BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0264500 Os11g0264500|Os11g0264500
(545 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67550.1 | chr5:26946908-26949112 REVERSE LENGTH=510 186 3e-47
AT1G71110.1 | chr1:26818244-26820852 FORWARD LENGTH=558 115 8e-26
AT2G12400.1 | chr2:5005144-5008140 REVERSE LENGTH=542 110 2e-24
AT2G25270.1 | chr2:10759779-10762358 FORWARD LENGTH=546 101 1e-21
AT1G80540.1 | chr1:30281638-30284258 REVERSE LENGTH=539 78 1e-14
>AT5G67550.1 | chr5:26946908-26949112 REVERSE LENGTH=510
Length = 509
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 195/440 (44%), Gaps = 27/440 (6%)
Query: 41 MTNRSDSTLSRRIRRVDPLDGLRKYEGGYNITNKHYWSSTIFTGRPGYVIAALWLIGGII 100
+++ SD R +R DPL+ R Y+GG+N+ NKHYW++T FTG GY +A + +I GI
Sbjct: 25 VSSLSDGGDHERFKRRDPLNSFRYYDGGFNVRNKHYWAATAFTGIHGYAVAGVLIIVGI- 83
Query: 101 FVGALLISKIFFAKRNTGYGDMNYFLARFHICSMIIFXXXXXXXXXXXXXXXRGAVRFHS 160
L + F KR +L R+++ ++ R +
Sbjct: 84 ---CLGLYVAFSDKRRRVSSTRRRYLDRYYLPLFLLLLLFMFLSVVTTGIVIAANQRSKN 140
Query: 161 RAEAVKEIIGRTALEATATIYNITEAIEKMQNTSRLYNNNSQAFDHLNSTVKALNSEAVE 220
R E +KE I + + I + ++ K+Q Y+ N+ LN T L +
Sbjct: 141 RTEEMKETIDKAGEDVNQNIRTVIVSLTKIQYLLLPYDQNTTHL--LNVTTHRLGKGSRL 198
Query: 221 IQSKAEKNMRLVSKGINILEAVTILTVTLNLFAVLALLVMRPLRLQKLCNLCIAICWILT 280
IQS R + I I ++ + NLF +L + L + I +CWI+T
Sbjct: 199 IQSFLHHKGRSIDLAIKISYVSHLMITSTNLFLLLLAFLPLLLHWHPGFIMVIFLCWIIT 258
Query: 281 ALIWMYFGLYYFLDEFAGDTCAALEEYQLDPKNSTLGTIIPCSEKFSGSVILHDVGAGIH 340
L W+ G +F+ FA D C+A + +P+NSTL + PC + L ++ IH
Sbjct: 259 TLCWVLTGFDFFIHTFAEDLCSAFNGFVQNPRNSTLTNLFPCMDPLHSDKTLIEISLMIH 318
Query: 341 DIIDQVN---------------SNIYTIKSEYGVKQLDYICNPFAGPPEFRYRPENCPSG 385
+ I Q+N SN + E G+ IC+PF G Y P++C +G
Sbjct: 319 NFITQLNSKVAESMRSNALTDRSNTVSWAPESGI-----ICDPFVGQQINSYTPQSCSNG 373
Query: 386 AATIGDIPQILRRLTCTDLGGGAHC-APAELSSAIDYGKVETYTSSIQNMLDIFPGTERL 444
A IG+ P IL R TC D C + Y KV Y++S Q MLDI P + L
Sbjct: 374 AIPIGEFPNILSRFTCHDKDPPETCRITGKFIPEAAYLKVYAYSNSAQGMLDILPSFQNL 433
Query: 445 LTCELVESGFADIVGRQCAP 464
C V+ + IV QC P
Sbjct: 434 TECLAVKDTLSSIVSNQCDP 453
>AT1G71110.1 | chr1:26818244-26820852 FORWARD LENGTH=558
Length = 557
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 174/416 (41%), Gaps = 53/416 (12%)
Query: 50 SRRIRRVDPLDGLRKYEGGYNITNKHYWSSTIFTGRPGYVIAALWLIGGIIFVGALLISK 109
+ R +R D L + Y GG+NITN HYW+S FTG PG+++A +WL+ G+LL+
Sbjct: 70 AHRTKRPDILRAFKPYHGGWNITNNHYWASVGFTGAPGFILAVIWLLS----FGSLLVVY 125
Query: 110 IFFAKRNTGYGDMNYFLARFHICSMIIFXXXXXXXXXXXXXXXRGAVRFHSRAEAVKEII 169
F R + F R IC I+ G +FH+ A + +
Sbjct: 126 HCFKWRICDKAKGSSFDTR-RIC-FILLIVFTCVAAVGCILLSVGQDKFHTEAMHTLKYV 183
Query: 170 GRTALEATATIYNITE--AIEKMQNTSRLY--NNNSQAFDHLNSTVKALNSEAVEIQSKA 225
+ + N+T+ ++ K N +++ ++ D LN LN+ AV +
Sbjct: 184 VNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDVMGEIDKLNVN---LNTAAVTLGETT 240
Query: 226 EKNMRLVSKGINILEAVTILTVTLNLFAVLALLVMRPLRLQKLCNLCIAICWILTALIWM 285
N + + + + I T+ L L++ LR Q + ++ + WIL A+ ++
Sbjct: 241 TDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVLRHQHVVHIFVVSGWILVAVTFV 300
Query: 286 YFGLYYFLDEFAGDTCAALEEYQLDPKNST-LGTIIPCSEKFSGSVILHDVGAGIHDIID 344
G++ L+ DTC A++E+ +P T L +I+PC ++ + + L I+ I+
Sbjct: 301 LCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPCVDQQTTNQTLSQSKVVINSIVT 360
Query: 345 QVNSNIYTIKSEYGVKQLDYICNPFAGPPEFRYRPENCPSGAATIGDIPQILRRLTCTDL 404
VN+ +Y + + D N +GPP P C A + D
Sbjct: 361 VVNTFVYAVANTNPAPGQDRYYNQ-SGPP----MPPLCIPFDANMED------------- 402
Query: 405 GGGAHCAPAELSSAIDYGKVETYTSSIQNMLDIFPGTERLLTCELVESGFADIVGR 460
C+P ELS +E +S +N CE+ SG VGR
Sbjct: 403 ---RQCSPWELS-------IENASSVWENY-----------KCEVTPSGICTTVGR 437
>AT2G12400.1 | chr2:5005144-5008140 REVERSE LENGTH=542
Length = 541
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 183/448 (40%), Gaps = 31/448 (6%)
Query: 33 AVGRILSEMTNRSDSTL--SRRIRRVDPLDGLRKYEGGYNITNKHYWSSTIFTGRPGYVI 90
+ R+++E + + S + ++R RR DP D + Y GG+NI+N HY +S +T P +I
Sbjct: 50 VIERVIAEESGENSSLILAAKRTRRKDPADNFKLYTGGWNISNSHYLTSVGYTAAPFIII 109
Query: 91 AALWLIGGIIFVGALLISKIFFAKRNTGYGDMNYFLARFHICSMIIFXXXXXXXXXXXXX 150
A +W + + + + + A+++ GY + Y L S+I+
Sbjct: 110 ALVWFVFFGLSLSLICLCYCCCARQSYGYSRVAYAL------SLILLISFTIAAIIGCVF 163
Query: 151 XXRGAVRFHSRAEAVKEIIGRTALEATATIYNITE---AIEKMQNTSRLYNNNSQAFDHL 207
G +FH+ + + A + + N+++ A +K+ S + + +
Sbjct: 164 LYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQD--VLSSI 221
Query: 208 NSTVKALNSEAVEIQSKAEKNMRLVSKGINILEAVTILTVTLNLFAVLALLVMRPLRLQK 267
++ +NS A + K +N + ++I+ ++ + LF ++ LQ
Sbjct: 222 DNIQGKINSSATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSIFGLQC 281
Query: 268 LCNLCIAICWILTALIWMYFGLYYFLDEFAGDTCAALEEYQLDPKNST-LGTIIPCSEKF 326
L + + WIL + ++ G + L GDTC A++++ +P T L I+PC +
Sbjct: 282 LVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDNA 341
Query: 327 SGSVILHD---VGAGIHDIIDQVNSNIYTIKSEYGVKQLDY---------ICNPFAGPPE 374
+ L V + +++D SN+ + L Y +CNPF
Sbjct: 342 TARETLTRTKLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPFNADLS 401
Query: 375 FRYRPENCPSGAATIGDIPQILRRLTCTDLGGGAHCAPAELSSAIDYGKVETYTSSIQNM 434
R C G + + ++ + TC + G P L+ + Y ++ + +
Sbjct: 402 DR----QCQPGQVHLNNATEVWKNFTCQIVTPGTCSTPGRLTPKL-YSQMAAAVNVSYGL 456
Query: 435 LDIFPGTERLLTCELVESGFADIVGRQC 462
P L C+ V S F DI C
Sbjct: 457 YKYGPFLADLQGCDFVRSTFTDIERDHC 484
>AT2G25270.1 | chr2:10759779-10762358 FORWARD LENGTH=546
Length = 545
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 168/430 (39%), Gaps = 31/430 (7%)
Query: 50 SRRIRRVDPLDGLRKYEGGYNITNKHYWSSTIFTGRPGYVIAALWLIGGIIFVGALLISK 109
++R R DPL+G KY GG+NI+N+HYW+S +T P +V+AA+W +G I + + +
Sbjct: 74 AQRTYRKDPLNGFEKYTGGWNISNQHYWASVSYTAVPLFVLAAVWFLGFGICLLVICMCH 133
Query: 110 IFFAKRNTGYGDMNYFLARFHICSMIIFXXXXXXXXXXXXXXXRGAVRFHSRAEAVKEII 169
I + GY + Y + S+I G +R++ E +
Sbjct: 134 ICHRTNSVGYSKVAY------VVSLIFLLIFTVIAIIGCVLLYSGQIRYNKSTTETLEYV 187
Query: 170 GRTALEATATIYNITEAIEKMQNTSRLY----NNNSQAFDHLNSTVKALNSEAVEIQSKA 225
A + + I++ + + + L N D + VK L+S I K+
Sbjct: 188 MSQADSTISQLRAISDYLASAKQAAVLQVLLPANVQTEIDQIG--VK-LDSSVATITEKS 244
Query: 226 EKNMRLVSKGINILEAVTILTVTLNLFAVLALLVMRPLRLQKLCNLCIAICWILTALIWM 285
+ + ++ + I+ + L LV +Q + + + WIL ++
Sbjct: 245 TNSSNHIRHFLDSVRVALIVVSIVMLVVTFLGLVSSIFGMQVIVYTLVILGWILVTGTFI 304
Query: 286 YFGLYYFLDEFAGDTCAALEEYQLDP-KNSTLGTIIPCSEKFSGSVIL---HDVGAGIHD 341
G + L DTC A+ E+ P N+ L I+PC++ + L +V + +
Sbjct: 305 LSGTFLVLHNATADTCVAMSEWVERPSSNTALDEILPCTDNATAQETLMRSREVTGQLVE 364
Query: 342 IIDQVNSNIYTIKSEYGVKQLDY---------ICNPFAGPPEFRYRPENCPSGAATIGDI 392
+I+ V +N+ I + Y +CNPF +C G + +
Sbjct: 365 LINTVITNVSNINFSPVFVPMYYNQSGPLLPLLCNPF----NHDLTDRSCSPGDLDLNNA 420
Query: 393 PQILRRLTCTDLGGGAHCAPAELSSAIDYGKVETYTSSIQNMLDIFPGTERLLTCELVES 452
+ C G L+ A+ Y ++ + + ++ P +L C +
Sbjct: 421 TEAWTSFVCQVSQNGTCTTTGRLTPAL-YSQMASGVNISTGLIRDAPFLVQLQDCSYAKQ 479
Query: 453 GFADIVGRQC 462
F DI C
Sbjct: 480 TFRDITNDHC 489
>AT1G80540.1 | chr1:30281638-30284258 REVERSE LENGTH=539
Length = 538
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 158/438 (36%), Gaps = 43/438 (9%)
Query: 50 SRRIRRVDPLDGLRKYEGGYNITNKHYWSSTIFTGRPGYVIAALW--LIGGIIFVGALLI 107
+ R +R DPL+ Y G+N+TN HY +S F+ P VIA W L+G + L
Sbjct: 68 AERTQRPDPLNHFNIYVDGWNVTNSHYIASVGFSAVPFIVIAIAWFVLLGLFLICSCLCC 127
Query: 108 SKIFFAKRNTGYGDMNYFLARFHICSMIIFXXXXXXXXXXXXXXXRGAVRFHSRAEAVKE 167
+RN GY + Y L S++ G F+ E
Sbjct: 128 CCCGCGRRNYGYSRVCYTL------SLVFLLLFTIAAVIGSAMLYTGQNEFYGSVERTFM 181
Query: 168 IIGRTALEATATIYNITEAIEKMQNTSRLYNNNSQAF--------DHLNSTVKALNSEAV 219
I + +AT + +T + +Q+ + + F DH N+ +K S
Sbjct: 182 YIVK---QATGVLTKLTSLWDSIQSAKDIQLDGHNLFPPEFRGNIDHFNNMIKM--SNIT 236
Query: 220 EIQSKAEKNMRLVSKGINILEAVTILTVTLNLFAVLALLVMRPLRLQKLCNLCIAICWIL 279
A + +R ++ +N + V + + L L+ L+ L L + + WIL
Sbjct: 237 YPDRVANQTIRYLTGALNPVRYVLNVIAGVMLAVAFLGLLFSFCGLRVLVYLLVILGWIL 296
Query: 280 TALIWMYFGLYYFLDEFAGDTCAALEEYQLDP-KNSTLGTIIPCSEKFSGSVILHDVGAG 338
+ ++ DTC A++++ DP +S L ++PC + + L
Sbjct: 297 VTATILLSAVFLVFHNVVADTCMAMDQWVHDPAADSALSQLLPCLDPKTIGETLDITKTM 356
Query: 339 IHDIIDQVNSNIYTI----------KSEYGVKQ----LDYICNPFAGPPEFRYRPENCPS 384
+D N+ YT+ + + Q + +CNP + ++P C
Sbjct: 357 TATAVDMTNA--YTVNVSNHDQFPPNAPFYHNQSGPLVPLLCNPL----DQNHKPRPCAP 410
Query: 385 GAATIGDIPQILRRLTCTDLGGGAHCAPAELSSAIDYGKVETYTSSIQNMLDIFPGTERL 444
+ + Q+ + C G L+ Y ++ + + P +
Sbjct: 411 DEVLLANASQVYKGYICQVNAEGICTTQGRLTQG-SYDQMMGAINVAFTLDHYGPFLASI 469
Query: 445 LTCELVESGFADIVGRQC 462
C V F DI + C
Sbjct: 470 ADCTFVRDTFRDITTKNC 487
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,613,470
Number of extensions: 371582
Number of successful extensions: 917
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 907
Number of HSP's successfully gapped: 5
Length of query: 545
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 442
Effective length of database: 8,282,721
Effective search space: 3660962682
Effective search space used: 3660962682
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)