BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0243300 Os11g0243300|Os11g0243300
(383 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14440.1 | chr1:4939076-4940014 REVERSE LENGTH=313 105 3e-23
AT2G02540.1 | chr2:684302-685234 FORWARD LENGTH=311 102 3e-22
AT1G75240.1 | chr1:28241576-28242505 FORWARD LENGTH=310 101 7e-22
AT4G24660.1 | chr4:12724851-12725513 REVERSE LENGTH=221 97 1e-20
AT5G65410.1 | chr5:26136179-26137018 FORWARD LENGTH=280 92 5e-19
AT2G18350.1 | chr2:7971122-7971910 REVERSE LENGTH=263 89 3e-18
AT1G74660.1 | chr1:28047742-28048050 REVERSE LENGTH=103 86 3e-17
AT3G50890.1 | chr3:18916420-18917169 FORWARD LENGTH=250 85 8e-17
AT5G15210.1 | chr5:4937874-4938689 REVERSE LENGTH=272 84 1e-16
AT3G28920.1 | chr3:10940598-10941536 REVERSE LENGTH=313 83 3e-16
AT1G69600.1 | chr1:26182470-26183198 FORWARD LENGTH=243 80 1e-15
AT3G28917.1 | chr3:10925014-10925316 FORWARD LENGTH=101 79 4e-15
AT5G39760.1 | chr5:15911543-15912547 FORWARD LENGTH=335 78 8e-15
AT1G18835.1 | chr1:6496106-6496372 REVERSE LENGTH=89 74 9e-14
AT5G60480.1 | chr5:24323594-24324169 FORWARD LENGTH=192 74 1e-13
AT5G42780.1 | chr5:17154841-17155569 FORWARD LENGTH=243 71 1e-12
AT1G14687.1 | chr1:5048046-5048552 FORWARD LENGTH=169 57 1e-08
>AT1G14440.1 | chr1:4939076-4940014 REVERSE LENGTH=313
Length = 312
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEAD 196
Y+ECLKNHAAA+GGNATDGCGEFMPSGE+GS+EAL CSAC CHRNFHRKE +
Sbjct: 90 YKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVE 141
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 267 QIIMPLN------MIHTSES-DEMDXXXXXXXXXXXXXXXXXXXXXFRTKFTAEQKARML 319
Q+IMP+ M + SES D M+ FRTKFT EQK +ML
Sbjct: 175 QMIMPIGVSNYRYMHNNSESEDFMEEDGVTTASRSLPNLPYNQKKRFRTKFTPEQKEKML 234
Query: 320 EFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FAE+VGW++Q+ +D +V FC+EIGVKRRVLK
Sbjct: 235 SFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLK 267
>AT2G02540.1 | chr2:684302-685234 FORWARD LENGTH=311
Length = 310
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 46/52 (88%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEAD 196
Y+ECLKNHAA +GGNA DGCGEFMPSGEEGS+EAL CS C CHRNFHR+E +
Sbjct: 87 YKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETE 138
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKFT EQK +M+ FAERVGW++Q+ ++++V CQEIG++RRVLK
Sbjct: 225 FRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLK 271
>AT1G75240.1 | chr1:28241576-28242505 FORWARD LENGTH=310
Length = 309
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEAD 196
YRECLKNHAA++GG+ DGCGEFMPSGEEG++EAL+C+AC CHRNFHRKE D
Sbjct: 76 YRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMD 127
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKFT +QK RM++FAE++GWR+ K D+ + FC EIGVKR+V K
Sbjct: 243 FRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFK 289
>AT4G24660.1 | chr4:12724851-12725513 REVERSE LENGTH=221
Length = 220
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 48/54 (88%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEADDL 198
YRECLKNHA IGG+A DGC EFMPSGE+G+L+ALKC+ACGCHRNFHRKE + +
Sbjct: 49 YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESI 102
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKFTAEQK +ML FAER+GWR+QK DD V FC E GV+R+VLK
Sbjct: 160 FRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLK 206
>AT5G65410.1 | chr5:26136179-26137018 FORWARD LENGTH=280
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKE 194
+RECLKN A IGG+A DGCGEFMP+G EG+++ALKC+ACGCHRNFHRKE
Sbjct: 75 FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKE 124
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 307 RTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
RTKFTAEQK RML AER+GWR+Q+ DD ++ FCQE GV R+VLK
Sbjct: 195 RTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLK 240
>AT2G18350.1 | chr2:7971122-7971910 REVERSE LENGTH=263
Length = 262
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 45/54 (83%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEADDL 198
YREC KNHAA+ GG+ DGCGEFM SGEEG++E+L C+AC CHR+FHRKE D L
Sbjct: 82 YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGL 135
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKF EQK +M+EFAE++GWR+ KL+D V+ FC+EI VKR+V K
Sbjct: 201 FRTKFNEEQKEKMMEFAEKIGWRMTKLEDDEVNRFCREIKVKRQVFK 247
>AT1G74660.1 | chr1:28047742-28048050 REVERSE LENGTH=103
Length = 102
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEAD 196
Y EC KNHAA IGG A DGC EFM +G EG+++AL+C+ACGCHRNFHRKE D
Sbjct: 39 YVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEVD 90
>AT3G50890.1 | chr3:18916420-18917169 FORWARD LENGTH=250
Length = 249
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKE 194
YREC KNHAA+ GG+ DGC EFM GEEG+L ALKC+AC CHR+FHRKE
Sbjct: 60 YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKE 109
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 308 TKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
TK EQK +M EFAER+GWR+QK D+ + FC+ + ++R+V K
Sbjct: 186 TKINEEQKEKMKEFAERLGWRMQKKDEEEIDKFCRMVNLRRQVFK 230
>AT5G15210.1 | chr5:4937874-4938689 REVERSE LENGTH=272
Length = 271
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLE--ALKCSACGCHRNFHRKEAD 196
Y+ECLKNHAA IGG+A DGCGEFMPS S + +L C+ACGCHRNFHR+E D
Sbjct: 56 YKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREED 109
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKF+ QK +M EF+ERVGWR+ K DD +V FC+EIGV + V K
Sbjct: 182 FRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKEFCREIGVDKSVFK 228
>AT3G28920.1 | chr3:10940598-10941536 REVERSE LENGTH=313
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFM--PSGEEGSLEALKCSACGCHRNFHRKEADDLDA 200
Y+ECLKNHAAAIGG+A DGCGEFM PS +LKC+ACGCHRNFHR+E DD A
Sbjct: 52 YKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSA 109
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKF++ QK +M EFA+R+GW++QK D+ V FC+EIGV + VLK
Sbjct: 195 FRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIGVDKGVLK 241
>AT1G69600.1 | chr1:26182470-26183198 FORWARD LENGTH=243
Length = 242
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLE--ALKCSACGCHRNFHRKEADD 197
Y+ECLKNHAA +GG+A DGCGEFMPS S + +L+C+ACGCHRNFHR++ +
Sbjct: 31 YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSE 85
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 307 RTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
RTKFT EQK +M FAE+ GW++ D+ V FC E+G++R VLK
Sbjct: 160 RTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIERGVLK 205
>AT3G28917.1 | chr3:10925014-10925316 FORWARD LENGTH=101
Length = 100
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPS-GEEGSLEALKCSACGCHRNFHRKEAD 196
Y EC KNHAAA+GG A DGC EFM S GEEG++ AL C+ACGCHR+FHR+E +
Sbjct: 33 YGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHRSFHRREIE 85
>AT5G39760.1 | chr5:15911543-15912547 FORWARD LENGTH=335
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFM--PSGEEGSLEALKCSACGCHRNFHRKEADDLDADS 202
Y+ECLKNHAAA+GG+A DGCGEFM PS +LKC+ACGCHRNFHR++ D+ + S
Sbjct: 56 YKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDSS 115
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 306 FRTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
FRTKF+ QK +M EFAERVGW++QK D+ V FC++IGV + VLK
Sbjct: 203 FRTKFSQFQKEKMHEFAERVGWKMQKRDEDDVRDFCRQIGVDKSVLK 249
>AT1G18835.1 | chr1:6496106-6496372 REVERSE LENGTH=89
Length = 88
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKCSACGCHRNFHRKEAD 196
Y EC KNHAA IGG A DGC EFM SG + +AL C+ACGCHRNFHR+E D
Sbjct: 26 YVECQKNHAANIGGYAVDGCREFMASGGD---DALTCAACGCHRNFHRREVD 74
>AT5G60480.1 | chr5:24323594-24324169 FORWARD LENGTH=192
Length = 191
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPSGEE--GSLEALKCSACGCHRNFHRKEADD 197
Y ECLKNHA ++GG+A DGCGEF P +L+C ACGCHRNFHR+ D
Sbjct: 5 YNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCHRNFHRRSPSD 59
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 307 RTKFTAEQKARMLEFAERVGWRLQKLDDAMVHHFCQEIGVKRRVLK 352
RTKFTAEQK +M FAER GW++ D+ V FC E+G++R+VLK
Sbjct: 119 RTKFTAEQKVKMRGFAERAGWKINGWDEKWVREFCSEVGIERKVLK 164
>AT5G42780.1 | chr5:17154841-17155569 FORWARD LENGTH=243
Length = 242
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
Query: 145 YRECLKNHAAAIGGNATDGCGEFMPS-GEEGSLEALKCSACGCHRNFHRKE 194
Y EC KNHAA IG A DGCGEF+ S GEE S L C+ACGCHRNFHR+E
Sbjct: 64 YYECRKNHAADIGTTAYDGCGEFVSSTGEEDS---LNCAACGCHRNFHREE 111
>AT1G14687.1 | chr1:5048046-5048552 FORWARD LENGTH=169
Length = 168
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
Query: 145 YRECLKNHAAAIGGNATDGCGEF-MPSGEEGSLEALKCSACGCHRNFHRK 193
YREC++NHAA +G A DGC E+ PS G L C ACGCHR++HR+
Sbjct: 7 YRECMRNHAAKLGSYAIDGCREYSQPS--TGDL----CVACGCHRSYHRR 50
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,030,819
Number of extensions: 142786
Number of successful extensions: 310
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 301
Number of HSP's successfully gapped: 29
Length of query: 383
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 283
Effective length of database: 8,364,969
Effective search space: 2367286227
Effective search space used: 2367286227
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)