BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0179000 Os11g0179000|AK062657
(178 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192 147 3e-36
AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188 146 6e-36
AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190 141 2e-34
AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187 135 9e-33
AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186 134 3e-32
AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188 132 7e-32
AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186 131 2e-31
AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194 130 3e-31
AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174 128 2e-30
AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183 124 4e-29
AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126 114 2e-26
AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187 113 5e-26
AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191 109 8e-25
AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272 102 2e-22
AT1G64160.1 | chr1:23814063-23814611 FORWARD LENGTH=183 62 2e-10
AT4G23690.1 | chr4:12339152-12339715 REVERSE LENGTH=188 61 2e-10
AT4G11190.1 | chr4:6826682-6827236 FORWARD LENGTH=185 58 2e-09
AT4G11210.1 | chr4:6832691-6833245 FORWARD LENGTH=185 58 3e-09
AT4G11180.1 | chr4:6820049-6820606 FORWARD LENGTH=186 52 2e-07
AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244 50 7e-07
AT4G13580.1 | chr4:7900427-7901161 FORWARD LENGTH=245 49 2e-06
AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323 47 7e-06
>AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192
Length = 191
Score = 147 bits (371), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 95/145 (65%), Gaps = 2/145 (1%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T ++VYWHD+V G NP++IR+ + +SS+YFG++ ID+ LT VVG+A
Sbjct: 46 THLRVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDNALTLD--VPINSTVVGQA 103
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y A Q+ IGLLM MN F G +NGS++ I+GRN VMS VREM VVGGSG FR AR
Sbjct: 104 QGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFAR 163
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GY EART K+G+ VE ++
Sbjct: 164 GYVEARTKLFDMKTGDATVESNCYI 188
>AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188
Length = 187
Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T KVYWHD+++GPNPT+I + Q TN S+YFGA+ ID+ LT+ V+G+A
Sbjct: 45 THFKVYWHDILSGPNPTSIMI-QPPVTN--SSYFGAISMIDNALTAK--VPMNSTVLGQA 99
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y A Q+ +G LM MNF F G +NGS++ I+GRN +S VREM +VGGSG FR AR
Sbjct: 100 QGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFAR 159
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GY EART K+G+ VEY+ +V
Sbjct: 160 GYVEARTKWINLKNGDATVEYSCYV 184
>AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190
Length = 189
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T + Y+HD+V+G PT+++VA +TN+S+T FG V +DD LT P E VGRA
Sbjct: 45 THLHFYFHDIVSGDKPTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITS--EEVGRA 102
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y ADQ +GLLM N VFT G + S++A+ GRN V+S VREM ++GG+G FR R
Sbjct: 103 QGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGR 162
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GYA A+T+ SG+ +VEY +++
Sbjct: 163 GYALAKTLVFNITSGDAVVEYNVYI 187
>AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187
Length = 186
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 95/145 (65%), Gaps = 5/145 (3%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T +VYWHD+++G NP+++ + S +S++FG+V ID+ LT+ +VG+A
Sbjct: 44 THFRVYWHDILSGSNPSSVVINPPIS---NSSFFGSVTVIDNRLTTE--VAVNSTLVGQA 98
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y QR LM MNF F G +NGSS+AI+GRN V++ VREM V+GGSG FR AR
Sbjct: 99 QGIYAATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFAR 158
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GY EART+ KSG+ VEY+ +V
Sbjct: 159 GYVEARTMWFDQKSGDATVEYSCYV 183
>AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186
Length = 185
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T + Y+HDV++G PTA++VA+A TN+S+ FG ++ DDPLT P + VGRA
Sbjct: 43 THLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPS--SKEVGRA 100
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y + I M N FTAG+ NGS++A+ GRNE+ S VREM ++GG+G FR AR
Sbjct: 101 QGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFAR 160
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GYA+A+T + +VEY +F+
Sbjct: 161 GYAQAKTYK--VVGLDAVVEYNVFI 183
>AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188
Length = 187
Score = 132 bits (333), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T ++ Y+HD ++G NPTA++VAQ T S T FGAV +DD LT + ++VGRA
Sbjct: 43 TNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALTET--ADPKSKLVGRA 100
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y + + +GL+M M+F F G + S+++++G+N M+P+REM +VGG+G FRMAR
Sbjct: 101 QGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMFRMAR 160
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GYA ART K+G+ IV Y + +
Sbjct: 161 GYAIARTNWFDPKTGDAIVGYNVTI 185
>AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186
Length = 185
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T +VYWHD+V G + +++ + +T FG + ID+PLT +P ++VGRA
Sbjct: 40 THFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTPKLSS--KMVGRA 97
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y + IGLLM MNF G +NGS++ ++GRN V VREM V+GGSG FR AR
Sbjct: 98 QGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFAR 157
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GY +A T + K+G IVEY ++
Sbjct: 158 GYVQASTHEFNLKTGNAIVEYNCYL 182
>AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194
Length = 193
Score = 130 bits (328), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T + Y+HD+++G PT IRVA+A TN+S+T FGAV+ +D P+T P + VGRA
Sbjct: 51 THLHFYFHDIISGDKPTTIRVAEAPGTNSSATVFGAVLIVDAPVTEGPELS--SKEVGRA 108
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y D + G M NFVFT G+ NGS+ A+ GRN ++ RE+ ++GG+G FR AR
Sbjct: 109 QGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFAR 168
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GYA +T + + +VEY +F+
Sbjct: 169 GYALPKTYKV--VNIDAVVEYNVFI 191
>AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174
Length = 173
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 86/135 (63%), Gaps = 5/135 (3%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T ++VYWH+ V G NP+++ + Q +S+ G++ +DDPLT VVG+A
Sbjct: 43 THLRVYWHNSVNGRNPSSVMIQQPV---LNSSLSGSITMMDDPLTFD--VPRNATVVGQA 97
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y A Q IG LM MNF FT G +NGS++ I+GRN VMS VREM VVGGSG FR AR
Sbjct: 98 QGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSGIFRFAR 157
Query: 152 GYAEARTVDSGFKSG 166
GY EART K+G
Sbjct: 158 GYVEARTKSFDLKAG 172
>AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183
Length = 182
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRA 91
T + Y+HDV++G PTA++VA+A T + FG ++ DDPLT P + VGRA
Sbjct: 40 THLHFYFHDVISGDKPTAVKVAEARPTTTLNVKFGVIMIADDPLTEGPDPS--SKEVGRA 97
Query: 92 QGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMAR 151
QG Y + I M N+VFTAG+ NGS++A+ GRN++ S VRE+ ++GG+G FR AR
Sbjct: 98 QGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELPIIGGTGAFRFAR 157
Query: 152 GYAEARTVDSGFKSGETIVEYTLFV 176
GYA +T + +VEY +F+
Sbjct: 158 GYALPKTYK--IVGLDAVVEYNVFI 180
>AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126
Length = 125
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
Query: 54 QAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVF 113
Q A +N SST FG++ D+ LTS VVG++QG Y A QR +G LM MNF F
Sbjct: 3 QKAVSN-SSTSFGSITMTDNALTSD--VPVNSTVVGQSQGFYAGAAQRELGFLMAMNFAF 59
Query: 114 TAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMARGYAEARTVDSGFKSGETIVEYT 173
G +NGS++ I+GRN V S VREM+VVGGSG FR+ARGY EART K+G+ VEY
Sbjct: 60 KTGKYNGSTITILGRNTVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYN 119
Query: 174 LFV 176
+V
Sbjct: 120 CYV 122
>AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187
Length = 186
Score = 113 bits (282), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAAST----NASSTYFGAVVAIDDPLTSSPXXXXXGEV 87
T + ++HD + PNP+AI +A+ T ++S + FG++ A+DDPLT P E
Sbjct: 37 TNLHFFFHDTLTAPNPSAILIAKPTHTRGDNDSSPSPFGSLFALDDPLTVGPDPKS--EK 94
Query: 88 VGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKF 147
+G A+G Y + + V L M ++F FT+G NGSS+A+ RN + RE++VVGG G+F
Sbjct: 95 IGNARGMYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREVAVVGGRGRF 154
Query: 148 RMARGYAEARTVDSGFKSGETIVEYTL 174
RMARG A+ T +G+ IVEY +
Sbjct: 155 RMARGVAQLNTYYVNLTNGDAIVEYNV 181
>AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191
Length = 190
Score = 109 bits (272), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 32 TKIKVYWHDVVAGPNPTAIRVAQAAST--NASSTYFGAVVAIDDPLTSSPXXXXXGEVVG 89
T+++ Y HD ++G NPTA+R+A A T +AS FG++ IDDPLT P + +G
Sbjct: 39 TRVRFYLHDTLSGQNPTAVRIAHANLTGGSASPVGFGSLFVIDDPLTVGPEKHS--KEIG 96
Query: 90 RAQGTYT--FADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPV--REMSVVGGSG 145
QG Y D ++M + FTAG NGSS++I RN V V RE+++VGG G
Sbjct: 97 NGQGMYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGGRG 156
Query: 146 KFRMARGYAEARTVDSGFKSGETIVEY 172
KFRMARG+ + +T K+G+ ++ Y
Sbjct: 157 KFRMARGFVKVKTNKIDMKTGDAVLRY 183
>AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272
Length = 271
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 68 VVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMG 127
+ +DD LT P E VGRAQG + ADQ GLLM NFVFT G+ +GS++++ G
Sbjct: 163 IPLVDDILTVGPEITS--EEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYG 220
Query: 128 RNEVMSPVREMSVVGGSGKFRMARGYAEARTVDSGFKSGETIVEYTLFV 176
RN + S VREM ++GG+G FR RGYA+A+T SG +V+Y +++
Sbjct: 221 RNPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYI 269
>AT1G64160.1 | chr1:23814063-23814611 FORWARD LENGTH=183
Length = 182
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 36 VYWHDVVAGPNPTAIRVAQAASTNAS---STYFGAVVAIDDPLTSSPXXXXXGEVVGRAQ 92
+Y+HD++ G + AA TN + FG +V DDP+T E V RAQ
Sbjct: 40 LYYHDIMFGVDDVQ-NATSAAVTNPPGLGNFKFGKLVIFDDPMTID--KNFQSEPVARAQ 96
Query: 93 GTYTFADQRVIGLLMDMNFVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFRMARG 152
G Y + + VF + H G+ L IMG + +M R++SVVGG+G F M+RG
Sbjct: 97 GFYFYDMKNDYNAWFAYTLVFNSTQHKGT-LNIMGADLMMVQSRDLSVVGGTGDFFMSRG 155
>AT4G23690.1 | chr4:12339152-12339715 REVERSE LENGTH=188
Length = 187
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 37 YWHDVVA-GPN-PTAIRVAQAASTNASSTYFGAVVAIDDPLTSSPXXXXXGEVVGRAQGT 94
Y+HD++ G N A A + + FG V D P+T + V RAQG
Sbjct: 46 YFHDILYDGDNVANATSAAIVSPPGLGNFKFGKFVIFDGPITMDKNYL--SKPVARAQGF 103
Query: 95 YTFADQRVIGLLMDMN------FVFTAGDHNGSSLAIMGRNEVMSPVREMSVVGGSGKFR 148
Y F D + MD N VF + +H G+ L IMG + +M P R++SVVGG+G F
Sbjct: 104 Y-FYDMK-----MDFNSWFSYTLVFNSTEHKGT-LNIMGADLMMEPTRDLSVVGGTGDFF 156
Query: 149 MARGYA 154
MARG A
Sbjct: 157 MARGIA 162
>AT4G11190.1 | chr4:6826682-6827236 FORWARD LENGTH=185
Length = 184
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 65 FGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLA 124
FG V +D+P+T E V R QG + + + + + VF + H G+ L
Sbjct: 72 FGKFVIMDNPVTMD--QNMLSEQVARVQGFFFYHGKTKYDTWLSWSVVFNSTQHKGA-LN 128
Query: 125 IMGRNEVMSPVREMSVVGGSGKFRMARGYAEART 158
IMG N M P R++ VVGG+G F M RG A T
Sbjct: 129 IMGENAFMEPTRDLPVVGGTGDFVMTRGIATFMT 162
>AT4G11210.1 | chr4:6832691-6833245 FORWARD LENGTH=185
Length = 184
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 65 FGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLA 124
FG V +DDP+T + V R QG + + + + VF + H G+
Sbjct: 72 FGKFVIMDDPVTMD--QNYLSKPVARVQGFFCYHGKATYDAWIAWTVVFNSTQHKGA-FT 128
Query: 125 IMGRNEVMSPVREMSVVGGSGKFRMARGYAEART 158
IMG N M P R++ +VGG+G F M RG A T
Sbjct: 129 IMGENPFMEPTRDLPIVGGTGDFIMTRGIATLTT 162
>AT4G11180.1 | chr4:6820049-6820606 FORWARD LENGTH=186
Length = 185
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 65 FGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLA 124
FG ++ I++P+T + V RAQG Y + + + VF + H G+
Sbjct: 73 FGELIIINNPVTLD--QNYLSKPVARAQGFYFYNMKTNYNAWVAWTLVFNSTKHKGT-FT 129
Query: 125 IMGRNEV-MSPVREMSVVGGSGKFRMARGYAEART 158
IM N + P R++S+VGG+G F M RG A +T
Sbjct: 130 IMDANPFGLQPARDLSIVGGTGDFLMTRGIATFKT 164
>AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244
Length = 243
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 65 FGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLA 124
FG + IDD LTS P + +G+AQG Y + +M + G++N +L
Sbjct: 129 FGTITVIDDILTSGPDLGS--QPLGKAQGVYVASSADGSTQMMAFTAMLEGGEYN-DNLN 185
Query: 125 IMGRNEVMSPVREMSVVGGSGKFRMARGYAEARTV 159
G + S + +SV GG+G+F+ A G+AE R +
Sbjct: 186 FYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPL 220
>AT4G13580.1 | chr4:7900427-7901161 FORWARD LENGTH=245
Length = 244
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 65 FGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNGSSLA 124
FG + IDD +TS P + +G+AQG Y + +M + G++N +L
Sbjct: 130 FGTITVIDDIITSGPDLGS--QPLGKAQGVYVASSADGSTQMMAFTAMLEGGEYN-DNLN 186
Query: 125 IMGRNEVMSPVREMSVVGGSGKFRMARGYAEARTV 159
G + S + +SV GG+G+F+ A G+AE R +
Sbjct: 187 FYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPL 221
>AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323
Length = 322
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 65 FGAVVAIDDPLTSSPXXXXXGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHN----- 119
FG + +DD LT S V+GRAQG Y + + + V G+H+
Sbjct: 200 FGTITVVDDELTES--HELGSAVIGRAQGFYLASSLDGTSQTLSLT-VLLHGEHDQHDTL 256
Query: 120 GSSLAIMGRNEVMSPVREMSVVGGSGKFRMARGYAEARTV 159
+++ G + S +++V+GG+GKF A+GYA T+
Sbjct: 257 DDAISFFGVHRTASHASQIAVIGGTGKFEHAKGYAIVETL 296
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,782,503
Number of extensions: 95303
Number of successful extensions: 231
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 209
Number of HSP's successfully gapped: 22
Length of query: 178
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 86
Effective length of database: 8,584,297
Effective search space: 738249542
Effective search space used: 738249542
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)