BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0157000 Os11g0157000|Os11g0157000
(1601 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75660.1 | chr1:28408289-28414825 FORWARD LENGTH=1021 330 3e-90
AT1G54490.1 | chr1:20350300-20356650 FORWARD LENGTH=948 238 2e-62
AT5G42540.2 | chr5:17007513-17014534 FORWARD LENGTH=1024 229 1e-59
ATMG00300.1 | chrM:89617-90054 REVERSE LENGTH=146 107 4e-23
ATMG00710.1 | chrM:207553-207915 REVERSE LENGTH=121 94 5e-19
>AT1G75660.1 | chr1:28408289-28414825 FORWARD LENGTH=1021
Length = 1020
Score = 330 bits (847), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 238/677 (35%), Positives = 324/677 (47%), Gaps = 121/677 (17%)
Query: 824 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 883
VILSDANVPGEGEHKIMS+IR QR G+DPNTRHCLYGLDADLIML LA+HEVHFSILR
Sbjct: 193 VILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLGLATHEVHFSILR 252
Query: 884 EEVLHQNNQENTIPITPKT-FTSQEAEKFKCRAWFPRITEARPEGK-LTKKPYQFLNIWV 941
E V QE F S K K RA ++ + +G KKPYQFL+IWV
Sbjct: 253 EVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAG---ESDEKGDGNDFVKKPYQFLHIWV 309
Query: 942 LREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEVYK 1001
LREYLEL+M+IPNP +D+ER++DDF+FICF GNDF+PH+P+LEI EGAI+LL+ VYK
Sbjct: 310 LREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYK 369
Query: 1002 TSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLK-CYDLARGFEDFGR 1060
F GY+ D K + R+E+F + +E+KIF K R E R
Sbjct: 370 KEFRSFDGYLTDGCKPN--------LKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKR 421
Query: 1061 -KVGXXXXXXXXXGSWVAHPFGPSEPDIGAPVACNTWAVPDRVGECRIVXXXXXXXDIKR 1119
K G V +PD+ PVA R R+ +
Sbjct: 422 DKAGKATKRMDDEAPTV-------QPDL-VPVA--------RFSGSRLASAPTPSP-FQS 464
Query: 1120 CQLRENFQRKIERQAAENTWNERNTENVEENLDDQCIMVKSSQTDGQVSDEQDITMNTLE 1179
R +K+ R + ++ V ++ D + S E D N E
Sbjct: 465 NDGRSAPHQKVRRLSPGSS-------------------VGAAIVDVENSLESDERENKEE 505
Query: 1180 LRKNLKDILHNKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQN----- 1234
L+ LK+++ K D + + DK+KLG PGW+ R+++EKF T +E+ +++
Sbjct: 506 LKTKLKELIREKSDAFNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLK 565
Query: 1235 --------------------------------------------EMVTISCFLNYANGIL 1250
E+ T N G+
Sbjct: 566 YTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVF 625
Query: 1251 ----SFALPGCYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVT 1306
S ALP Y LM S I FYP++ ++D +GKR+ WQGIAKLPFI+++ LL
Sbjct: 626 PAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAV 685
Query: 1307 KTAEKDLAVHELRRNTVRQEKIFLRNSNALAKNEAFAQTSDCSLQ--------KLPIDPA 1358
E L E RRN+ + +F+ S+ LA+ F+ + C K+ I P
Sbjct: 686 SEVEFTLTDEEKRRNSRMCDMLFIATSHRLAE-LVFSLDNHCRQLSARERVDFKVKIKPK 744
Query: 1359 TSE-IGGWLSPDDDDFSNGFCGSPIEN------DLSISAKFFNPEAVKPATRLLQNVTVP 1411
S+ + G+L+P + SP+E + I + P+A + TR V P
Sbjct: 745 LSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHITRPPPGVIFP 804
Query: 1412 YKTVTEADICARP-LWH 1427
KTV D+ P LWH
Sbjct: 805 KKTVDIGDLKPPPALWH 821
>AT1G54490.1 | chr1:20350300-20356650 FORWARD LENGTH=948
Length = 947
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 153/226 (67%), Gaps = 18/226 (7%)
Query: 824 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 883
VILSD+NVPGEGEHKIMS+IR QR G+DPNTRHCLYGLDADLIML+LA+HEVHFSILR
Sbjct: 194 VILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILR 253
Query: 884 EEVLHQNNQENTIPITPKTFTSQEAEKFK--CRAWFPRITEARPEGKLTKKPYQFLNIWV 941
E + + QE K F + F C A + + KK YQFLNIWV
Sbjct: 254 EVITYPGQQE-------KCFVCGQTGHFASDCPGK-SGSNNAAADIPIHKKKYQFLNIWV 305
Query: 942 LREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEVYK 1001
LREYL+ ++ IP+P ++ ER+IDDFVF+CF GNDF+PH+P+LEI EGAI+LL+ VY+
Sbjct: 306 LREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYR 365
Query: 1002 TSFNKMGGYIVDTDKVKDKHAAYLKVSRLEKFFHELSLYEEKIFLK 1047
F MGGY+ D+ +V + R+E F +++ E+KIF K
Sbjct: 366 KEFTAMGGYLTDSGEV--------LLDRVEHFIQAVAVNEDKIFQK 403
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 136/300 (45%), Gaps = 84/300 (28%)
Query: 1203 DKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEM----VTISCFL--NYANGILSF---- 1252
DKIKLG PG+K R++ EKF +E +++ +M V C++ Y G+ S+
Sbjct: 435 DKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCSWQWFY 494
Query: 1253 -------------------------------------------ALPGCYSKLMDCDESAI 1269
ALPG Y KLM S I
Sbjct: 495 PYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPSSPI 554
Query: 1270 QAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHELRRNTVRQEKIF 1329
FYP++ ++D +GKR+ WQGIAKLPFIE+KLLL+ T+ E+ L V E +RN+V + ++
Sbjct: 555 LKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLDLLY 614
Query: 1330 LRNSNALAKN----EAFAQ---TSDCSLQKLP--IDPATSE-IGGWLSPDDDDFS--NGF 1377
+ ++ L + F Q +C LP IDP +S+ + G+L FS NGF
Sbjct: 615 VHPAHPLGQRILQYYHFYQHMPPHEC----LPWMIDPNSSQGMNGFLW-----FSERNGF 665
Query: 1378 ---CGSP------IENDLSISAKFFNPEAVKPATRLLQNVTVPYKTVTEADICA-RPLWH 1427
SP IE + +++ + P + + +P K +T DI PLWH
Sbjct: 666 QTRVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWH 725
>AT5G42540.2 | chr5:17007513-17014534 FORWARD LENGTH=1024
Length = 1023
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 159/264 (60%), Gaps = 44/264 (16%)
Query: 800 VAYALSVAEEIEGNAEPSTYSEAIVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHC 859
+++AL + N++P + VILSDANVPGEGEHKIMS+IR + GY+PNT HC
Sbjct: 172 LSFALRYYIHVRLNSDPG-WKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHC 230
Query: 860 LYGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPITPKTFTSQEAEKFKCRAWFPR 919
LYGLDADLIML+LA+HE+HFSILRE V F +E + F C R
Sbjct: 231 LYGLDADLIMLSLATHEIHFSILREVVF---------------FPGEEGKCFLCGQEGHR 275
Query: 920 ITEARPEGKL----------------TKKPYQFLNIWVLREYLELDMKIPNPIQTLDVER 963
+ EGK+ KKPY+F+NIW+LREYLE DM+IP + LD R
Sbjct: 276 AADC--EGKIKRKTGEMLDNTEADVVVKKPYEFVNIWILREYLEHDMQIPGAKKNLD--R 331
Query: 964 MIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEVYKTSFNKMGGYIVDTDKVKDKHAA 1023
+IDDF+FICF GNDF+PH+P+LEI EGAI+LL+ VYK F Y+ D+ K
Sbjct: 332 LIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSK------- 384
Query: 1024 YLKVSRLEKFFHELSLYEEKIFLK 1047
L + +E+F + +YE +IF K
Sbjct: 385 -LNLRNVERFIKAVGMYENQIFQK 407
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 81/319 (25%)
Query: 1190 NKQDLIKTGACKHDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVTIS----CFL-- 1243
+K D ++G + DK+KL GW+ R+++EKF A++ +E+ +++ ++V C++
Sbjct: 508 DKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMH 567
Query: 1244 NYANGILSF-----------------------------------------------ALPG 1256
Y +G+ S+ ALP
Sbjct: 568 YYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPE 627
Query: 1257 CYSKLMDCDESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVH 1316
CY LM +S I FYP++ +ID +GKRY WQGI+KLPF+E+K LL EK L
Sbjct: 628 CYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNE 687
Query: 1317 ELRRNTVRQEKIFLRNSNALAK--NEAFAQTSDCSLQKLP-----IDPATSE-------- 1361
E+RRN+ + +F+ S+ L + ++T++ S ++ IDP SE
Sbjct: 688 EIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDV 747
Query: 1362 ----IGGWL-SPDDDDFSNGFCGS--PIENDLS---ISAKFFNPEAVKPA--TRLLQNVT 1409
+ G++ S D + FC + +E+ L+ I A + PE ++ + T + +
Sbjct: 748 CSDGMNGYIASCGGDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLA 807
Query: 1410 VPYKTVTEADI-CARPLWH 1427
+P KT++ D+ LWH
Sbjct: 808 IPKKTISLVDLKSGGLLWH 826
>ATMG00300.1 | chrM:89617-90054 REVERSE LENGTH=146
Length = 145
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 383 SGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILG--NVAAVSDSLSNSDATNLWHMRL 440
S +G+LKV KG ++K + + +LY L+G+ G N+A + D T LWH RL
Sbjct: 23 SCSEGVLKVLKGCRTILKGN-RHDSLYILQGSVETGESNLAETAK-----DETRLWHSRL 76
Query: 441 GHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLW 500
HM++ G+ L K+G LD + LKFCE CI+GK RV F+T HTT+ LDYVHSDLW
Sbjct: 77 AHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLW 136
Query: 501 G-PARKTSF 508
G P+ SF
Sbjct: 137 GAPSVPLSF 145
>ATMG00710.1 | chrM:207553-207915 REVERSE LENGTH=121
Length = 120
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 55/83 (66%)
Query: 599 MNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSD 658
MNRTII K R +L GLPK F A+A +TA ++IN+ PS AI+ P EVW S YS
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 659 LRVFGCTAYAHVDNGKLEPRAIK 681
LR FGC AY H D GKL+PRA K
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKK 83
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 32,393,445
Number of extensions: 1392401
Number of successful extensions: 3402
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3394
Number of HSP's successfully gapped: 10
Length of query: 1601
Length of database: 11,106,569
Length adjustment: 112
Effective length of query: 1489
Effective length of database: 8,035,977
Effective search space: 11965569753
Effective search space used: 11965569753
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 119 (50.4 bits)