BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0115400 Os11g0115400|AK070414
         (116 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51590.1  | chr3:19135828-19136654 REVERSE LENGTH=120           63   3e-11
AT2G38540.1  | chr2:16130418-16130893 FORWARD LENGTH=119           59   4e-10
AT5G59320.1  | chr5:23929051-23929492 FORWARD LENGTH=116           58   9e-10
AT5G59310.1  | chr5:23925296-23925772 REVERSE LENGTH=113           56   4e-09
AT2G38530.1  | chr2:16128481-16128948 FORWARD LENGTH=119           52   5e-08
AT4G33355.1  | chr4:16067097-16067568 FORWARD LENGTH=120           52   7e-08
AT2G15050.1  | chr2:6518888-6519259 FORWARD LENGTH=124             51   1e-07
AT3G51600.1  | chr3:19138661-19139124 REVERSE LENGTH=119           46   4e-06

>AT3G51590.1 | chr3:19135828-19136654 REVERSE LENGTH=120
          Length = 119

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 44/91 (48%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGIKG 85
           I CG V S +  CLTY              V+SL             C CLK A + IKG
Sbjct: 26  IQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKG 85

Query: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
           LN    A++P+ CGVS+PY IS S +C  +S
Sbjct: 86  LNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116



>AT2G38540.1 | chr2:16130418-16130893 FORWARD LENGTH=119
          Length = 118

 Score = 58.9 bits (141), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGI-K 84
           ++CG VNS +  C+ Y              V++L             CNC++ AAR +  
Sbjct: 27  LSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS 86

Query: 85  GLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
           GLNAG AA IP  CGV++PY IS S +C  V
Sbjct: 87  GLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117



>AT5G59320.1 | chr5:23929051-23929492 FORWARD LENGTH=116
          Length = 115

 Score = 58.2 bits (139), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGIKG 85
           I+CG V  ++ PC TY              V++L             C C+++ A+ I G
Sbjct: 25  ISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISG 84

Query: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRV 115
           LN   A+ +P KCGVS+PY IS S +C+ +
Sbjct: 85  LNPSLASGLPGKCGVSIPYPISMSTNCNNI 114



>AT5G59310.1 | chr5:23925296-23925772 REVERSE LENGTH=113
          Length = 112

 Score = 55.8 bits (133), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGIKG 85
           ITCG V S++ PCL Y              V+ L             C CL++AA   KG
Sbjct: 25  ITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA---KG 81

Query: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRV 115
           +N   A+ +P KCGVS+PY IS S +C+ +
Sbjct: 82  VNPSLASGLPGKCGVSIPYPISTSTNCATI 111



>AT2G38530.1 | chr2:16128481-16128948 FORWARD LENGTH=119
          Length = 118

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGI-K 84
           ++CG VN  +  C+ Y              V +LK            C CL++AA+ +  
Sbjct: 27  MSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGP 86

Query: 85  GLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
           GLN   AA +PS C V++PY ISAS +C+ V
Sbjct: 87  GLNTARAAGLPSACKVNIPYKISASTNCNTV 117



>AT4G33355.1 | chr4:16067097-16067568 FORWARD LENGTH=120
          Length = 119

 Score = 51.6 bits (122), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGIKG 85
           I C QVN  +  CL Y              + SLK            CNCLK+ A  I G
Sbjct: 29  IACPQVNMYLAQCLPYLKAGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPG 88

Query: 86  LNAGNAASIPSKCGVSVPYTISASIDCSRVS 116
           +N   A  +P+KCGV++    S ++DC+ ++
Sbjct: 89  INDDFAKQLPAKCGVNIGVPFSKTVDCNSIN 119



>AT2G15050.1 | chr2:6518888-6519259 FORWARD LENGTH=124
          Length = 123

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXX--XXVRSLKXXXXXXXXXXXXCNCLKNAARGI 83
           ++CG+VNS + PC  Y                VR L             C C+KNAAR +
Sbjct: 27  LSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNV 86

Query: 84  -KGLNAGNAASIPSKCGVSVPYTISASID 111
             GLNA  AA IP +CG+ +PY+     +
Sbjct: 87  GPGLNADRAAGIPRRCGIKIPYSTQIRFN 115



>AT3G51600.1 | chr3:19138661-19139124 REVERSE LENGTH=119
          Length = 118

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 26  ITCGQVNSAVGPCLTYXXXXXXXXXXXXXXVRSLKXXXXXXXXXXXXCNCLKNAARGIKG 85
           I+CG V  ++G C  Y              V+ L             C C++ AAR +  
Sbjct: 27  ISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS 86

Query: 86  -LNAGNAASIPSKCGVSVPYTISASIDCSRV 115
            LNAG AA +P  C V + Y ISA  +C+ V
Sbjct: 87  RLNAGRAARLPGACRVRISYPISARTNCNTV 117



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.131    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,193,709
Number of extensions: 21567
Number of successful extensions: 69
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 10
Length of query: 116
Length of database: 11,106,569
Length adjustment: 85
Effective length of query: 31
Effective length of database: 8,776,209
Effective search space: 272062479
Effective search space used: 272062479
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 104 (44.7 bits)