BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0244800 Os11g0244800|AK103215
(254 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14510.1 | chr1:4962171-4964154 REVERSE LENGTH=253 306 8e-84
AT2G02470.1 | chr2:652837-654621 FORWARD LENGTH=257 303 5e-83
AT5G20510.1 | chr5:6939991-6942846 REVERSE LENGTH=261 293 6e-80
AT3G42790.1 | chr3:14878128-14879618 REVERSE LENGTH=251 284 3e-77
AT5G26210.1 | chr5:9158566-9160221 REVERSE LENGTH=256 261 3e-70
AT5G05610.1 | chr5:1677331-1678942 REVERSE LENGTH=242 236 7e-63
AT3G11200.1 | chr3:3508387-3510418 REVERSE LENGTH=247 224 4e-59
>AT1G14510.1 | chr1:4962171-4964154 REVERSE LENGTH=253
Length = 252
Score = 306 bits (783), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 168/243 (69%), Gaps = 3/243 (1%)
Query: 8 RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWXXXXXXXXXXX 67
RT E+VF DFR RRAG+IKAL+TDV+KFY QCDPEKENLCLYGLPNETW
Sbjct: 10 RTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVPP 69
Query: 68 XXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINN 127
GINFARDGM EKDW+SLVAVHSD+WL++VAFYFGARFGF K RKRLF MIN+
Sbjct: 70 ELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIND 129
Query: 128 LPTIYEVVTGTAKKQSKEXXXXXXXXXXXXXXXXXRQPEPNSRGPKMPPPKXXXXXXXXX 187
LPTI+EVVTG A KQSK+ R E +++ KM PP
Sbjct: 130 LPTIFEVVTGNA-KQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPP--RKEDESG 186
Query: 188 XXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSS 247
+CGACGDNYG DEFWICCDACE WFHGKCVKITPAKAEHIKHYKCP+C++
Sbjct: 187 DEDEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCTT 246
Query: 248 SSK 250
S K
Sbjct: 247 SKK 249
>AT2G02470.1 | chr2:652837-654621 FORWARD LENGTH=257
Length = 256
Score = 303 bits (776), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 156/249 (62%), Positives = 168/249 (67%), Gaps = 6/249 (2%)
Query: 8 RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWXXXXXXXXXXX 67
RT E+VF DFR RRAG+IKALT D+ KFYQ CDPEKENLCLYGLPNETW
Sbjct: 10 RTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEVNLPVEEVPP 69
Query: 68 XXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINN 127
GINFARDGM EKDW+SLVAVHSD+WLL+VAFYFGARFGF K RKRLF MIN
Sbjct: 70 ELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINE 129
Query: 128 LPTIYEVVTGTAKKQSKEXXXXXXXXXXXXXXXXXRQPEPNSRGPKM--PPPK-XXXXXX 184
LPTI+EVV+G A KQSK+ RQ E S+ KM PPPK
Sbjct: 130 LPTIFEVVSGNA-KQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPKEEEEEED 188
Query: 185 XXXXXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPN 244
+CGACGDNYG DEFWICCDACE WFHGKCVKITPAKAEHIKHYKCP
Sbjct: 189 ESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPT 248
Query: 245 CSSSSKRAR 253
C S+KRAR
Sbjct: 249 C--SNKRAR 255
>AT5G20510.1 | chr5:6939991-6942846 REVERSE LENGTH=261
Length = 260
Score = 293 bits (750), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/261 (56%), Positives = 168/261 (64%), Gaps = 10/261 (3%)
Query: 1 MDGGGAH---RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWX 57
M+GG AH RT E+VFRDF+ RRAG+I+ALTTDVE F+QQCDPEK+NLCLYG PNE W
Sbjct: 1 MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60
Query: 58 XXXXXXXXXXXXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKES 117
GINFARDGM E++WLSLVAVHSD WLL+V+FYFG+RFGFD+
Sbjct: 61 VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120
Query: 118 RKRLFSMINNLPTIYEVVTGTAKKQSKEX-XXXXXXXXXXXXXXXXRQPEPNS----RGP 172
RKRLFSMIN +PT+YEVVTG A+KQ+KE R E S
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180
Query: 173 KMPPPKXXXXXXXXXXXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPA 232
TLCGACGDNY DEFWICCD CE WFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240
Query: 233 KAEHIKHYKCPNCSSSSKRAR 253
+AEHIKHYKCP C S+KRAR
Sbjct: 241 RAEHIKHYKCPTC--SNKRAR 259
>AT3G42790.1 | chr3:14878128-14879618 REVERSE LENGTH=251
Length = 250
Score = 284 bits (727), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/257 (56%), Positives = 168/257 (65%), Gaps = 10/257 (3%)
Query: 1 MDGGGAH---RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWX 57
M+GG A RT E+VF+DF+ RR ++KALTTDV++FYQQCDPEKENLCLYGLPNE W
Sbjct: 1 MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60
Query: 58 XXXXXXXXXXXXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKES 117
GINFARDG+ EK+WLSLVA+HSD WLL+V+FYFG+RF F KE
Sbjct: 61 VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120
Query: 118 RKRLFSMINNLPTIYEVVTGTAKKQSKEXXXXXXXXXXXXXXXXXRQPEPNSRGPKMPPP 177
RKRLF+MIN++PTI+EVVTG AK + K R E S K P
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAKAKDK-SSAANQNGNKSKSNSKVRTSEGKSSKTKQPKE 179
Query: 178 KXXXXXXXXXXXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHI 237
+ TLCGACGD+ G DEFWICCD CE WFHGKCVKITPA+AEHI
Sbjct: 180 EDEEIDEDDEDDHG----ETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 235
Query: 238 KHYKCPNCSSSSKRARA 254
K YKCP+C S+KRARA
Sbjct: 236 KQYKCPSC--SNKRARA 250
>AT5G26210.1 | chr5:9158566-9160221 REVERSE LENGTH=256
Length = 255
Score = 261 bits (666), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/258 (58%), Positives = 173/258 (67%), Gaps = 7/258 (2%)
Query: 1 MDGGGAH--RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWXX 58
M+ GGA+ RT E+VFRDF+ RRAGMIKALTTDV++F++ CDPEKENLCLYG PNE W
Sbjct: 1 MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60
Query: 59 XXXXXXXXXXXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESR 118
GINFARDGM EKDWLSLVAVHSD WLLAVAF+FGARFGFDK R
Sbjct: 61 NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120
Query: 119 KRLFSMINNLPTIYEVVTGTAKKQSKEXXXXXXXXXXXXXXXXXRQPEPNSRGPKMPPPK 178
KRLF+M+N+LPTI+EVV GTAKKQ K+ R E ++ K P PK
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSK-PEPK 179
Query: 179 --XXXXXXXXXXXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEH 236
T CGACG++Y DEFWICCD CE WFHGKCVKITPA+AEH
Sbjct: 180 DDEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEH 239
Query: 237 IKHYKCPNCSSSSKRARA 254
IK YKCP+C S+KRAR+
Sbjct: 240 IKQYKCPSC--SNKRARS 255
>AT5G05610.1 | chr5:1677331-1678942 REVERSE LENGTH=242
Length = 241
Score = 236 bits (603), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 145/244 (59%), Gaps = 12/244 (4%)
Query: 8 RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWXXXXXXXXXXX 67
RT E++F+DF RR+G ++AL+ DV+KFY CDPE ENLCLYG PN TW
Sbjct: 9 RTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAEEVPP 68
Query: 68 XXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINN 127
GINFARDGM KDWLSLVAVHSD WLL+V+ YFGAR ++ RKRLFS+IN+
Sbjct: 69 ELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERKRLFSLIND 126
Query: 128 LPTIYEVVTGTAKKQSKEXXXXXXXXXXXXXXXXXRQPEPNSRGPKMPPPKXXXXXXXXX 187
LPT++EVVTG +K K+ PK+
Sbjct: 127 LPTLFEVVTG--RKPIKDGKPSMDLGSKSRNGVKRSIEGQTKSTPKL--------MEESY 176
Query: 188 XXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSS 247
+TLCG+CG NY DEFWICCD CE W+HGKCVKITPAKAE IK YKCP+C +
Sbjct: 177 EDEDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSCCT 236
Query: 248 SSKR 251
R
Sbjct: 237 KKGR 240
>AT3G11200.1 | chr3:3508387-3510418 REVERSE LENGTH=247
Length = 246
Score = 224 bits (570), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/245 (50%), Positives = 151/245 (61%), Gaps = 11/245 (4%)
Query: 8 RTPEDVFRDFRARRAGMIKALTTDVEKFYQQCDPEKENLCLYGLPNETWXXXXXXXXXXX 67
RT E++F+D+ ARRA +++ALT DV+ FY QCDPEKENLCLYG PNE+W
Sbjct: 11 RTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEVPP 70
Query: 68 XXXXXXXGINFARDGMDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINN 127
GINFARDGM KDWLSLVAVHSD WLL+V+FYFGAR ++ RKRLFS+IN+
Sbjct: 71 ELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGAR--LNRNERKRLFSLIND 128
Query: 128 LPTIYEVVTG-TAKKQSKEXXXXXXXXXXXXXXXXXRQPEPNSRGPKMPPPKXXXXXXXX 186
LPT+++VVTG A K +K Q + S PK+
Sbjct: 129 LPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRSIDGQTK--SSTPKL------MEESYE 180
Query: 187 XXXXXXXXXNTLCGACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCS 246
+TLCG+CG +Y +EFWICCD CE W+HGKCVKITPAKAE IK YKCP C
Sbjct: 181 EEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPCC 240
Query: 247 SSSKR 251
+ R
Sbjct: 241 AKKGR 245
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,162,828
Number of extensions: 178672
Number of successful extensions: 617
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 614
Number of HSP's successfully gapped: 11
Length of query: 254
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 158
Effective length of database: 8,474,633
Effective search space: 1338992014
Effective search space used: 1338992014
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)