BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0170000 Os11g0170000|AK106809
(637 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64440.1 | chr5:25766229-25770260 FORWARD LENGTH=608 481 e-136
AT3G25660.1 | chr3:9339640-9342044 REVERSE LENGTH=538 149 4e-36
AT5G09420.1 | chr5:2928316-2931750 FORWARD LENGTH=604 82 1e-15
AT1G08980.1 | chr1:2884455-2886430 FORWARD LENGTH=426 74 2e-13
AT5G07360.1 | chr5:2326925-2330011 REVERSE LENGTH=660 65 1e-10
AT3G17970.1 | chr3:6148030-6151794 FORWARD LENGTH=590 64 3e-10
>AT5G64440.1 | chr5:25766229-25770260 FORWARD LENGTH=608
Length = 607
Score = 481 bits (1238), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/609 (42%), Positives = 370/609 (60%), Gaps = 15/609 (2%)
Query: 36 KVYKPASEVNLGADSNEFYISPNVKAPRVAGLLVKIFAWVLEAPIIGSIVLYILKRDNLV 95
+V K ASEV+L S Y + +KAP + GL K+F +LEAP+IGS+++ LK+DN +
Sbjct: 5 QVMKRASEVDL---STVKYKAETMKAPHLTGLSFKLFVNLLEAPLIGSLIVDYLKKDNGM 61
Query: 96 NKLVSDAEIPEPPLFTAAHTWQDIPEQNVSLTKPDMSPAERVQEAVVCLPAR--LESVLA 153
K+ + IPE P+F Q+ PE +V + D SP +R++ A+ CLP S+ A
Sbjct: 62 TKIFRNTVIPEEPMFRPEFPSQE-PEHDVVIVGEDESPIDRLETALKCLPQYDPSRSLHA 120
Query: 154 DPPSPGFRRWTIRDFTSAYISGEITPVMVARRFLAAVKECSGPDLNMALFISCNPQDVIR 213
DP S FR W IRD+ AY S TP+ VA+R ++ ++E I + +VI+
Sbjct: 121 DPVS-SFRYWKIRDYAYAYRSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIK 179
Query: 214 QAEASTLRYQQGAPLSAMDGVLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLR 273
QAEAST R++QG P+S +DG+ V +KD+IDCLP+PT GGT WL R +D+AVV++LR
Sbjct: 180 QAEASTRRFEQGNPISVLDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLR 239
Query: 274 ACGAVLAGKTNMHELGAGTSGINPHHGSTRNPYNTXXXXXXXXXXXXXXXXXXLCPVALG 333
+CGA+L GK NMHELG GT+G N ++G+TRNP++ LC ALG
Sbjct: 240 SCGAILLGKANMHELGMGTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALG 299
Query: 334 ADGGGSVRMPAALCGVVGLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAAIAD 393
DGGGSVR+P+ALCG+ GLK T GR G L TV + G LA+++EDA + YAAI
Sbjct: 300 TDGGGSVRIPSALCGITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILG 359
Query: 394 QSQPSHLQPELNLPLL------KAASSMPTIRLARYAKWFNDC-SEDIRSCCYKAVHTLR 446
S + + P ++++ ++RL +Y KWFND S DI C + L
Sbjct: 360 SSSADRYNLKPSPPCFPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLS 419
Query: 447 TRYGWETADVTIPEIEEMRLAHYVTMGSECTASFDKYLKKLSKSEIGWDVRIALSAYGSF 506
+G + ++ +PE+EEMR AH +++GS +S Y + S++ +D R + + + SF
Sbjct: 420 NNHGCKVVEIVVPELEEMRAAHVISIGSPTLSSLTPYCEAGKNSKLSYDTRTSFAIFRSF 479
Query: 507 SSRAYLNSQRIRNRQMYFHDKIFETFDVIVTPMTGVTAHELQDNAGHTGELDYINGAALV 566
S+ Y+ +Q +R R M +H IF+ DVIVTP TG+TA + +A GE + L+
Sbjct: 480 SASDYIAAQCLRRRLMEYHLNIFKDVDVIVTPTTGMTAPVIPPDALKNGETNIQVTTDLM 539
Query: 567 RYSIAGNFLGLPAITVKVGYDREGLPVGLQFIGRPWSEATLLHLAYAMQEACGKNYRKPM 626
R+ +A N LG PAI+V VGYD+EGLP+GLQ +GRPW+EAT+L LA A++E +KP
Sbjct: 540 RFVLAANLLGFPAISVPVGYDKEGLPIGLQIMGRPWAEATVLGLAAAVEELAPVT-KKPA 598
Query: 627 VYYDLLNKN 635
++YD+LN N
Sbjct: 599 IFYDILNTN 607
>AT3G25660.1 | chr3:9339640-9342044 REVERSE LENGTH=538
Length = 537
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 219/498 (43%), Gaps = 57/498 (11%)
Query: 171 AYISGEITPVMVARRFLAAVKECSGPDLNMALFISCNPQDVIRQAEASTLRYQQGAPLSA 230
+ +SGE T V +A+ +L+ ++ + P L L +S ++V++ A+ R +G L
Sbjct: 52 SLLSGETTAVEIAKSYLSRIR-LTEPQLKCFLHVS---ENVLKDAQEIDQRIAKGEELGP 107
Query: 231 MDGVLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGA 290
+ GVL+ VKD I P+T +R L+ RP DA V +++ G ++ GKTNM E G
Sbjct: 108 LAGVLIGVKDNICTQGMPSTAASRILEHYRPPF-DATAVKKIKELGGIVVGKTNMDEFGM 166
Query: 291 GTSGINPHHGSTRNPYNTXXXXXXXXXXXXXXXXXXLCPVALGADGGGSVRMPAALCGVV 350
G++ T NP++ C V+LG+D GGSVR PA+ CGVV
Sbjct: 167 GSTTEASAFQVTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASFCGVV 226
Query: 351 GLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAAIA-----DQSQPSHLQPELN 405
GLKPT GR S+ GL+ ++ + G +TV DA + AI+ D + PE
Sbjct: 227 GLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFDSTSSKQDVPEFQ 286
Query: 406 LPLLKA----ASSMPTIRLARYAKWFND-CSEDIRSCCYKAVHTLRTRYGWETADVTIPE 460
L + + +++ + D +RS +A L G +V++P
Sbjct: 287 SQFLSVDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEA-LGCILTEVSLPS 345
Query: 461 IEEMRLAHYVTM----------------GSECTASFDKYLKKLSKSE-IGWDV--RIALS 501
A+YV G++ A L + S+ E G +V RI +
Sbjct: 346 FSLGLPAYYVIASSESSSNLSRYDGVRYGNQVMAEELNKLYECSRGEGFGGEVKMRILMG 405
Query: 502 AY---GSFSSRAYLNSQRIRNRQMYFHDKIFETFDVIVTPMTGVTAHELQDN-----AGH 553
Y + Y +Q++R E D++++P A+++ + A +
Sbjct: 406 TYALSAGYYDAYYKRAQQVRTLIRKDFKAALEQNDILISPAAPSAAYKIGEKKDDPLAMY 465
Query: 554 TGELDYINGAALVRYSIAGNFLGLPAITVKVGYDR---EGLPVGLQFIGRPWSEATLLHL 610
G++ +N N GLPA+ + G GLPVGLQ IG + E LL +
Sbjct: 466 AGDIMTVN----------VNLAGLPAMVLPCGLVEGGPSGLPVGLQMIGAAFDEEKLLKV 515
Query: 611 AYAMQEAC-GKNYRKPMV 627
+ ++ G ++ P++
Sbjct: 516 GHIFEQTLKGSSFVPPLL 533
>AT5G09420.1 | chr5:2928316-2931750 FORWARD LENGTH=604
Length = 603
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 226 APLSAMDGVLVAVKDEIDCLPYPTTGGT-RWLQRMRPCVQDAAVVAQLRACGAVLAGKTN 284
A ++ G+ ++ D D Y T G +W + + A VV L GA GKT
Sbjct: 66 AAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGATCVGKTI 125
Query: 285 MHELGAGTSGINPHHGSTRNPYNTXXXXXXXXXXXXXXXXXXLCPVALGADGGGSVRMPA 344
M ELG G G N H+G+ NP L +LG D G VR+PA
Sbjct: 126 MDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTTGGVRVPA 185
Query: 345 ALCGVVGLKPTAGRFSKDGLLP-------LNWTVGMPGILAATVEDALIAYAAIADQSQP 397
A CG++G +P+ G S G+LP + W P +L V AL+ +A+ + Q
Sbjct: 186 AFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDPSVL-CQVGHALLNLSAVTHRRQR 244
Query: 398 S 398
S
Sbjct: 245 S 245
>AT1G08980.1 | chr1:2884455-2886430 FORWARD LENGTH=426
Length = 425
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 231 MDGVLVAVKDEIDCLPYPTT-GGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELG 289
+ G+ A+KD D T G WL+ A VV+ L GA G T M E+
Sbjct: 28 LQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATSTAPVVSSLLEAGATALGITIMDEMA 87
Query: 290 AGTSGINPHHGSTRNPYNTXXXXXXXXXXXXXXXXXXLCPVALGADGGGSVRMPAALCGV 349
+G N H+G+ RNP L ++G D GGSVR+PA+ CG+
Sbjct: 88 YSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVAARLVDFSIGTDTGGSVRVPASYCGI 147
Query: 350 VGLKPTAGRFSKDGLLPL 367
G +P+ G S GL P+
Sbjct: 148 FGFRPSHGAVSTVGLTPM 165
>AT5G07360.1 | chr5:2326925-2330011 REVERSE LENGTH=660
Length = 659
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 213 RQAEASTLRYQQGAPLSAMDGVLVAVKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQL 272
+QA+ + QG L + G+ +KD + Y TT G+ + ++ A V +L
Sbjct: 250 KQAKEADDLLSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIE-AWVYKRL 308
Query: 273 RACGAVLAGKTNMHELGAGTSGINP--HHGSTRNPYNTXXXXXXXXXXXXXXXXXXLCPV 330
+A GAVL K L G+ + G TRNP+N + P
Sbjct: 309 KASGAVLVAK-----LVTGSMAYDDIWFGGRTRNPWNIEEFSTGSSAGPAASTSAGMVPF 363
Query: 331 ALGADGGGSVRMPAALCGVVGLKPTAGRFSKDGLLPLNWTVGMPGILAATVEDALIAYAA 390
A+G++ GS+ PAA CG+ L+PT G + G++ ++ ++ G T D + A
Sbjct: 364 AIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDA 423
Query: 391 I 391
I
Sbjct: 424 I 424
>AT3G17970.1 | chr3:6148030-6151794 FORWARD LENGTH=590
Length = 589
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 233 GVLVAVKDEIDCLPYPTT-GGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAG 291
G+ AV D D Y T G W++ + VV+ L GA GKT + E
Sbjct: 60 GLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFS 119
Query: 292 TSGINPHHGSTRNPYNTXXXXXXXXXXXXXXXXXXLCPVALGADGGGSVRMPAALCGVVG 351
SG N H+ S NP ALG D G VR+PA CGV+G
Sbjct: 120 ISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLG 179
Query: 352 LKPTAGRFSKDGLLPLNWTVGMPGILA 378
K + G S G++P++ ++ G A
Sbjct: 180 FKSSYGAISNTGIIPVSSSLDSVGWFA 206
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,636,788
Number of extensions: 563531
Number of successful extensions: 1113
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1099
Number of HSP's successfully gapped: 6
Length of query: 637
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 532
Effective length of database: 8,227,889
Effective search space: 4377236948
Effective search space used: 4377236948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)