BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0163600 Os11g0163600|AK070139
(317 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456 341 2e-94
AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446 332 2e-91
AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430 320 6e-88
AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408 293 7e-80
AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395 273 1e-73
AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390 266 1e-71
AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414 263 9e-71
AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381 259 1e-69
AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380 130 9e-31
AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399 54 1e-07
>AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456
Length = 455
Score = 341 bits (875), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 213/329 (64%), Gaps = 13/329 (3%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
MQCFI+RDKS TY+LYL L A+LV+NGKFLLSAKR T TEYVISM+A+ +SRS+N
Sbjct: 128 MQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSN 187
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYN---ATSDSQSGKTSRRFSNKGTAKHPCSTYSIANI 117
T IGK+RSNFLGTKF+IYDT YN A + G + R +S + + K P +Y IA +
Sbjct: 188 TYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPKVPSGSYKIAQV 247
Query: 118 SYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXX 177
SYELNV GTRGPRRM C M+SIPASSL GGTVP QPD I+
Sbjct: 248 SYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRK 307
Query: 178 XXXXM--HFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLN 235
FSSA+FSDI +G VL + +E PL+L+NK PRWHEQLQCWCLN
Sbjct: 308 ITYDYSNDFSSARFSDI-LGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQCWCLN 366
Query: 236 FRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEH-------DKVILQFGKVAKDM 288
FRGRVTVASVKNFQLI + DK+ILQFGKV KDM
Sbjct: 367 FRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDM 426
Query: 289 FTMDYHYPLSAFQAFAISLSSFDTKLACE 317
FTMD+ YPLSAFQAFAI LSSFDTKLACE
Sbjct: 427 FTMDFRYPLSAFQAFAICLSSFDTKLACE 455
>AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446
Length = 445
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/324 (55%), Positives = 221/324 (68%), Gaps = 15/324 (4%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+RDKS T++L+L L A+LV+NGKFLLSAKR T TEY+ISM+A+N+SRS+N
Sbjct: 130 IQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSN 189
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQ-SGKTSR-RF-SNKGTAKHPCSTYSIANI 117
+ +GKLRSNFLGTKF++YDT P N +S + + +TSR RF S + + K P +Y+IA I
Sbjct: 190 SYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVPSGSYNIAQI 249
Query: 118 SYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSIL--AHXXXXXXXXXXXXXXX 175
+YELNV GTRGPRRM C+M+SIP SSLE GG+VP+QP+ ++ +
Sbjct: 250 TYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKS 309
Query: 176 XXXXXXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLN 235
+ FSS++FS++ I ++EE PLIL+NK PRWHEQLQCWCLN
Sbjct: 310 SFDHRSLDFSSSRFSEMGIS--------CDDNEEEASFRPLILKNKQPRWHEQLQCWCLN 361
Query: 236 FRGRVTVASVKNFQLIXXXXXXXXXX--XXXXXXXXXXXEHDKVILQFGKVAKDMFTMDY 293
FRGRVTVASVKNFQL+ E DKVILQFGKV KDMFTMDY
Sbjct: 362 FRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDY 421
Query: 294 HYPLSAFQAFAISLSSFDTKLACE 317
YPLSAFQAFAI LSSFDTKLACE
Sbjct: 422 RYPLSAFQAFAICLSSFDTKLACE 445
>AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430
Length = 429
Score = 320 bits (820), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/330 (51%), Positives = 210/330 (63%), Gaps = 39/330 (11%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QC+I+RDKS TY+LYLSL A+LV++GKFLLSAKR+ AT TEYVISM+A+N+SRS++
Sbjct: 126 IQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSS 185
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
T IGKL+SNFLGTKF++YDT YN++ SR F S K + K P +Y+IA ++Y
Sbjct: 186 TYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKVPSGSYNIAQVTY 245
Query: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXX 179
ELN+ GTRGPRRM C+MHSIP+ +LE GGTVPSQP+ +
Sbjct: 246 ELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPEFLQ--------------------- 284
Query: 180 XXMHFSSAQFSDISIGDGPRI---GGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNF 236
S S SIG + G +EE K PL+L+ K PRW + L+CWCLNF
Sbjct: 285 -----RSLDESFRSIGSSKIVNHSGDFTRPKEEEGKVRPLVLKTKPPRWLQPLRCWCLNF 339
Query: 237 RGRVTVASVKNFQLIXXXXX---------XXXXXXXXXXXXXXXXEHDKVILQFGKVAKD 287
+GRVTVASVKNFQL+ HDK+IL FGKV KD
Sbjct: 340 KGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILHFGKVGKD 399
Query: 288 MFTMDYHYPLSAFQAFAISLSSFDTKLACE 317
MFTMDY YPLSAFQAFAISLS+FDTKLACE
Sbjct: 400 MFTMDYRYPLSAFQAFAISLSTFDTKLACE 429
>AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408
Length = 407
Score = 293 bits (751), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/319 (50%), Positives = 197/319 (61%), Gaps = 36/319 (11%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLV-DNGKFLLSAKRNWHATCTEYVISMNANNLSRST 59
+QC+I R++S QTYYLYL L A D+GKFLL+AKR TCT+Y+IS+N +++SR +
Sbjct: 123 VQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGS 182
Query: 60 NTNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKH-PCSTYSIANIS 118
NT IGKLRSNFLGTKF +YD P N + ++SR S K + P Y +A+IS
Sbjct: 183 NTYIGKLRSNFLGTKFTVYDAQ-PTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAHIS 241
Query: 119 YELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXX 178
YELNV G+RGPRRM C+M +IPAS++E GGT P+Q + L H
Sbjct: 242 YELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTE--LVH------------SNLDSF 287
Query: 179 XXXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRG 238
F S S+ GP + KE L+L+NKAPRWHEQLQCWCLNF G
Sbjct: 288 PSFSFFRSKSIRAESLPSGPSSAAQ--------KEGLLVLKNKAPRWHEQLQCWCLNFNG 339
Query: 239 RVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLS 298
RVTVASVKNFQL+ EH+ VILQFGKV KD+FTMDY YP+S
Sbjct: 340 RVTVASVKNFQLV-----------AAPENGPAGPEHENVILQFGKVGKDVFTMDYQYPIS 388
Query: 299 AFQAFAISLSSFDTKLACE 317
AFQAF I LSSFDTK+ACE
Sbjct: 389 AFQAFTICLSSFDTKIACE 407
>AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395
Length = 394
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 191/324 (58%), Gaps = 56/324 (17%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+R+++T TY LY L + +N K LL+A+R ATCT+++IS++A N SRS++
Sbjct: 119 IQCFIKRNRATATYILYYGLMPSE-TENDKLLLAARRIRRATCTDFIISLSAKNFSRSSS 177
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
T +GKLRS FLGTKF IYD T A+S +Q+ R + K P ++ ++ NI+YE
Sbjct: 178 TYVGKLRSGFLGTKFTIYDNQT---ASSTAQAQPNRRLHPKQAAPKLPTNSSTVGNITYE 234
Query: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXXX 180
LNV TRGPRRM C M SIP SS+ A +V
Sbjct: 235 LNVLRTRGPRRMHCAMDSIPLSSVIAEPSV------------------------------ 264
Query: 181 XMHFSSAQFSDISIGDGPRIGGRVLSDDEEC-------KETPLILQNKAPRWHEQLQCWC 233
Q + + P G ++ D+E ++ PL+L+NK+PRWHEQLQCWC
Sbjct: 265 ------VQGIEEEVSSSPSPKGETITTDKEIPDNSPSLRDQPLVLKNKSPRWHEQLQCWC 318
Query: 234 LNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDY 293
LNF+GRVTVASVKNFQL+ EH++VILQFGK+ KD+FTMDY
Sbjct: 319 LNFKGRVTVASVKNFQLV---------AEIDASLDAPPEEHERVILQFGKIGKDIFTMDY 369
Query: 294 HYPLSAFQAFAISLSSFDTKLACE 317
YPLSAFQAFAI +SSFDTK ACE
Sbjct: 370 RYPLSAFQAFAICISSFDTKPACE 393
>AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390
Length = 389
Score = 266 bits (679), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 194/317 (61%), Gaps = 38/317 (11%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+R++ TQ+Y+LYL L ++ L D+GKFLL+A + H TCT+Y+IS+ ++++SR +
Sbjct: 111 VQCFIKRNRITQSYHLYLGLTNS-LTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQ 169
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
+GK+RSNFLGTKF ++D + +T ++ K+ K +AK P +Y +A+I+YE
Sbjct: 170 AYVGKVRSNFLGTKFTVFDGNL-LPSTGAAKLRKSRSYNPAKVSAKVPLGSYPVAHITYE 228
Query: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXXX 180
LNV G+RGPR+M CLM +IP S++E G V S+P
Sbjct: 229 LNVLGSRGPRKMQCLMDTIPTSTMEPQG-VASEPSEF------------------PLLGT 269
Query: 181 XMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRV 240
S +Q + S KETPL+L NK PRWHEQL+CWCLNF GRV
Sbjct: 270 RSTLSRSQSKPLR------------SSSSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRV 317
Query: 241 TVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLSAF 300
TVASVKNFQL+ + +++ILQFGKV KDMFTMDY YP+SAF
Sbjct: 318 TVASVKNFQLV-----AAGASCGSGTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAF 372
Query: 301 QAFAISLSSFDTKLACE 317
QAFAI LSSF+T++ACE
Sbjct: 373 QAFAICLSSFETRIACE 389
>AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414
Length = 413
Score = 263 bits (672), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 147/317 (46%), Positives = 182/317 (57%), Gaps = 43/317 (13%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+R+++T Y LYL L A+ D K LLSAKR AT E+V+S++ N+ SRS++
Sbjct: 140 IQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSS 199
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKHPCSTYSIANISYE 120
IGKLRSNFLGTKF +Y+ P S + S S+Y+IA+I YE
Sbjct: 200 NYIGKLRSNFLGTKFTVYENQPPPFNRKLPPSMQVS------PWVSSSSSSYNIASILYE 253
Query: 121 LNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXXXXXXX 180
LNV TRGPRRM C+MHSIP S+++ GG + S +
Sbjct: 254 LNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTE--------------FTNQGKKKKKP 299
Query: 181 XMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRV 240
M F S +GG E + PLIL+NK+PRWHEQLQCWCLNF+GRV
Sbjct: 300 LMDFCSGN-----------LGG------ESVIKEPLILKNKSPRWHEQLQCWCLNFKGRV 342
Query: 241 TVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHYPLSAF 300
TVASVKNFQL+ E D+VILQFGK+ KD+FTMDY YP+SAF
Sbjct: 343 TVASVKNFQLV------AAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISAF 396
Query: 301 QAFAISLSSFDTKLACE 317
QAFAI LSSFDTK CE
Sbjct: 397 QAFAICLSSFDTKPVCE 413
>AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381
Length = 380
Score = 259 bits (661), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 195/322 (60%), Gaps = 51/322 (15%)
Query: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
+QCFI+R+++TQ+Y+LYL L ++ L DNGKFLL+A + ATCT+Y+IS+ ++++S+ +N
Sbjct: 105 VQCFIKRNRNTQSYHLYLGLTTS-LTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSN 163
Query: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKT---SRRFSN--KGTAKHPCSTYSIA 115
+G++RSNFLGTKF ++D SQ+G R SN K + + P +Y IA
Sbjct: 164 AYLGRMRSNFLGTKFTVFD---------GSQTGAAKMQKSRSSNFIKVSPRVPQGSYPIA 214
Query: 116 NISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHXXXXXXXXXXXXXXX 175
+ISYELNV G+RGPRRM C+M +IP S +E+ G V S
Sbjct: 215 HISYELNVLGSRGPRRMRCIMDTIPMSIVESRGVVAST---------SISSFSSRSSPVF 265
Query: 176 XXXXXXMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLN 235
+ +SA SD G +G + PL+L NKAPRWHEQL+CWCLN
Sbjct: 266 RSHSKPLRSNSASCSD----SGNNLG-----------DPPLVLSNKAPRWHEQLRCWCLN 310
Query: 236 FRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDKVILQFGKVAKDMFTMDYHY 295
F GRVTVASVKNFQL+ +++ILQFGKV KDMFTMDY Y
Sbjct: 311 FHGRVTVASVKNFQLVAVSDCEAGQTS------------ERIILQFGKVGKDMFTMDYGY 358
Query: 296 PLSAFQAFAISLSSFDTKLACE 317
P+SAFQAFAI LSSF+T++ACE
Sbjct: 359 PISAFQAFAICLSSFETRIACE 380
>AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380
Length = 379
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 69/101 (68%), Gaps = 9/101 (8%)
Query: 217 ILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEHDK 276
IL+NKAPRWHE LQCWCLNF GRVTVASVKNFQL+ + +
Sbjct: 288 ILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV---------ATVDQSQPSGKGDEET 338
Query: 277 VILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE 317
V+LQFGKV D FTMDY PLSAFQAFAI L+SF TKLACE
Sbjct: 339 VLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 379
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Query: 2 QCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNT 61
QC I+R+K T T+YLYL+L + D GKFLL+A+R TEY+IS++A++ S+ +N
Sbjct: 116 QCLIKRNKKTSTFYLYLAL-TPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNA 174
Query: 62 NIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNKGTAKH-PCSTYSIANISYE 120
+GKLRS+FLGT F +YD+ P+N S +GK SRRF++K + P + + ++SY+
Sbjct: 175 YVGKLRSDFLGTNFTVYDSQPPHNGAKPS-NGKASRRFASKQISPQVPAGNFEVGHVSYK 233
Query: 121 LNVFGTRGPRRM 132
N+ +RGPRRM
Sbjct: 234 FNLLKSRGPRRM 245
>AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399
Length = 398
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 28/102 (27%)
Query: 220 NKAPRWHEQLQCWCLNFR--GRVTV---ASVKNFQLIXXXXXXXXXXXXXXXXXXXXXEH 274
NK + HE L+FR GR + +SVKNFQL
Sbjct: 318 NKISKQHE------LDFRDRGRTGLRIQSSVKNFQLTLTQETPR---------------- 355
Query: 275 DKVILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLAC 316
+ ILQ G+V K + +D+ YP S +QAF I L+S D+KL C
Sbjct: 356 -QTILQMGRVDKARYVIDFRYPFSGYQAFCICLASIDSKLCC 396
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,778,493
Number of extensions: 203233
Number of successful extensions: 444
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 422
Number of HSP's successfully gapped: 18
Length of query: 317
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 218
Effective length of database: 8,392,385
Effective search space: 1829539930
Effective search space used: 1829539930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)