BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0241700 Os11g0241700|AK068339
(153 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168 99 1e-21
AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167 99 1e-21
AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155 91 2e-19
AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182 84 3e-17
AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176 78 2e-15
AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150 76 5e-15
AT5G19590.1 | chr5:6611614-6612069 REVERSE LENGTH=152 66 9e-12
AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162 63 7e-11
AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170 61 2e-10
AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171 59 8e-10
AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272 59 1e-09
AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171 57 4e-09
AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196 57 5e-09
AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171 54 3e-08
AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180 53 5e-08
>AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168
Length = 167
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 1 MAKLIFLLAMVAFASTLLVSIAGXXXXXXXXXXXXXXXXXYDMLQRFGFPVGILPQGVQG 60
M++L L+A F S+L ++ Y +LQ + FPVGILP+GV
Sbjct: 1 MSRLPILIASCLFLSSLTAAVV--------TAAESDTPTAYSLLQSYNFPVGILPKGVVA 52
Query: 61 YKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAGSITSLEGVKVKEAFAWFRI 120
Y L F Y C F Y L+Y S ++G I+ + L GVKVK F W I
Sbjct: 53 YDLDTTTGKFHAYFNDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNI 112
Query: 121 SEVDVDGDQIKLHVGLYTATVAADQLAVSPQC 152
EV +GD+++ VG+ +A A + SPQC
Sbjct: 113 VEVIRNGDEMEFSVGITSANFAIQEFLESPQC 144
>AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167
Length = 166
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 60/112 (53%)
Query: 41 YDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAA 100
Y +LQ + FPVGILP+GV Y L F Y C F Y L Y S ++G I+
Sbjct: 33 YTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISE 92
Query: 101 GSITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGLYTATVAADQLAVSPQC 152
IT L GVKVK F W I EV +GD+++ VG+ +A D+ SPQC
Sbjct: 93 NKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQC 144
>AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155
Length = 154
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 41 YDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAA 100
YD ++ + P GILP+GV Y+L +F+VY CEF + Y L Y S ++G I+
Sbjct: 30 YDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEF-TIQSYQLKYKSTISGVISP 88
Query: 101 GSITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGLYTATVAADQLAVSPQC 152
G + +L+GV VK F W I+EV +DG + VG+ +A+ A SPQC
Sbjct: 89 GHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQC 140
>AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182
Length = 181
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 41 YDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAA 100
Y++L ++G P G+LP V + L DDG F V+L CE Y++HY ++G+I
Sbjct: 37 YELLPKYGLPSGLLPDTVTDFTLSDDGR-FVVHLPNSCEIEF--DYLVHYDKTISGRIGY 93
Query: 101 GSITSLEGVKVKEAFAWFRISEVDVD---GDQIKLHVGLYTATVAADQLAVSPQCN 153
GSIT L+G++VK+ F W + E+ VD D I VG + DQ C+
Sbjct: 94 GSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSCH 149
>AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176
Length = 175
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 41 YDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAA 100
+D+L R+GFP G+LP V+ Y + DDG F V L C + + + V Y +AG+++
Sbjct: 55 HDLLPRYGFPKGLLPNNVKSYTISDDG-DFTVDLISSCYVKFSDQLVF-YGKNIAGKLSY 112
Query: 101 GSITSLEGVKVKEAFAWFRIS--EVDVDGDQIKLHVGLYTATVAADQLAVSPQCN 153
GS+ + G++ KEAF W I+ E D + VG + T+ A P C+
Sbjct: 113 GSVKDVRGIQAKEAFLWLPITAMESDPSSATVVFSVGFVSKTLPASMFENVPSCS 167
>AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150
Length = 149
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 41 YDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAA 100
Y +L+ + P GILP+GV Y L F+V C+F + Y + Y ++G I
Sbjct: 26 YQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQF-SIDSYKVKYKPVISGIITR 84
Query: 101 GSITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGLYTATVAADQLAVSPQC 152
G + L GV VK F W ISEV DGD ++ VG + ++ SP+C
Sbjct: 85 GRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAASEEFSSKYFVDSPKC 136
>AT5G19590.1 | chr5:6611614-6612069 REVERSE LENGTH=152
Length = 151
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 44 LQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFR-AAKKYVLHYSSRVAGQIAAGS 102
L GFP+G+LP V+ Y L F ++L G C+ Y+ YS++V G+I+ G
Sbjct: 35 LTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYIATYSNKVTGRISQGK 94
Query: 103 ITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGLYTATVAADQLAVSPQC 152
I L+G++V+ F + I+ + GD + V TA + S C
Sbjct: 95 IAELQGIRVRAFFKSWSITGIRSSGDNLVFEVAGITAKYPSKNFDESLDC 144
>AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162
Length = 161
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 41 YDMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAA 100
+D+L+ G P G+LPQ V Y L +DG EV+LA C A + +H+ + V G ++
Sbjct: 30 HDVLRSEGLPAGLLPQEVDSYILHNDGR-LEVFLAAPC--YAKFETNVHFEAVVRGNLSY 86
Query: 101 GSITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGLYTATVAADQLAVS-----PQC 152
GS+ +EG+ KE F W ++ ++ V+ + V + VA QL++S P+C
Sbjct: 87 GSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIV--FDIGVAFKQLSLSLFEDPPKC 141
>AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170
Length = 169
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 7 LLAMVAFASTLLVSIAGXXXXXXXXXXXXXXXXXYDMLQRFGFPVGILPQGVQGYKLGDD 66
+L +V A LV +AG Y++L G P GI P+GV+ + +
Sbjct: 2 MLRIVQIAFLCLVLVAGISISTAISETETI----YEILLANGLPSGIFPKGVREFTFDVE 57
Query: 67 GSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAGSITSLEGVKVKEAFAWFRISEVDVD 126
F VYL CE A + +HY + + G I + I+ L G+ +E F WF + + VD
Sbjct: 58 TGRFSVYLNQACE--AKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVD 115
>AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171
Length = 170
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 42 DMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAG 101
++L+ FG PVGI PQ Y+ ++ V++ CE VL +S+ V G + G
Sbjct: 56 ELLKEFGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKG 115
Query: 102 SITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGL 136
+ +EG+K K W +++ + D ++ G+
Sbjct: 116 KLAEVEGMKTK-VMIWVKVTCISADSSKVYFTAGI 149
>AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272
Length = 271
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 48 GFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAGSITSLE 107
G P+G+ P+GV+G+ + + F VYL C+ A + LHY V+G I I L
Sbjct: 38 GLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQ--AKYETELHYDEIVSGTIGYAQIRDLS 95
Query: 108 GVKVKEAFAWFRISEVDVD 126
G+ +E F W ++ + VD
Sbjct: 96 GISAQELFLWLQVKGIRVD 114
>AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171
Length = 170
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 42 DMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAG 101
++L+ FG PVGI P+ Y+ + V++ CE VL +++ V G + G
Sbjct: 56 ELLKEFGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKG 115
Query: 102 SITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGL 136
+ +EG+K K W +++ + D ++ G+
Sbjct: 116 KLADVEGMKTK-VMIWVKVTSISADSSKVHFTAGM 149
>AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196
Length = 195
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 5 IFLLAMVAFASTLLVSIAGXXXXXXXXXXXXXXXXXYDMLQRFGFPVGILPQGVQGYKLG 64
+F L +V F+S L ++ YD L+ P GI+P+GV + +
Sbjct: 7 LFFLIIVLFSSILFPQLSSLPDPSF-----------YDYLRESNLPAGIVPKGVTNFSID 55
Query: 65 DDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAGSITSLEGVKVKEAFAWFRISEVD 124
F V L C+ + ++ H+ ++G ++ G I +L GV KE F WF + +
Sbjct: 56 IKTGRFTVALPVPCDAKFENQF--HFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIH 113
Query: 125 VDGDQ---IKLHVGLYTATVAADQLAVS 149
VD I VG VA QL++S
Sbjct: 114 VDPQSSGLIHFDVG-----VADKQLSLS 136
>AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171
Length = 170
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 42 DMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAG 101
++L+ + P+GI P Y+ ++ V + CE VL +++ V G + G
Sbjct: 56 ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115
Query: 102 SITSLEGVKVKEAFAWFRISEVDVDGDQIKLHVGL 136
+T +EG+K K W +++ + D ++ G+
Sbjct: 116 KLTDVEGIKTK-VMIWVKVTSISTDASKVYFTAGM 149
>AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180
Length = 179
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 42 DMLQRFGFPVGILPQGVQGYKLGDDGSSFEVYLAGDCEFRAAKKYVLHYSSRVAGQIAAG 101
D+L+ + P G+ PQ + Y+ + + V+ + CE + Y++RV G + G
Sbjct: 61 DLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRG 120
Query: 102 SITSLEGVKVKEAFAWFRISEVDVDGDQ 129
+ +EG+K K W +++ + V+ +
Sbjct: 121 KLMGVEGMKTK-VLVWVKVTTISVESSK 147
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,502,554
Number of extensions: 84100
Number of successful extensions: 197
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 189
Number of HSP's successfully gapped: 15
Length of query: 153
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 63
Effective length of database: 8,639,129
Effective search space: 544265127
Effective search space used: 544265127
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 107 (45.8 bits)