BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0148600 Os11g0148600|AK100066
         (186 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49210.1  | chr5:19950093-19951464 FORWARD LENGTH=196           82   2e-16

>AT5G49210.1 | chr5:19950093-19951464 FORWARD LENGTH=196
          Length = 195

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%)

Query: 30  EPHEFSKPSDYLGSWEPAGDPREAWARLERLRKGYARDVRQLRRQYSYEMQXXXXXXXXX 89
           E H F +P  Y+GSWE   DP++A  +L +LR+ YA+ VR  R++Y +E++         
Sbjct: 39  ETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRVYRKEYIHEIEMLRVEKQRK 98

Query: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDFRQALMKERAEKLESWREKEKLKV 149
                                             ++FRQ L+KERAEKLE W+   + + 
Sbjct: 99  DEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTLIKERAEKLEMWKMMGQKRE 158

Query: 150 QKKADHRELLRKKSSMWVAEDKLETTILDAIKNTTAL 186
           +K  +  +LLR++SS+W+ + +LE  I +A+ +   L
Sbjct: 159 EKIKEREKLLREQSSLWIEQKELERKITEALVDNVVL 195



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.126    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,840,796
Number of extensions: 93351
Number of successful extensions: 522
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 522
Number of HSP's successfully gapped: 2
Length of query: 186
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 93
Effective length of database: 8,556,881
Effective search space: 795789933
Effective search space used: 795789933
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 108 (46.2 bits)