRPVDDEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVENGHQEPFVIGVAG 60
M S S D +++ ++ VH+S M+G S ++P E H +PFVIGVAG
Sbjct: 1 MASKS---DVNIIETSSKVHFSGFH----QMDGLAS--NRPEQMAEEEEHGQPFVIGVAG 51
Query: 61 GASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 120
GA+SGK+TVC MI+ QL DQR VVV Q+SFY+ +++ ELV VHDYNFDHPDAFDTE LLS
Sbjct: 52 GAASGKTTVCDMIMQQLHDQRAVVVNQDSFYHNVNEVELVRVHDYNFDHPDAFDTEQLLS 111
Query: 121 CMENLKHGKAVDIPNYNFKTYKS-VASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFV 179
ME L+ G+AVDIPNY+FK+YK+ V R+VNPSDVIILEGIL+FHD RVRDLMNMKIFV
Sbjct: 112 SMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPRVRDLMNMKIFV 171
Query: 180 DTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDND 239
D DADVRL RRI+RDT+EKGRDI TVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDN
Sbjct: 172 DADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNH 231
Query: 240 VAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLI 299
VAIDLIVQHI TKLGQHDLCK++PNLYVIQ+T+QIRGMHT+IRD+ TT HDFIFY+DRLI
Sbjct: 232 VAIDLIVQHIHTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSKTTKHDFIFYSDRLI 291
Query: 300 RLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRAXXXXXXX 359
RLVVEHGLGHLPF EKQV+TPTGSVY+GV+F K+LCG+SVIRSGESMENALRA
Sbjct: 292 RLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRACCKGIKI 351
Query: 360 XXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNII 419
LIHREGDNG+QLIY +P DI+ RHVLLLDPILGTGNSAVQAI LL+ KGV E+NII
Sbjct: 352 GKILIHREGDNGQQLIYEKLPSDISERHVLLLDPILGTGNSAVQAIRLLISKGVPESNII 411
Query: 420 FLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDD 473
FLNLISAP+GV+VV K+FPR+KIVTSEI+ GLND+FRV+PGMGEFGDRYFGTDD
Sbjct: 412 FLNLISAPEGVNVVCKKFPRIKIVTSEIELGLNDEFRVVPGMGEFGDRYFGTDD 465
>AT4G26510.1 | chr4:13384503-13387920 FORWARD LENGTH=470
Length = 469
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/473 (73%), Positives = 401/473 (84%), Gaps = 5/473 (1%)
Query: 1 MGSTSRPVDDEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVENGHQEPFVIGVAG 60
MGS S ++++AA+ H+S L + +MNG + TTS E+ ++PFVIGVAG
Sbjct: 1 MGSKSVV---DMIEAASRAHFSGLHVNG-HMNGLEPSALKETTSASEDIQRQPFVIGVAG 56
Query: 61 GASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 120
GA+SGK+TVC MII QL DQRVV++ +SFY+ L++EEL VH+YNFDHPDAFDTE LLS
Sbjct: 57 GAASGKTTVCDMIIQQLHDQRVVLINLDSFYHNLTEEELARVHEYNFDHPDAFDTEHLLS 116
Query: 121 CMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVRDLMNMKIFVD 180
CME L+ G+AVDIP Y+FKTY+S + R+VNP+DVIILEGIL+FHD RVR LMNMKIFV
Sbjct: 117 CMEKLRQGQAVDIPKYDFKTYRS-SVFRRVNPTDVIILEGILLFHDPRVRKLMNMKIFVC 175
Query: 181 TDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDNDV 240
TDADVRL RRI+RDT+E GRDI TVLDQYSKFVKPAF+DFILPTKKYADIIIPRGGDN V
Sbjct: 176 TDADVRLARRIKRDTVENGRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHV 235
Query: 241 AIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRLIR 300
AIDLIVQHI TKLGQHDLCK++PNLYVI +T+QIRGMHT+IRD+ TT HDF+FY+DRLIR
Sbjct: 236 AIDLIVQHICTKLGQHDLCKIYPNLYVIHSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIR 295
Query: 301 LVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRAXXXXXXXX 360
LVVEHGLGHLPF EKQVITPTG VY+GV+F KRLCG+SVIRSGESMENALRA
Sbjct: 296 LVVEHGLGHLPFTEKQVITPTGCVYSGVDFCKRLCGVSVIRSGESMENALRACCKGIKIG 355
Query: 361 XXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNIIF 420
LIHREGDNG+QL+Y +P DI+ RHVLLLDPILGTGNSAV+AI+LL+ KGV E NIIF
Sbjct: 356 KILIHREGDNGQQLVYEKLPNDISERHVLLLDPILGTGNSAVEAINLLISKGVPEGNIIF 415
Query: 421 LNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDD 473
LNLISAPQGVHVV K+FPR+KIVTSEID GLN++FRVIPGMGEFGDRYFGTDD
Sbjct: 416 LNLISAPQGVHVVCKKFPRIKIVTSEIDNGLNEEFRVIPGMGEFGDRYFGTDD 468
>AT3G27190.1 | chr3:10039504-10042917 REVERSE LENGTH=484
Length = 483
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/481 (66%), Positives = 385/481 (80%), Gaps = 23/481 (4%)
Query: 10 DEVLDAATGVHYSALRLEELNM----------------NGSVSGEDQPTTSGVENGHQEP 53
D V++ A+G H+S LRL+ L N S S D P +P
Sbjct: 9 DYVMEKASGPHFSGLRLDGLLSSPSKSSVSSPSHFRLSNSSFSATDDPAAP------HQP 62
Query: 54 FVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAF 113
FVIGV GG +SGK+TVC MII QL D R+V+V Q+SFY GL+ EEL HV +YNFDHPDAF
Sbjct: 63 FVIGVTGGTASGKTTVCDMIIQQLHDHRIVLVNQDSFYRGLTSEELEHVQEYNFDHPDAF 122
Query: 114 DTELLLSCMENLKHGKAVDIPNYNFKTY-KSVASARKVNPSDVIILEGILVFHDSRVRDL 172
DTE LL C++ LK G+ IP Y+FKT+ + V + R+VN DVIILEGILVFHDSRVRDL
Sbjct: 123 DTEQLLHCVDILKSGQPYQIPIYDFKTHQRKVDAFRQVNACDVIILEGILVFHDSRVRDL 182
Query: 173 MNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIII 232
MNMKIFVDTDADVRL RRIRRDT+E+GRD+ +VL+QY+KFVKPAF+DF+LP+KKYAD+II
Sbjct: 183 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVII 242
Query: 233 PRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFI 292
PRGGDN VA+DLIVQHI TKLGQHDLCK++PN++VI+TT+QIRGMHT+IR+ + HDF+
Sbjct: 243 PRGGDNHVAVDLIVQHIHTKLGQHDLCKIYPNVFVIETTFQIRGMHTLIREKDISKHDFV 302
Query: 293 FYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRA 352
FY+DRLIRLVVEHGLGHLPF EKQV+TPTGSVY+GV+F K+LCG+SVIRSGESMENALRA
Sbjct: 303 FYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYSGVDFCKKLCGVSVIRSGESMENALRA 362
Query: 353 XXXXXXXXXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKG 412
LIHR+GDNG QLIY +P DI+ RHVLLLDP+LGTGNSA QAI LL++KG
Sbjct: 363 CCKGIKIGKILIHRDGDNGMQLIYEKLPSDISERHVLLLDPVLGTGNSANQAIELLIQKG 422
Query: 413 VQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTD 472
V E +IIFLNLISAP+G+H V KRFP++KIVTSEID LN++FRVIPG+GEFGDRYFGTD
Sbjct: 423 VPEAHIIFLNLISAPEGIHCVCKRFPKLKIVTSEIDQCLNEEFRVIPGLGEFGDRYFGTD 482
Query: 473 D 473
+
Sbjct: 483 E 483
>AT5G40870.1 | chr5:16375021-16378384 FORWARD LENGTH=487
Length = 486
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/475 (65%), Positives = 378/475 (79%), Gaps = 11/475 (2%)
Query: 10 DEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVE----------NGHQEPFVIGVA 59
D ++ A+G H+S LR + L + + + ++PF+IGV+
Sbjct: 9 DYAMEKASGPHFSGLRFDGLLSSSPPNSSVVSSLRSAVSSSSPSSSDPEAPKQPFIIGVS 68
Query: 60 GGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAFDTELLL 119
GG +SGK+TVC MII QL D RVV+V Q+SFY GL+ EEL V +YNFDHPDAFDTE LL
Sbjct: 69 GGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTSEELQRVQEYNFDHPDAFDTEQLL 128
Query: 120 SCMENLKHGKAVDIPNYNFKTYKSVASA-RKVNPSDVIILEGILVFHDSRVRDLMNMKIF 178
C E LK G+ +P Y+FKT++ + R+VN SDVIILEGILVFHDSRVR+LMNMKIF
Sbjct: 129 HCAETLKSGQPYQVPIYDFKTHQRRSDTFRQVNASDVIILEGILVFHDSRVRNLMNMKIF 188
Query: 179 VDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIIIPRGGDN 238
VDTDADVRL RRIRRDT+E+GRD+ +VL+QY+KFVKPAF+DF+LP+KKYAD+IIPRGGDN
Sbjct: 189 VDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN 248
Query: 239 DVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHDFIFYADRL 298
VA+DLI QHI TKLGQHDLCK++PN+YVIQ+T+QIRGMHT+IR+ + HDF+FY+DRL
Sbjct: 249 HVAVDLITQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIREKDISKHDFVFYSDRL 308
Query: 299 IRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENALRAXXXXXX 358
IRLVVEHGLGHLPF EKQV+TPTG+VYTGV+F K+LCG+S+IRSGESMENALRA
Sbjct: 309 IRLVVEHGLGHLPFTEKQVVTPTGAVYTGVDFCKKLCGVSIIRSGESMENALRACCKGIK 368
Query: 359 XXXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLKKGVQETNI 418
LIHR+GDNGKQLIY +P DI+ RHVLLLDP+L TGNSA QAI LL++KGV E +I
Sbjct: 369 IGKILIHRDGDNGKQLIYEKLPHDISERHVLLLDPVLATGNSANQAIELLIQKGVPEAHI 428
Query: 419 IFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFGTDD 473
IFLNLISAP+G+H V KRFP +KIVTSEID LN +FRVIPG+GEFGDRYFGTD+
Sbjct: 429 IFLNLISAPEGIHCVCKRFPALKIVTSEIDQCLNQEFRVIPGLGEFGDRYFGTDE 483
>AT3G27440.1 | chr3:10155555-10157931 FORWARD LENGTH=466
Length = 465
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/426 (69%), Positives = 368/426 (86%)
Query: 51 QEPFVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHP 110
++PFVIGVAGG +SGK+TVC MI+ QL DQRVV+V Q+SFY+ L+ E+L VH+YNFDHP
Sbjct: 27 KQPFVIGVAGGTASGKTTVCNMIMSQLHDQRVVLVNQDSFYHSLTKEKLNKVHEYNFDHP 86
Query: 111 DAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGILVFHDSRVR 170
DAF+TE+LLSCME L+ G+ V+IP+Y+FK ++S+ S+ VNP DVIILEGILV +D RVR
Sbjct: 87 DAFNTEVLLSCMEKLRSGQPVNIPSYDFKIHQSIESSSPVNPGDVIILEGILVLNDPRVR 146
Query: 171 DLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADI 230
DLMNMKIFVDTDADVRL+RRI+RDT+E+GR+I+ VL+QY+KFVKP+F+++I P+ KYADI
Sbjct: 147 DLMNMKIFVDTDADVRLSRRIQRDTVERGRNIQNVLEQYTKFVKPSFDEYIQPSMKYADI 206
Query: 231 IIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAATTTHD 290
IIPRGGDNDVAIDLIVQHIRTKL QH+LCK++ N+++I +T+QI+GMHT+IRD TT HD
Sbjct: 207 IIPRGGDNDVAIDLIVQHIRTKLCQHNLCKIYSNIFIISSTFQIKGMHTLIRDINTTKHD 266
Query: 291 FIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESMENAL 350
F+FYADRLIRLVVEHGLGHLPF EKQ+ TPTGSVYTGV+F KRLCG+SVIRSGESMENAL
Sbjct: 267 FVFYADRLIRLVVEHGLGHLPFTEKQITTPTGSVYTGVDFCKRLCGVSVIRSGESMENAL 326
Query: 351 RAXXXXXXXXXXLIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQAISLLLK 410
RA LIHRE ++G+QLIY +PKDI++RHV LLDP+L +G SAV+AI+LLL
Sbjct: 327 RACCNGIKIGKILIHRENNDGRQLIYEKLPKDISSRHVFLLDPVLASGYSAVKAITLLLS 386
Query: 411 KGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGEFGDRYFG 470
KGV E++IIFLNLI+APQG+H + K+FP +KIVTSEID LN+D RVIPG+GEF DRYFG
Sbjct: 387 KGVPESHIIFLNLIAAPQGIHALCKKFPMLKIVTSEIDSSLNEDSRVIPGLGEFADRYFG 446
Query: 471 TDDYQS 476
T++ S
Sbjct: 447 TNNINS 452
>AT1G26190.1 | chr1:9057285-9060433 REVERSE LENGTH=675
Length = 674
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 54 FVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAF 113
++GVAG + +GK+ + I++ L V V++ +++ + + D NFD P
Sbjct: 66 ILVGVAGPSGAGKTVFTEKILNFLPS--VAVISMDNY------NDSSRIVDGNFDDPRLT 117
Query: 114 DTELLLSCMENLKHGKAVDIPNYNFKTYKSVA-SARKVNPSDVIILEGILVFHDSRVRDL 172
D + LL +E+LK GK V++P Y+FK+ V V PS ++I+EGI + ++R L
Sbjct: 118 DYDTLLKNLEDLKEGKQVEVPIYDFKSSSRVGYRTLDVPPSRIVIIEGIYALSE-KLRPL 176
Query: 173 MNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIII 232
+++++ V L +R+ RD G+ + ++ Q S+ V P ++ FI P + A I I
Sbjct: 177 LDLRVSVTGGVHFDLVKRVLRDIQRAGQQPEEIIHQISETVYPMYKAFIEPDLQTAQIKI 236
>AT1G32060.1 | chr1:11532668-11534406 FORWARD LENGTH=396
Length = 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 29/203 (14%)
Query: 51 QEPFVIGVAGGASSGKSTVCKMII-----------------DQLRDQRVVVVTQESFY-- 91
QE VIG+A + GKST + + + L V+ + ++
Sbjct: 48 QETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSL 107
Query: 92 --YGLSDEELVHVHDYNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYKSVASARK 149
YG ++++ + P A D +L+ ++ LK+G AV+ P YN T +
Sbjct: 108 DRYGRKEQKVTALD------PRANDFDLMYEQVKALKNGIAVEKPIYNHVT-GLLDPPEL 160
Query: 150 VNPSDVIILEGILVFHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQY 209
+ P ++++EG+ D RVRDL++ I++D +V+ +I+RD E+G ++++
Sbjct: 161 IQPPKILVIEGLHPMFDERVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI 220
Query: 210 SKFVKPAFEDFILPTKKYADIII 232
KP F+ FI P K+YAD +I
Sbjct: 221 EA-RKPDFDAFIDPQKQYADAVI 242
>AT1G73980.1 | chr1:27820292-27823527 REVERSE LENGTH=644
Length = 643
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 54 FVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNFDHPDAF 113
++G+AG + +GK+ + I++ + + ++ +++ G V D NFD P
Sbjct: 66 ILVGLAGPSGAGKTIFTEKILNFM--PSIAIINMDNYNDG------TRVIDGNFDDPRLT 117
Query: 114 DTELLLSCMENLKHGKAVDIPNYNFKTYKSVA-SARKVNPSDVIILEGILVFHDSRVRDL 172
D + LL + L+ GK V +P Y+FK+ + +V S ++ILEGI + ++R L
Sbjct: 118 DYDTLLDNIHGLRDGKPVQVPIYDFKSSSRIGYRTLEVPSSRIVILEGIYALSE-KLRPL 176
Query: 173 MNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKKYADIII 232
+++++ V L +R+ RD G++ + ++ Q S+ V P ++ FI P K A I I
Sbjct: 177 LDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAQIKI 236
>AT3G53900.2 | chr3:19956914-19959006 REVERSE LENGTH=297
Length = 296
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 274 IRGMHTIIRDAATTTHDFIFYADRLIRLVV-EHGLGHLPFKEKQVITPTGSVYTGVEF-- 330
I+ +++R+ T F L RL++ E LP ++++P G VEF
Sbjct: 89 IKHWISVLRNEQTPCPVFRNAIAELGRLLMYEASREWLPTVVGEIMSPMGP--ASVEFID 146
Query: 331 -SKRLCGISVIRSGESMENALRAXXXXXXXXXXLIHREGDNGKQLIYHN-VPKDIA-NRH 387
+ + + ++R+G ++ + + R+ +Y N +P + N
Sbjct: 147 PREPIAVVPILRAGLALAEHASSVLPANKIYHLGVSRDEKTLLPSVYLNKLPDEFPKNSR 206
Query: 388 VLLLDPILGTGNSAVQAISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEI 447
V L+DP+L TG + + A+ LL ++G+ I + I+AP + ++++FP + + I
Sbjct: 207 VFLVDPVLATGGTIMAAMDLLKERGLSVQQIKVICAIAAPPALSKLNEKFPGLHVYAGII 266
Query: 448 DFGLNDDFRVIPGMGEFGDRYFGTDDYQ 475
D +N+ +IPG+G+ GDR FGT+ +
Sbjct: 267 DPEVNEKGYIIPGLGDAGDRSFGTETHW 294
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.139 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,836,732
Number of extensions: 470008
Number of successful extensions: 1116
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1107
Number of HSP's successfully gapped: 9
Length of query: 491
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 388
Effective length of database: 8,282,721
Effective search space: 3213695748
Effective search space used: 3213695748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)