BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0134700 Os11g0134700|AK064966
(341 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04200.1 | chr5:1153893-1154870 FORWARD LENGTH=326 315 2e-86
AT1G79340.1 | chr1:29842849-29844368 FORWARD LENGTH=419 179 2e-45
AT1G79310.1 | chr1:29833986-29835412 FORWARD LENGTH=404 177 7e-45
AT1G79330.1 | chr1:29838722-29840137 FORWARD LENGTH=411 175 3e-44
AT1G79320.1 | chr1:29836686-29837908 FORWARD LENGTH=369 174 5e-44
AT1G16420.1 | chr1:5612304-5613829 REVERSE LENGTH=382 155 3e-38
AT1G02170.1 | chr1:411883-413426 FORWARD LENGTH=368 97 2e-20
AT4G25110.1 | chr4:12887738-12889953 REVERSE LENGTH=419 92 5e-19
AT5G64240.2 | chr5:25695836-25697249 FORWARD LENGTH=363 91 8e-19
>AT5G04200.1 | chr5:1153893-1154870 FORWARD LENGTH=326
Length = 325
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/329 (53%), Positives = 206/329 (62%), Gaps = 24/329 (7%)
Query: 6 KKKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGA 65
KK+LA LVGCNY T NEL GCINDV AM++ +++RFGF D+ VLTD+ S V PTGA
Sbjct: 8 KKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPESKVKPTGA 67
Query: 66 NIKRALADMV--ARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDV 123
NIK AL MV A+A GD+LFFHYSGHGT +P VK H + DEAIVPCDFNLITDV
Sbjct: 68 NIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSA-HPFKQ-DEAIVPCDFNLITDV 125
Query: 124 DFRRLVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSVLXXXXXXXXXXXXXXXXXXXX 183
DFR LV+++P+G SFTM+SDSCHSGGLID EKEQIGPS +
Sbjct: 126 DFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSSV----SSNISPAIETTNKTIT 181
Query: 184 XRFLPYAAVVEHLSGVSGXXXXXXXXXXXXXXFGADASAKFHRDAEQPV----------R 233
R LP+ AV++HLS ++G FG DA KF A + +
Sbjct: 182 SRALPFKAVLDHLSSLTG-ITTSDIGTHLLELFGRDAGLKFRLPAMDLMDLLETMTAREK 240
Query: 234 TDDDGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMA 293
D GIL+SGCQ DETSADV GKA GAFSNAIQ VL + + N+QLV MA
Sbjct: 241 HVDSGILMSGCQADETSADVG-----VGNGKAYGAFSNAIQRVLNENEGAMKNKQLVMMA 295
Query: 294 RAVLSDQGFEQHPCLYCSDGNAETPFLWQ 322
R VL GF QHPCLYCSD NA+ FL Q
Sbjct: 296 RDVLERLGFHQHPCLYCSDQNADATFLSQ 324
>AT1G79340.1 | chr1:29842849-29844368 FORWARD LENGTH=419
Length = 418
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
Query: 8 KLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGANI 67
K A L+G NY GT EL+GC+NDV M LV R+GF+ ++TVL D S PTG NI
Sbjct: 3 KKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGKNI 62
Query: 68 KRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFRR 127
+RALAD+V A GDVL HYSGHGT +P G G DE IVPCD NLITD DFR
Sbjct: 63 RRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTG-FDECIVPCDMNLITDDDFRD 121
Query: 128 LVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPSV 162
LVD+VP G T++SDSCHSGGLID KEQIG S
Sbjct: 122 LVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGEST 156
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 236 DDGILLSGCQTDETSADVPGDDEVAAGG--KACGAFSNAIQTVLASHPAPVSNRQLVSMA 293
D GIL+SGCQTD+TSAD AG +A GA SN+IQT+L +SNR++V+ A
Sbjct: 336 DSGILISGCQTDQTSADA-----TPAGKPTEAYGAMSNSIQTILEETDGEISNREMVTRA 390
Query: 294 RAVLSDQGFEQHPCLYCSDGNAETPFL 320
R L QGF Q P LYC DG A PF+
Sbjct: 391 RKALKKQGFTQQPGLYCHDGYANAPFI 417
>AT1G79310.1 | chr1:29833986-29835412 FORWARD LENGTH=404
Length = 403
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/154 (59%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 8 KLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGANI 67
K A L+G NY GT ELQGC+NDV M LV RFGFA D+TVL D S PTG NI
Sbjct: 3 KRALLIGINYPGTTEELQGCVNDVHRMHKCLVDRFGFAEEDITVLIDTDESYTQPTGKNI 62
Query: 68 KRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFRR 127
++AL++++ A GDVLF HYSGHGT VPP G G DE IVP D N I D DFR
Sbjct: 63 RQALSELIKPAKSGDVLFVHYSGHGTRVPPETGEEDDTG-FDECIVPSDLNPIPDDDFRD 121
Query: 128 LVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPS 161
LV++VP G T+VSDSCHSGGLID KEQIG S
Sbjct: 122 LVEQVPEGCQITIVSDSCHSGGLIDEAKEQIGES 155
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
Query: 236 DDGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLAS--HPAPVSNRQLVSMA 293
D GILLSGCQTDETSADV G+A GAFSNAIQ VL+ H ++N+++V A
Sbjct: 322 DRGILLSGCQTDETSADV------KKKGEAFGAFSNAIQMVLSETDHKDKITNKEMVLRA 375
Query: 294 RAVLSDQGFEQHPCLYCSDGNAETPFL 320
R +L Q F Q P LYC+D PF+
Sbjct: 376 REILKKQMFIQRPGLYCNDRFVNAPFI 402
>AT1G79330.1 | chr1:29838722-29840137 FORWARD LENGTH=411
Length = 410
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 105/154 (68%), Gaps = 1/154 (0%)
Query: 8 KLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGANI 67
K A L+G NY GT EL+GC+NDV + +LV RFGF+ ++T L D S PTG NI
Sbjct: 3 KKAVLIGINYPGTKAELRGCVNDVRRVHKSLVDRFGFSERNITELIDTDESSTKPTGKNI 62
Query: 68 KRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFRR 127
+RAL ++V A PGDVL HYSGHGT +P G G DE IVPCD NLITD +FR
Sbjct: 63 RRALLNLVESAKPGDVLVVHYSGHGTRLPAETGEDDDTG-YDECIVPCDMNLITDDEFRD 121
Query: 128 LVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPS 161
LV++VP+ A T++SDSCHSGGLID KEQIG S
Sbjct: 122 LVEKVPKEAHITIISDSCHSGGLIDEAKEQIGES 155
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 236 DDGILLSGCQTDETSADVP--GDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMA 293
D+GIL+SGCQTD+TSAD G E+A G AF+NA+Q +L ++ ++LV A
Sbjct: 328 DNGILISGCQTDQTSADASPQGHPEMAYG-----AFTNAVQIILEETKGMITYKELVLKA 382
Query: 294 RAVLSDQGFEQHPCLYCSDGNAETPFL 320
R +L QGF Q P LYCSD PF+
Sbjct: 383 RKLLKKQGFSQRPGLYCSDSFVNAPFI 409
>AT1G79320.1 | chr1:29836686-29837908 FORWARD LENGTH=369
Length = 368
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 8 KLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGANI 67
K A L+G NY GT EL+GC+NDV MR +LV R+GF+ ++ +L D S + PTG NI
Sbjct: 3 KKALLIGINYVGTKAELRGCVNDVRRMRISLVERYGFSEENIKMLIDTDSSSIKPTGKNI 62
Query: 68 KRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFRR 127
++AL D+V A GDVLF HYSGHGT +P G G DE IVP D NLITD DFR
Sbjct: 63 RQALLDLVEPAKSGDVLFVHYSGHGTRLPAETGEDDDTG-YDECIVPSDMNLITDDDFRD 121
Query: 128 LVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPS 161
LVD VP+ T++SDSCHSGGLID KEQIG S
Sbjct: 122 LVDMVPKDCPITIISDSCHSGGLIDEAKEQIGES 155
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 236 DDGILLSGCQTDETSADV--PGDDEVAAGGKACGAFSNAIQTVLASHPAPVSNRQLVSMA 293
D+GIL+SGCQTD+TS+D PG E+A G A +NAIQ ++ +SN+ LV A
Sbjct: 286 DNGILISGCQTDQTSSDASPPGHPELAYG-----ALTNAIQIIIGETKGKISNKDLVLKA 340
Query: 294 RAVLSDQGFEQHPCLYCSDGNAETPFL 320
R +L QGF+Q P LYC+D F+
Sbjct: 341 RKLLRKQGFDQRPGLYCNDAYVNARFI 367
>AT1G16420.1 | chr1:5612304-5613829 REVERSE LENGTH=382
Length = 381
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 93/154 (60%)
Query: 8 KLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPVLPTGANI 67
K A L+G NY GT EL+GC+NDV M+ L+ +GFA D+ ++ D S + PTG NI
Sbjct: 3 KKALLIGINYPGTAVELRGCVNDVHRMQKCLIELYGFANKDIVIMIDTDKSCIQPTGKNI 62
Query: 68 KRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDFNLITDVDFRR 127
L +++A GD L FHYSGHGT +PP DE I PCD NLI D FR
Sbjct: 63 CDELDNLIASGQSGDFLVFHYSGHGTRIPPGIEDSEDPTGFDECITPCDMNLIKDQQFRE 122
Query: 128 LVDRVPRGASFTMVSDSCHSGGLIDLEKEQIGPS 161
+V RV G T++SDSCHSGGLI KEQIG S
Sbjct: 123 MVSRVKEGCQLTIISDSCHSGGLIQEVKEQIGES 156
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Query: 236 DDGILLSGCQTDETSADVPGDDEVAAGGKACGAFSNAIQTVLAS---HPAPVSNRQLVSM 292
D+GILLSGCQTD+ S DV V GKA GAFS+AIQ +L++ ++N++LVS
Sbjct: 296 DNGILLSGCQTDQRSEDV----YVTRTGKAYGAFSDAIQMILSAPRKDKKKITNKELVSE 351
Query: 293 ARAVLSDQGFEQHPCLYCSDGNAETPFL 320
AR L +G+ Q P LYC D + PF+
Sbjct: 352 ARVFLKKRGYSQRPGLYCHDRFVDKPFI 379
>AT1G02170.1 | chr1:411883-413426 FORWARD LENGTH=368
Length = 367
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 13/155 (8%)
Query: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPV-LPTGA 65
+K A + G +Y + +EL+GCIND MR L+ +F F+P + +LT++ P +PT
Sbjct: 79 RKRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDSILMLTEEETDPYRIPTKQ 138
Query: 66 NIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGEC---DEAIVPCDFN---L 119
N++ AL +V GD L FHYSGHG+ + R + E DE + P DF +
Sbjct: 139 NMRMALYWLVQGCTAGDSLVFHYSGHGS-----RQRNYNGDEVDGYDETLCPLDFETQGM 193
Query: 120 ITDVDFRRLVDR-VPRGASFTMVSDSCHSGGLIDL 153
I D + + R +P G + D+CHSG ++DL
Sbjct: 194 IVDDEINATIVRPLPHGVKLHSIIDACHSGTVLDL 228
>AT4G25110.1 | chr4:12887738-12889953 REVERSE LENGTH=419
Length = 418
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 17/160 (10%)
Query: 3 RGQKKKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPV-L 61
GQK+ A +VG +Y T +EL+GCIND M+ L+ RF F + + +LT++ P+
Sbjct: 113 HGQKR--AVIVGVSYKNTKDELKGCINDANCMKFMLMKRFQFPESCILMLTEEEADPMRW 170
Query: 62 PTGANIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGE----CDEAIVPCDF 117
PT NI A+ +V PGD L FH+SGHG + +G+ DE ++P D
Sbjct: 171 PTKNNITMAMHWLVLSCKPGDSLVFHFSGHG------NNQMDDNGDEVDGFDETLLPVDH 224
Query: 118 N---LITDVDFRRLVDR-VPRGASFTMVSDSCHSGGLIDL 153
+I D + + R +P G + D+CHSG ++DL
Sbjct: 225 RTSGVIVDDEINATIVRPLPYGVKLHAIVDACHSGTVMDL 264
>AT5G64240.2 | chr5:25695836-25697249 FORWARD LENGTH=363
Length = 362
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 7 KKLATLVGCNYAGTPNELQGCINDVAAMRDALVARFGFAPADVTVLTDDRGSPV-LPTGA 65
KK A L G NY G L+GCI+D +MR LV + GF + +LT+D SP +PT
Sbjct: 89 KKRAVLCGVNYKGKSYSLKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIPTKR 148
Query: 66 NIKRALADMVARAAPGDVLFFHYSGHGTLVPPVKGRRHGHGECDEAIVPCDF----NLIT 121
NI++A+ +V D L FH+SGHG+ G G+ DEA+ P D +I
Sbjct: 149 NIRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNG-DEIDGQ-DEALCPLDHETEGKIID 206
Query: 122 DVDFRRLVDRVPRGASFTMVSDSCHSGGLIDL 153
D R LV + GA V D+C+SG ++DL
Sbjct: 207 DEINRILVRPLVHGAKLHAVIDACNSGTVLDL 238
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,722,630
Number of extensions: 257654
Number of successful extensions: 570
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 547
Number of HSP's successfully gapped: 14
Length of query: 341
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 242
Effective length of database: 8,392,385
Effective search space: 2030957170
Effective search space used: 2030957170
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)