BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0129100 Os11g0129100|Os11g0129100
(112 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33110.1 | chr1:12005084-12008618 FORWARD LENGTH=495 96 4e-21
AT1G33100.1 | chr1:11997683-12001308 FORWARD LENGTH=492 95 6e-21
AT1G33090.1 | chr1:11993458-11996542 FORWARD LENGTH=495 93 3e-20
AT1G33080.1 | chr1:11985752-11990327 FORWARD LENGTH=495 93 3e-20
AT5G65380.1 | chr5:26123241-26126352 REVERSE LENGTH=487 72 5e-14
AT5G10420.1 | chr5:3273578-3276490 REVERSE LENGTH=490 70 3e-13
AT5G17700.1 | chr5:5831025-5833415 REVERSE LENGTH=498 65 1e-11
AT5G44050.1 | chr5:17722484-17726209 FORWARD LENGTH=492 64 1e-11
AT3G03620.1 | chr3:873904-876252 REVERSE LENGTH=501 59 6e-10
AT1G12950.1 | chr1:4419849-4422462 FORWARD LENGTH=523 55 9e-09
AT3G26590.1 | chr3:9761927-9765259 REVERSE LENGTH=501 54 2e-08
AT1G23300.1 | chr1:8263827-8266048 REVERSE LENGTH=516 51 1e-07
AT1G47530.1 | chr1:17451724-17454110 FORWARD LENGTH=485 49 4e-07
AT5G38030.1 | chr5:15171486-15175302 REVERSE LENGTH=499 49 6e-07
AT4G25640.2 | chr4:13076576-13078965 REVERSE LENGTH=515 48 1e-06
AT4G00350.1 | chr4:151978-153988 FORWARD LENGTH=543 47 2e-06
>AT1G33110.1 | chr1:12005084-12008618 FORWARD LENGTH=495
Length = 494
Score = 95.9 bits (237), Expect = 4e-21, Method: Composition-based stats.
Identities = 44/76 (57%), Positives = 62/76 (81%), Gaps = 1/76 (1%)
Query: 33 EDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVS 92
E+++E+G L ++V +ESKKLW+VA P+I RFSTFGV++ISQ+FIGH+G ELA Y++
Sbjct: 22 EEKDELG-LKQKVWIESKKLWIVAAPAIFTRFSTFGVSIISQSFIGHLGPIELAAYSITF 80
Query: 93 TVLMRFSGGILVTILS 108
TVL+RFS GIL+ + S
Sbjct: 81 TVLLRFSNGILLGMAS 96
>AT1G33100.1 | chr1:11997683-12001308 FORWARD LENGTH=492
Length = 491
Score = 95.1 bits (235), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 33 EDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVS 92
E+E+E+G + +V +ESKKLWVVA P+I R+STFGV++++QAFIGH+G TELA Y++
Sbjct: 19 EEEDELG-MKEKVWIESKKLWVVAAPAIFTRYSTFGVSMVTQAFIGHLGPTELAAYSITF 77
Query: 93 TVLMRFSGGILV 104
T+L+RFS GIL+
Sbjct: 78 TILLRFSNGILL 89
>AT1G33090.1 | chr1:11993458-11996542 FORWARD LENGTH=495
Length = 494
Score = 92.8 bits (229), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 33 EDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVS 92
E+ +E+G L +V +ESKKLWVVA PSI +FST+GV++++Q F+GH+G TELA Y++
Sbjct: 22 EENDELG-LKEKVWIESKKLWVVAAPSIFTKFSTYGVSLVTQGFVGHIGPTELAAYSITF 80
Query: 93 TVLMRFSGGILVTILS 108
TVL+RFS GIL+ + S
Sbjct: 81 TVLLRFSNGILLGMAS 96
>AT1G33080.1 | chr1:11985752-11990327 FORWARD LENGTH=495
Length = 494
Score = 92.8 bits (229), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/82 (56%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 27 SNNKQEEDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELA 86
S + ED + +G + +V ESKKLWVVAGP+I RFST G+++ISQAFIGH+G+TELA
Sbjct: 16 STENRGEDRDGLG-MKEKVWRESKKLWVVAGPAIFTRFSTSGLSLISQAFIGHLGSTELA 74
Query: 87 GYALVSTVLMRFSGGILVTILS 108
Y++ TVL+RFS GIL+ + S
Sbjct: 75 AYSITLTVLLRFSNGILLGMAS 96
>AT5G65380.1 | chr5:26123241-26126352 REVERSE LENGTH=487
Length = 486
Score = 72.4 bits (176), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
Query: 5 GDEHDDCRTVPLLEPKHAHGEGSNNKQEEDEEEVGSLGRRVLVESKKLWVVAGPSICARF 64
G+E + R L P A EED E L R+LVE+KKLW + GP+I +R
Sbjct: 6 GEEGSESRVALLKSPHTA---------EEDGE---GLKDRILVETKKLWQIVGPAIFSRV 53
Query: 65 STFGVTVISQAFIGHVGATELAGYALVSTVLMRFSGGILVTILS 108
+T+ + VI+QAF GH+G ELA ++V+ V + F+ G+L+ + S
Sbjct: 54 TTYSMLVITQAFAGHLGDLELAAISIVNNVTVGFNFGLLLGMAS 97
>AT5G10420.1 | chr5:3273578-3276490 REVERSE LENGTH=490
Length = 489
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Query: 13 TVPLLEPKHAHGEGSNNKQEEDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVI 72
TVPLLE +A EG G + R + +E+KK+W + GPSI +T+ + +I
Sbjct: 15 TVPLLECHNAAEEG------------GGMKREIWIETKKIWYIVGPSIFTGLATYSILII 62
Query: 73 SQAFIGHVGATELAGYALVSTVLMRFSGGILVTILS 108
+QAF GH+G ELA ++++ + F+ G+L+ + S
Sbjct: 63 TQAFAGHLGDLELAAISIINNFTLGFNYGLLLGMAS 98
>AT5G17700.1 | chr5:5831025-5833415 REVERSE LENGTH=498
Length = 497
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 28 NNKQEEDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAG 87
N + E E L +++ E +K+W +A PS R +FG V++QAFIGH T LA
Sbjct: 14 NGSETEQRRESLYLRKKIWSEVRKMWRIALPSTLFRVMSFGCVVVAQAFIGHSSETGLAA 73
Query: 88 YALVSTVLMRFSGGILVTILSTHYT 112
YAL+ + +RF GI+ + S T
Sbjct: 74 YALLQSTFIRFIYGIMAGMSSATET 98
>AT5G44050.1 | chr5:17722484-17726209 FORWARD LENGTH=492
Length = 491
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 31 QEEDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYAL 90
Q EEE G + + + +E+KKLW + GP+I R +T + VI+QAF GH+G ELA ++
Sbjct: 23 QNVAEEENGEIKKEIWLETKKLWRIVGPAIFTRVTTNLIFVITQAFAGHLGELELAAISI 82
Query: 91 VSTVLMRFSGGILV 104
V+ V++ F+ + +
Sbjct: 83 VNNVIIGFNYSLFI 96
>AT3G03620.1 | chr3:873904-876252 REVERSE LENGTH=501
Length = 500
Score = 58.5 bits (140), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 26 GSNNKQEEDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATEL 85
GS+ + + + E L +V E K+W +A PS R ++FG +++QAFIGH L
Sbjct: 15 GSDAEGQSNNRESIYLRTKVWSEVNKMWRIALPSSLFRMTSFGSIIVAQAFIGHSSELGL 74
Query: 86 AGYALVSTVLMRFSGGIL 103
A YAL+ + +RF G++
Sbjct: 75 AAYALLQSTFIRFLYGLM 92
>AT1G12950.1 | chr1:4419849-4422462 FORWARD LENGTH=523
Length = 522
Score = 54.7 bits (130), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 38 VGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVSTVLMR 97
VG R +ES+KLW +AGP+I S + + ++Q F GH+ LA ++ ++V+
Sbjct: 57 VGDFVREFRIESRKLWKLAGPAIFTTMSQYSLGAVTQVFAGHISTLALAAVSIENSVIAG 116
Query: 98 FSGGILV 104
FS GI++
Sbjct: 117 FSFGIML 123
>AT3G26590.1 | chr3:9761927-9765259 REVERSE LENGTH=501
Length = 500
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 38 VGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVSTVLMR 97
VG R VE+KKLW +AGP+I + + + I+Q F GH+ LA ++ ++V+
Sbjct: 35 VGGFVREFNVETKKLWYLAGPAIFTSVNQYSLGAITQVFAGHISTIALAAVSVENSVVAG 94
Query: 98 FSGGILV 104
FS GI++
Sbjct: 95 FSFGIML 101
>AT1G23300.1 | chr1:8263827-8266048 REVERSE LENGTH=516
Length = 515
Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 43 RRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVSTVLMRFSGGI 102
R+ ESKKLW +AGP+I F + + ++Q GHV LA ++ ++V+ FS GI
Sbjct: 39 RQFAAESKKLWWLAGPAIFTSFCQYSLGAVTQILAGHVNTLALAAVSIQNSVISGFSVGI 98
Query: 103 LV 104
++
Sbjct: 99 ML 100
>AT1G47530.1 | chr1:17451724-17454110 FORWARD LENGTH=485
Length = 484
Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 12 RTVPLLEPKHA-HGEGSNNKQEEDEEEVGSLGRRVLVESKKLWVVAGPSICARFSTFGVT 70
+T+PLL+P+ G+ + + +E G ESK+LW +AGP+I S + +
Sbjct: 5 KTLPLLDPREPPELTGTKSASKVWAKEFGE-------ESKRLWELAGPAIFTAISQYSLG 57
Query: 71 VISQAFIGHVGATELAGYALVSTVLMRFSGGILV 104
++Q F G +G ELA ++ ++V+ + G+++
Sbjct: 58 ALTQTFSGRLGELELAAVSVENSVISGLAFGVML 91
>AT5G38030.1 | chr5:15171486-15175302 REVERSE LENGTH=499
Length = 498
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 38 VGSLGRRVLVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVSTVLMR 97
VG + VE KKLW +AGP+I + + + +Q F GH+ LA ++ ++V+
Sbjct: 35 VGGFVKEFNVEVKKLWYLAGPAIFMSITQYSLGAATQVFAGHISTIALAAVSVENSVIAG 94
Query: 98 FSGGILV 104
FS G+++
Sbjct: 95 FSFGVML 101
>AT4G25640.2 | chr4:13076576-13078965 REVERSE LENGTH=515
Length = 514
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 13 TVPLLEPKHAHGEGSNNKQEEDEEEVGSLG--RRVL-VESKKLWVVAGPSICARFSTFGV 69
T PLL HG + EED S +RVL ES KLW++A P +GV
Sbjct: 4 TAPLL----THG----GEVEEDYAPARSWTDVKRVLSTESAKLWMIAAPVGFNIICQYGV 55
Query: 70 TVISQAFIGHVGATELAGYALVSTVLMRFSGGILV 104
+ ++ F+GH+G EL+ ++ +V+ FS G L+
Sbjct: 56 SSVTNIFVGHIGEVELSAVSISLSVIGTFSFGFLL 90
>AT4G00350.1 | chr4:151978-153988 FORWARD LENGTH=543
Length = 542
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 46 LVESKKLWVVAGPSICARFSTFGVTVISQAFIGHVGATELAGYALVSTVLMRFSGGILVT 105
+VE+ KLW +A P +GV + F+GH+G EL+ A+ +V+ FS G L+
Sbjct: 86 VVETSKLWEIAAPIAFNILCNYGVNSFTSIFVGHIGDLELSAVAIALSVVSNFSFGFLLG 145
Query: 106 ILS 108
+ S
Sbjct: 146 MAS 148
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,623,914
Number of extensions: 102147
Number of successful extensions: 494
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 494
Number of HSP's successfully gapped: 16
Length of query: 112
Length of database: 11,106,569
Length adjustment: 81
Effective length of query: 31
Effective length of database: 8,885,873
Effective search space: 275462063
Effective search space used: 275462063
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)