BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0153400 Os11g0153400|AK071807
(479 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22400.1 | chr5:7423050-7425335 REVERSE LENGTH=467 400 e-112
AT3G11490.1 | chr3:3617523-3619567 REVERSE LENGTH=436 386 e-107
AT4G03100.1 | chr4:1374361-1375913 FORWARD LENGTH=431 362 e-100
AT2G46710.1 | chr2:19192105-19194656 FORWARD LENGTH=456 362 e-100
AT1G08340.1 | chr1:2631308-2632669 FORWARD LENGTH=332 360 1e-99
>AT5G22400.1 | chr5:7423050-7425335 REVERSE LENGTH=467
Length = 466
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/409 (51%), Positives = 258/409 (63%), Gaps = 71/409 (17%)
Query: 87 CGMEIGWPTDVQHVAHVTFDRFHGFLGLPVELEPEVPRRAPSASASVFGVSTESMQCSYD 146
C MEIGWPT+V+HVAHVTFDRF+GFLGLPVE EPEVPRRAPSASA+VFGVSTESMQ SYD
Sbjct: 113 CSMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYD 172
Query: 147 SRGNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPDGIDIHCLS 206
SRGN VPTILL+MQ LY QGGL+AEGIFR+ AENS+EE VR+QLN G +P+ ID+HCL+
Sbjct: 173 SRGNCVPTILLLMQNCLYSQGGLQAEGIFRLTAENSEEEAVREQLNRGFIPERIDVHCLA 232
Query: 207 GLIKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCXXXXXXXXXXWAVNLMADVVQE 266
GLIKAWFRELP+ VLDS+ PEQVMQCQ+EE+ + + WA+NLMADVVQ
Sbjct: 233 GLIKAWFRELPTSVLDSLSPEQVMQCQTEEENVELVRLLPPTEAALLDWAINLMADVVQY 292
Query: 267 EQINKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQESNLEDTSL 326
E +NKMN+RNIAMVFAPNMTQM DPLTALMYAVQVMNFLK LI+KTL+ RQ+S +E
Sbjct: 293 EHLNKMNSRNIAMVFAPNMTQMDDPLTALMYAVQVMNFLKTLIEKTLRERQDSVVEQAHA 352
Query: 327 PHKDPSDESGHHKPCXXXXXXXXXXXRRPSFVEEEPILNSPAHGTGYNPIEVNPVQGKTA 386
+PSDESGH SP+ +N E
Sbjct: 353 FPLEPSDESGHQ---------------------------SPSQSLAFNTSE--------- 376
Query: 387 ASIAQTSEVQT--IIEGSSSCSRPSLTDPPATADPVCAEAANSLQRKGSRSLNSRRTRKG 444
Q+ E Q+ I + S ++D + C + R T G
Sbjct: 377 ----QSEETQSDNIENAENQSSSSEISDELTLENNACEQ---------------RETDFG 417
Query: 445 KGQSGTSATSSAE--------------KSKGTSIVSRINSKIERIEAWR 479
K ++G + SS + ++KG + +SR+ S++ER EAWR
Sbjct: 418 KYRTGRLSDSSQQVVLNLDPPAQWPVGRTKGLTNLSRVGSRVERTEAWR 466
>AT3G11490.1 | chr3:3617523-3619567 REVERSE LENGTH=436
Length = 435
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 180/246 (73%), Positives = 204/246 (82%), Gaps = 2/246 (0%)
Query: 87 CGMEIGWPTDVQHVAHVTFDRFHGFLGLPVELEPEVPRRAPSASASVFGVSTESMQCSYD 146
C MEIG PTDV+HVAHVTFDRFHGFLGLPVE EPEVPRRAPSASA+VFGVSTESMQ SYD
Sbjct: 89 CSMEIGVPTDVRHVAHVTFDRFHGFLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYD 148
Query: 147 SRGNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPDGIDIHCLS 206
+RGN VPTILLMMQ LY +GGLR EGIFRIN EN QEE++R++LN GI+PD ID+HCL+
Sbjct: 149 TRGNIVPTILLMMQSHLYSRGGLRVEGIFRINGENGQEEYIREELNKGIIPDNIDVHCLA 208
Query: 207 GLIKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCXXXXXXXXXXWAVNLMADVVQE 266
LIKAWFRELPSGVLDS+ PEQVM+ +SE++C + + WA+NLMADVV+
Sbjct: 209 SLIKAWFRELPSGVLDSLSPEQVMESESEDECVELVRLLPSTEASLLDWAINLMADVVEM 268
Query: 267 EQINKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQESNLEDTSL 326
EQ+NKMNARNIAMVFAPNMTQM DPLTALMYAVQVMNFLK LI KTLK R+ES D +
Sbjct: 269 EQLNKMNARNIAMVFAPNMTQMLDPLTALMYAVQVMNFLKTLIVKTLKDRKES--RDKLV 326
Query: 327 PHKDPS 332
P +PS
Sbjct: 327 PASNPS 332
>AT4G03100.1 | chr4:1374361-1375913 FORWARD LENGTH=431
Length = 430
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/252 (67%), Positives = 197/252 (78%), Gaps = 8/252 (3%)
Query: 76 RCSTVQEGGGECG--------MEIGWPTDVQHVAHVTFDRFHGFLGLPVELEPEVPRRAP 127
R Q+ GG G MEIGWPT+V+H+ HVTFDRFHGFLGLP EL+ E+P R P
Sbjct: 57 RVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHITHVTFDRFHGFLGLPHELQVEIPCRVP 116
Query: 128 SASASVFGVSTESMQCSYDSRGNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFV 187
SAS SVFGVS ESMQCSYD +GNSVPTILL+MQ RLY Q GL+AEGIFRIN ENSQEE V
Sbjct: 117 SASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQGLKAEGIFRINPENSQEEHV 176
Query: 188 RDQLNSGIVPDGIDIHCLSGLIKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCXXX 247
RDQLN GIVP+ ID+HCL+GLIKAWFRELPSGVLD + PE+V+ C +E++ + K
Sbjct: 177 RDQLNRGIVPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLNCNTEDESVELIKQLKP 236
Query: 248 XXXXXXXWAVNLMADVVQEEQINKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKM 307
WAV+LMADVV+EE+ NKMNARNIAMVFAPNMTQM+DPLTALM+AVQVMN LK
Sbjct: 237 TESALLNWAVDLMADVVEEEESNKMNARNIAMVFAPNMTQMTDPLTALMHAVQVMNLLKT 296
Query: 308 LIQKTLKGRQES 319
LI KTL R+E+
Sbjct: 297 LITKTLAEREEN 308
>AT2G46710.1 | chr2:19192105-19194656 FORWARD LENGTH=456
Length = 455
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/248 (68%), Positives = 202/248 (81%), Gaps = 2/248 (0%)
Query: 89 MEIGWPTDVQHVAHVTFDRFHGFLGLPVELEPEVPRRAPSASASVFGVSTESMQCSYDSR 148
M+IGWPT+V+HV+HVTFDRF+GFLGLP ELEPEVP RAPSAS SVFGVS +SMQCSYD R
Sbjct: 103 MDIGWPTEVKHVSHVTFDRFNGFLGLPSELEPEVPPRAPSASVSVFGVSAKSMQCSYDDR 162
Query: 149 GNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPDGIDIHCLSGL 208
GNSVPTILL MQ+RLY +GGL+AEGIFRIN +N +EE VR QLN G+VP GID+HCL+GL
Sbjct: 163 GNSVPTILLRMQKRLYTEGGLKAEGIFRINPDNGKEEHVRRQLNCGVVPRGIDVHCLAGL 222
Query: 209 IKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCXXXXXXXXXXWAVNLMADVVQEEQ 268
IKAWFRELP+GVLD + PEQVM+C +EEDC+R+ WA+ LMADVV+ EQ
Sbjct: 223 IKAWFRELPTGVLDVLTPEQVMRCNTEEDCSRLVILLPPVESAILDWAIGLMADVVEHEQ 282
Query: 269 INKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQESNLEDTSLPH 328
NKMNARN+AMVFAPNMTQM+DPLTAL++AVQVMNFLK LI LK R+ ++ + L
Sbjct: 283 FNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILMNLKERENADAKARWLKK 342
Query: 329 K--DPSDE 334
+ DPS+E
Sbjct: 343 QTSDPSEE 350
>AT1G08340.1 | chr1:2631308-2632669 FORWARD LENGTH=332
Length = 331
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 161/232 (69%), Positives = 196/232 (84%)
Query: 89 MEIGWPTDVQHVAHVTFDRFHGFLGLPVELEPEVPRRAPSASASVFGVSTESMQCSYDSR 148
M+IG PT+++HVAHVTFDRF GFLGLP E EP+VPR+APSASA+VFGVSTESMQ SYDSR
Sbjct: 1 MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60
Query: 149 GNSVPTILLMMQRRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPDGIDIHCLSGL 208
GN VP ILL++Q RLY+QGGL+AEG+FRI ENS+EEFVR+QLN GI+PDGID+HCL+GL
Sbjct: 61 GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120
Query: 209 IKAWFRELPSGVLDSIPPEQVMQCQSEEDCARVAKCXXXXXXXXXXWAVNLMADVVQEEQ 268
IKAWFRELP GVLD +P EQVMQC+S+ED +V + WA+NLMADV+Q E
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180
Query: 269 INKMNARNIAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQESN 320
+NKMN+RN+A+VFAPNM+QM+DPLTALMYAVQVM LK L +KT++ R+ S+
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREASS 232
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,024,541
Number of extensions: 343364
Number of successful extensions: 769
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 769
Number of HSP's successfully gapped: 5
Length of query: 479
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 377
Effective length of database: 8,310,137
Effective search space: 3132921649
Effective search space used: 3132921649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)