BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0111900 Os11g0111900|AK061535
(275 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56230.1 | chr3:20860899-20862135 REVERSE LENGTH=283 201 4e-52
AT1G01640.1 | chr1:231164-231915 REVERSE LENGTH=208 154 5e-38
AT2G40450.1 | chr2:16892024-16892790 REVERSE LENGTH=210 75 3e-14
AT4G08455.1 | chr4:5375891-5376922 FORWARD LENGTH=244 72 4e-13
AT5G48510.1 | chr5:19658080-19658882 FORWARD LENGTH=225 69 2e-12
AT4G04090.1 | chr4:1964980-1965650 FORWARD LENGTH=193 68 4e-12
AT2G05330.1 | chr2:1938618-1939470 REVERSE LENGTH=216 65 3e-11
AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330 63 2e-10
AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327 61 7e-10
AT2G40440.1 | chr2:16889212-16891292 REVERSE LENGTH=195 56 2e-08
AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409 52 4e-07
AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738 50 1e-06
AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416 50 2e-06
>AT3G56230.1 | chr3:20860899-20862135 REVERSE LENGTH=283
Length = 282
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 167/284 (58%), Gaps = 30/284 (10%)
Query: 1 MDCCVCSPMASMYRLPRNAICAACYEGAKAIIAFFNXXXXXXXXXXQGSVKPSRLTKLN- 59
MDC +C+ M S+ R PRN IC +CYEGA+ IA +GS K R K N
Sbjct: 1 MDCSICTTMPSILRPPRNTICGSCYEGARTTIALLKKL--------EGS-KEDRHDKSNH 51
Query: 60 -STIKG----------------LRDAWEEVKQMRCREEETKQRASFLQEGFAAAWKDGIH 102
STI L + +K M+ EEE K+R FL F + +K+ +H
Sbjct: 52 NSTINNGSSISSSPLFSCEPQPLEKVIKWMKNMKETEEEQKKRIVFLS-SFVSGFKEQLH 110
Query: 103 TDIAIRPGT-GPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHLL 161
DI ++PG GPPI AH+A+LA++SE+F++IL D CK +++L EL ++L LL
Sbjct: 111 ADILLKPGDDGPPIPAHRALLASKSEIFKNILDSDG-CKTAPEYAITLQELNSEQLQALL 169
Query: 162 AFLYTGSLATCAEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSS 221
FLYTG+LA+ E++++AL +A DKY + +L+ CE + + ++ +VL L+V++L S
Sbjct: 170 EFLYTGTLASDKLEKNVYALFIAADKYMIHYLQELCEQYMLSSLDISSVLNVLDVSDLGS 229
Query: 222 SAALKERAMGTVVEHAEEVVFSPEYEEFAVRNAALCVQITRTLL 265
S LKE +G VV + ++VVFS +YE F+ +N LCV+ITR L
Sbjct: 230 SKTLKEACVGFVVRNMDDVVFSDKYEPFSQKNQHLCVEITRAFL 273
>AT1G01640.1 | chr1:231164-231915 REVERSE LENGTH=208
Length = 207
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 119/194 (61%), Gaps = 5/194 (2%)
Query: 81 ETKQRASFLQEGFAAAWKDGIHTDIAIRPGT-GPPIQAHKAILATRSEVFRHILAGDDDC 139
E +Q+A+FL G ++K+ +HTD+ ++PG PPI HKA+LA RS+VFR++L D+C
Sbjct: 3 EAEQKAAFLG-GLVVSFKEQMHTDVLVKPGEEAPPIPTHKAVLAARSKVFRNML-DSDEC 60
Query: 140 KAPAGDSLSLPELTHDELSHLLAFLYTGSLATCAEERHLHALLVAGDKYDVPFLRRACEA 199
K +S++LP+L+HDEL LL FLY+G+L A +L +A DKYD+ +L+ C
Sbjct: 61 KTSPEESITLPDLSHDELKSLLEFLYSGNLK--APYNQYRSLYLAADKYDISYLQDVCRN 118
Query: 200 RLAAGVEAGNVLRTLEVAELSSSAALKERAMGTVVEHAEEVVFSPEYEEFAVRNAALCVQ 259
A + + NVL LE+A + LK+ A+ +V+H EEVV +YE F RN L V+
Sbjct: 119 HFIASLSSRNVLDILELASIPCDTILKDAAINHIVKHMEEVVVPMKYETFVQRNPDLSVE 178
Query: 260 ITRTLLANKSLPAK 273
ITR L AK
Sbjct: 179 ITRAYLRETKAKAK 192
>AT2G40450.1 | chr2:16892024-16892790 REVERSE LENGTH=210
Length = 209
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
Query: 92 GFAAAWKDGIHTDIAIRPGTG---PPIQAHKAILATRSEVFRHILAGDD-DCKAPAGDSL 147
GF + D+ ++ G I AHK +L RSEVF+ IL D+ + +++
Sbjct: 13 GFKKLLNEQWQADVRLKAGDSDETTSIFAHKLVLVARSEVFKKILESDEFKASSKQMETV 72
Query: 148 SLPELTHDELSHLLAFLY--TGSLATCAEERHLHALLVAGDKYDVPFLRRACEARLAAGV 205
+L E+ H+EL + F+Y GS+ + + ++H +L A DKY++P LR C L + +
Sbjct: 73 TLSEMKHEELEAFVEFIYRVDGSICSASLKKHARSLFHAADKYEIPHLRDLCRNELISSL 132
Query: 206 EAGNVLRTLEVAELSSSAALKERAMGTVVEHAEEVVFSPEYEEFAVRNAALCVQITR 262
+ N L LE+A++ AL + A T++ + + E++ F + L V I +
Sbjct: 133 NSSNALSILELAQIPFDKALNDPAFTTIITNISTIASGDEFKLFVANHPNLAVDIMK 189
>AT4G08455.1 | chr4:5375891-5376922 FORWARD LENGTH=244
Length = 243
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 112 GPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHLLAFLYTGSLAT 171
PPI AHK++L +RS VF+ +L +++ + ++ + ++++D L + +LYT
Sbjct: 77 SPPIPAHKSVLVSRSPVFKAML--ENEMEESLSGTIKISDVSYDALRTFVYYLYTAE--A 132
Query: 172 CAEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALKERAMG 231
C +E+ LLV +KY V L+ CE L + N L T A ++ + + A+
Sbjct: 133 CLDEQMACDLLVMSEKYQVKHLKSYCERFLVTKLSPDNSLMTYAFAHQHNAKHVLDAALS 192
Query: 232 TVVEHAEEVVFSPEYEEFAVRNAALCVQITRTLLANK 268
+VE+ +++ EY E ++ L V+I L+ +
Sbjct: 193 QIVENMDKLTKREEYMELVEKDPRLIVEIYEAYLSKQ 229
>AT5G48510.1 | chr5:19658080-19658882 FORWARD LENGTH=225
Length = 224
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 92 GFAAAWKDGIHTDIAIRPGT---GPPIQAHKAILATRSEVFRHILAGDD-DCKAPAGDSL 147
G A + D+ ++ G I AHK ILA+RSEVF+++ D+ +++
Sbjct: 13 GLAKVLAEKWQVDVMLKAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKHVETI 72
Query: 148 SLPELTHDELSHLLAFLYT-GSLATCAEERHLHALLVAGDKYDVPFLRRACEARLAAGVE 206
+L E+ H+EL + F+ + GS+ + ++H +L +A DKY++ LR C L + +
Sbjct: 73 TLSEMKHEELEAFVEFICSDGSMLSANVKQHARSLYLAADKYEILHLRDLCRTELISSLS 132
Query: 207 AGNVLRTLEVAELSSSAALKERAMGTVVEHAEEVVFSPEYEEFAVRNAALCVQITRTLLA 266
N L L +A++ L + + + + + S E++ F N L V+I + L
Sbjct: 133 LLNSLDLLVLAQIPFDKVLNDESFSYIKNNISTIASSDEFKLFVAGNPNLAVEIMKVSLI 192
Query: 267 NKSL 270
+L
Sbjct: 193 TLTL 196
>AT4G04090.1 | chr4:1964980-1965650 FORWARD LENGTH=193
Length = 192
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 115 IQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHLLAFLYT-GSLATCA 173
I AHK IL+ RSEVF + D + ++++L E+ H+ L + F Y+ GS+ +
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTYSDGSMLSEK 97
Query: 174 EERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALKERAMGTV 233
++H +L A Y++P L C L A + N LR L++A++ +L A T+
Sbjct: 98 AKQHAMSLYSAAKDYEIPRLWCLCRKELIASLNMSNALRVLQLAQIPYDESLSVAAFTTI 157
Query: 234 VEHAEEVVFSPEYEEFAVRNAALCVQITRTLL 265
++ S + + F V + ++ITR +
Sbjct: 158 KNSKLKLSSSTKVKVFVVNHPNGPLEITRAIF 189
>AT2G05330.1 | chr2:1938618-1939470 REVERSE LENGTH=216
Length = 215
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 120 AILATRSEVFRHILAGDD-DCKAPAGDSLSLPELTHDELSHLLAFLYT-GSLATCAEERH 177
++A+RS V + +L D+ A +++L E+ +EL + FLY+ GS+ + ++H
Sbjct: 33 VMMASRSAVLKKMLESDEFKTSAKQVGTITLLEMKQEELEAFVEFLYSDGSMLSSKVKQH 92
Query: 178 LHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALKERAMGTVVEHA 237
AL A DKY++ LR C + L + + + N L LE+A++ L + A+ +
Sbjct: 93 ARALYRAADKYEILRLRELCRSELISSLNSTNSLNLLELAQIPFDKVLNDAALSYI--KT 150
Query: 238 EEVVFSPEYEEFAV 251
E++F P ++EF +
Sbjct: 151 NELMF-PSFDEFKL 163
>AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 99 DGIHTDIAIRPGTGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELS 158
+ I+TDI I G I AH+A+LA RS VFR + D K +++ ++ D
Sbjct: 160 ESIYTDITINASDGS-IGAHRAVLAARSPVFRSMFLHD--LKEKELSEINVLDMPLDACQ 216
Query: 159 HLLAFLYTGSLATCAEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAE 218
L+++Y G++ H ALL A +KYD+ L+ AC L ++ NVL L+ A
Sbjct: 217 AFLSYIY-GNIQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKNVLERLQNAY 275
Query: 219 LSSSAALKERAMGTVVEHAEEVVFSPEYEEF 249
L LK M +V+ + E+ F
Sbjct: 276 LYQLPELKASCMRYLVKFGKIFEIRDEFNIF 306
>AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327
Length = 326
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 98 KDGIHTDIAIRPGTGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDEL 157
++ I TD+ I G + AHKAIL+ S VF+ + D ++ + +++ +
Sbjct: 156 EESILTDVIIHTADGT-LSAHKAILSASSTVFKSMFHHD--LMEKESSTIHIDDMSRESC 212
Query: 158 SHLLAFLYTGSLATCAEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVA 217
LL++LY G++ +H ALL A +KYD+ L+ ACE L + + NVL L+ A
Sbjct: 213 MALLSYLY-GNITQEEFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNVLERLQEA 271
Query: 218 ELSSSAALKE 227
L LK+
Sbjct: 272 WLYQLEKLKK 281
>AT2G40440.1 | chr2:16889212-16891292 REVERSE LENGTH=195
Length = 194
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 92 GFAAAWKDGIHTDIAIRPGT----GPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSL 147
GFA K+ D+ ++ G G AHK +L+ RSEVF+ +L D+ + +++
Sbjct: 13 GFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETI 72
Query: 148 SLPELTHDELSHLLAFLYT-GSLATCAEERH 177
+L E+ H+EL + F+Y+ GS+ + E++H
Sbjct: 73 TLCEMKHEELEAFIEFIYSDGSMLSAKEKQH 103
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 91 EGFAAAWKDGIHTDIAIRPG-TGPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSL 149
+ FA WK+ + D+ ++ G PI AHK ILA SEV + ++ D + A D ++
Sbjct: 113 DSFAKYWKEKVGVDVLLKAGDQTDPIPAHKIILAASSEVLKQMI----DSTSSASDPITF 168
Query: 150 PELTHDEL 157
E+THDEL
Sbjct: 169 SEMTHDEL 176
>AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409
Length = 408
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 72 VKQMRCREEETKQRA-----SFLQEGFAAAWKDGIHTDIAIRPGTGPPIQAHKAILATRS 126
V +R R E KQ S + +G + DIA + G +AHK ILA RS
Sbjct: 158 VGVVRARLEGPKQYGIVLPLSNMGQGLKDLLDSEVGCDIAFQVGD-ETYKAHKLILAARS 216
Query: 127 EVFRHILAGDDDCKAPAG----DSLSLPELTHDELSHLLAFLYT----------GSLATC 172
VFR G P G D + + ++ +L+F+YT GS +
Sbjct: 217 PVFRAQFFG------PIGNNNVDRIVIDDIEPSIFKAMLSFIYTDVLPNVHEITGSTSAS 270
Query: 173 AEERHLHALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALK 226
+ + LL A D YD+ L+ CE L ++ NV TL +AE LK
Sbjct: 271 SFTNMIQHLLAAADLYDLARLKILCEVLLCEKLDVDNVATTLALAEQHQFLQLK 324
>AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738
Length = 737
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 112 GPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHLLAFLYTGSLAT 171
G AHK L S++FR + G K ++ +P + + ++ F+Y+G +
Sbjct: 576 GKQFYAHKIGLVASSDIFRAMFDGL--YKERNAQNVEIPNIRWEVFELMMKFIYSGRINI 633
Query: 172 CAEERHL-HALLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLEVAELSSSAALKERAM 230
+HL LLVA D+Y + L+R CE +A + N+ E+A+ +++AL+
Sbjct: 634 A---KHLAKDLLVAADQYLLEGLKRQCEYTIAQEICLDNIPEMYELADTFNASALRRACT 690
Query: 231 GTVVEH 236
V+EH
Sbjct: 691 LFVLEH 696
>AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 112 GPPIQAHKAILATRSEVFRHILAGDDDCKAPAGDSLSLPELTHDELSHLLAFLYTGSLAT 171
G QAHK +LA RS+ FR + + A + + +L LL F+Y SL
Sbjct: 213 GEKFQAHKLVLAARSQFFRSMFY---NTLAENNSDVVISDLEPKVFKALLHFMYKDSLPG 269
Query: 172 CAEERHLHA----------------LLVAGDKYDVPFLRRACEARLAAGVEAGNVLRTLE 215
E H+ LL A + Y++ LR CE+ + G+ +V + L
Sbjct: 270 DVEPLTAHSFDLLRPSEIDDTLIVKLLAAAEMYNLSRLRLLCESHICKGISISSVSKILA 329
Query: 216 VAELSSSAALKERAMGTVVEHAEEVVFSPEYEEF 249
+++ +++ LK ++ E+ V+ + YE+
Sbjct: 330 LSDKYNASELKSVSLKFTAENLAAVLQTKAYEDL 363
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,479,281
Number of extensions: 202369
Number of successful extensions: 507
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 497
Number of HSP's successfully gapped: 15
Length of query: 275
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 178
Effective length of database: 8,447,217
Effective search space: 1503604626
Effective search space used: 1503604626
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)