BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0107600 Os11g0107600|Os11g0107600
(257 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56110.1 | chr3:20822228-20822857 REVERSE LENGTH=210 180 7e-46
AT5G01640.1 | chr5:241442-242113 REVERSE LENGTH=224 173 7e-44
AT2G38360.1 | chr2:16069840-16070502 REVERSE LENGTH=221 171 3e-43
AT2G40380.1 | chr2:16864734-16865375 REVERSE LENGTH=214 161 4e-40
AT5G05380.1 | chr5:1592214-1592867 FORWARD LENGTH=218 160 8e-40
AT5G07110.1 | chr5:2206121-2206771 FORWARD LENGTH=217 135 2e-32
AT1G55190.1 | chr1:20588450-20589019 FORWARD LENGTH=190 80 8e-16
AT3G13710.1 | chr3:4492992-4493558 REVERSE LENGTH=189 73 1e-13
AT4G00005.1 | chr4:1180-1536 REVERSE LENGTH=119 71 4e-13
AT1G08770.1 | chr1:2808933-2809562 FORWARD LENGTH=210 71 5e-13
AT5G56230.1 | chr5:22758768-22759328 REVERSE LENGTH=187 70 8e-13
AT3G13720.1 | chr3:4495202-4495768 REVERSE LENGTH=189 66 2e-11
AT1G04260.1 | chr1:1140749-1141297 REVERSE LENGTH=183 61 6e-10
AT1G17700.1 | chr1:6089588-6090130 FORWARD LENGTH=181 61 7e-10
AT1G55640.1 | chr1:20793771-20794334 FORWARD LENGTH=188 59 2e-09
>AT3G56110.1 | chr3:20822228-20822857 REVERSE LENGTH=210
Length = 209
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 128/209 (61%), Gaps = 16/209 (7%)
Query: 4 ASPPLLPTTVLPANATATVSPAPTSVSSADANPAATRAFLARLLDSVKRALSGARPWPEL 63
A+PP LP T N A S P N A R F +RL S++ LS RPW EL
Sbjct: 2 ATPPTLPVT----NQQAVQSQPPI-------NTPAFRTFFSRLSTSIRDGLSQRRPWTEL 50
Query: 64 IDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXX 123
IDRS+++RPESL+DA +R+RKNLAYF+VNY AIV+L LA +
Sbjct: 51 IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 110
Query: 124 XXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALGAAIVCAH 183
RPSD P L FGRTFSDRETL L++++ VVF+TSVGSL+ SAL +G AIVC H
Sbjct: 111 FLYLFRPSDQP-LVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVH 169
Query: 184 GAFRIPEDLFLDEPDQANGAASVNLLSFI 212
GAF +P+DLFLDE + AN LLSF+
Sbjct: 170 GAFVVPDDLFLDEQEPANAG----LLSFL 194
>AT5G01640.1 | chr5:241442-242113 REVERSE LENGTH=224
Length = 223
Score = 173 bits (439), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 126/212 (59%), Gaps = 8/212 (3%)
Query: 1 MAAASPPLLPTTVLPANATATVSPAPTSVSSADANPAATRAFLARLLDSVKRALSGARPW 60
M + +PP+LP + AT T + P + ++ P RAF+ + ++V LS +RPW
Sbjct: 1 MVSTNPPVLPIS---TTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPW 57
Query: 61 PELIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXXXXX 120
EL+DRSA ++P+SLS+AG R RKN +YFRVNY IVAL L +
Sbjct: 58 SELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAA 117
Query: 121 XXXXXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALGAAIV 180
RPSD P L FGR+FS+ ETLGGLI+++ V+F TSVGS++ SAL +G A +
Sbjct: 118 SWLFLYLFRPSDRP-LILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATI 176
Query: 181 CAHGAFRIPEDLFLDEPDQANGAASVNLLSFI 212
C HGAFR P+DLFLDE D A LSFI
Sbjct: 177 CVHGAFRAPDDLFLDEQDHAASG----FLSFI 204
>AT2G38360.1 | chr2:16069840-16070502 REVERSE LENGTH=221
Length = 220
Score = 171 bits (433), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 130/215 (60%), Gaps = 14/215 (6%)
Query: 1 MAAASPPLLPTTVLPANATATVSPAPTSVSSADANPAAT---RAFLARLLDSVKRALSGA 57
MA+++PP+LP + N S AP+SV S P AT R F+ ++ ++VK LS
Sbjct: 1 MASSAPPVLPIS----NPQTVPSAAPSSVESQP--PIATPAFRNFINQITETVKNGLSKR 54
Query: 58 RPWPELIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXX 117
RPW EL DRSALS+PES+SDA R+RKN +YF+VNY + + +
Sbjct: 55 RPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLC 114
Query: 118 XXXXXXXXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALGA 177
RP+D P + FGRTFSDRETLG LI+ S FV+FLT VGS++ SA+ +G
Sbjct: 115 LLASWLFLYLFRPTDQP-IVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGV 173
Query: 178 AIVCAHGAFRIPEDLFLDEPDQANGAASVNLLSFI 212
A++CAHGAFR PEDLFLDE + A+ LSF+
Sbjct: 174 ALICAHGAFRAPEDLFLDEQE----PAATGFLSFL 204
>AT2G40380.1 | chr2:16864734-16865375 REVERSE LENGTH=214
Length = 213
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 15/210 (7%)
Query: 3 AASPPLLPTTVLPANATATVSPAPTSVSSADANPAATRAFLARLLDSVKRALSGARPWPE 62
++SP +LP T AT S P N A R FL+RL S++ +LS RPW E
Sbjct: 2 SSSPAILPVT---NQQAATQSQPPI-------NSHAFRTFLSRLSSSLRESLSQRRPWLE 51
Query: 63 LIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXXXXXXX 122
L+DRS+ +RP+SL+D+ +R+RKNLAYF+VNY+AIV+L LA +
Sbjct: 52 LVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSW 111
Query: 123 XXXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALGAAIVCA 182
R SD P L FGR+FSDRETL GL++ + VVF+TSVGSL+ SAL +G AIVC
Sbjct: 112 MFLYLFRSSDQP-LVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCL 170
Query: 183 HGAFRIPEDLFLDEPDQANGAASVNLLSFI 212
HGAFR+P+DLFLDE + AN LLSFI
Sbjct: 171 HGAFRVPDDLFLDEQEPANAG----LLSFI 196
>AT5G05380.1 | chr5:1592214-1592867 FORWARD LENGTH=218
Length = 217
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 127/209 (60%), Gaps = 14/209 (6%)
Query: 4 ASPPLLPTTVLPANATATVSPAPTSVSSADANPAATRAFLARLLDSVKRALSGARPWPEL 63
A+PP LP + + + P T A R FL+RL S++++LS RPW EL
Sbjct: 3 ANPPTLPISDHSGGGSQSQQPVST---------PAFRTFLSRLSSSIRQSLSQRRPWLEL 53
Query: 64 IDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXX 123
+DRSA+SRPESL+DA +R+R+NL YF+VNY IV+L LA +
Sbjct: 54 VDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWI 113
Query: 124 XXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALGAAIVCAH 183
RPSD P L GRTFSDRETLG L++ + VVFLTSVGSL+ SAL +G IVC H
Sbjct: 114 FLYLFRPSDQP-LVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLH 172
Query: 184 GAFRIPEDLFLDEPDQANGAASVNLLSFI 212
GAFR+PEDLFLD+ + AN LLSF+
Sbjct: 173 GAFRVPEDLFLDDQEPAN----TGLLSFL 197
>AT5G07110.1 | chr5:2206121-2206771 FORWARD LENGTH=217
Length = 216
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 1/150 (0%)
Query: 49 SVKRALSGARPWPELIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXX 108
+V+ A + ARPW EL+DRSA SRP SLS+A +R+RKN +YFR NY +VA+ LAA+
Sbjct: 36 TVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTH 95
Query: 109 XXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSL 168
RP+D PL GRTFSD ETLG L +++ V+F+TSVGSL
Sbjct: 96 PFALFLLASLAASWLFLYFFRPADQ-PLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSL 154
Query: 169 IFSALALGAAIVCAHGAFRIPEDLFLDEPD 198
+ S LA+G V HGAFR PEDLFL+E +
Sbjct: 155 LMSTLAVGIMGVAIHGAFRAPEDLFLEEQE 184
>AT1G55190.1 | chr1:20588450-20589019 FORWARD LENGTH=190
Length = 189
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 30 SSADANPAATRAFLARLLDSVKRALSGARPWPELIDRSALSRPESLSDAGARLRKNLAYF 89
+S+ +PA +++R +K L+ RPW + D +++ P DA +R++ NL YF
Sbjct: 9 TSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYF 68
Query: 90 RVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRETL 149
R NYA V L + R PL FG DR L
Sbjct: 69 RANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDE---PLVVFGYQIDDRTVL 125
Query: 150 GGLIVASAFVVFLTSVGSLIFSALALGAAIVCAHGAFRIPEDLFLDEPDQANGAASVNLL 209
GL V + ++ LT S I +L A +V H A R ++LFLDE A AS L+
Sbjct: 126 IGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEAS-GLM 184
Query: 210 SF 211
S+
Sbjct: 185 SY 186
>AT3G13710.1 | chr3:4492992-4493558 REVERSE LENGTH=189
Length = 188
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 30 SSADANPAATRAFLARLLDSVKRALSGARPWPELIDRSALSRPESLSDAGARLRKNLAYF 89
+S+ A+PA ++R +K L+ R W + D + P +SD +R++ NLAYF
Sbjct: 9 TSSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYF 68
Query: 90 RVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRETL 149
R NYA ++ + + R PL F DR L
Sbjct: 69 RSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRD---VPLKVFRFQIDDRAVL 125
Query: 150 GGLIVASAFVVFLTSVGSLIFSALALGAAIVCAHGAFRIPEDLFLDEP 197
GL V + ++ LT+ I +AL GA +V H R +DLFLDE
Sbjct: 126 IGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173
>AT4G00005.1 | chr4:1180-1536 REVERSE LENGTH=119
Length = 118
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 81 RLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFG 140
R KN +YFRVNY I+AL ++ + RPSD P L G
Sbjct: 3 RFWKNSSYFRVNYVCIIALIISFSLPAHPFSLILLLCLAASWLFLYLFRPSDRP-LILIG 61
Query: 141 RTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALG 176
R+FS+ ETLGGLI+++ V+F TSVGS++ SAL +G
Sbjct: 62 RSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIG 97
>AT1G08770.1 | chr1:2808933-2809562 FORWARD LENGTH=210
Length = 209
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 31 SADANPAATRAFLARLLDSVKRALSGARPWPELIDRSALSRPESLSDAGARLRKNLAYFR 90
S+ +N AR + + ++ RPW E++D SALS P +A A L+ N++YFR
Sbjct: 21 SSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFR 80
Query: 91 VNYA-AIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRETL 149
NYA A++A+ +D+ ++ G+ D+ L
Sbjct: 81 GNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVIS--GKEVDDKIVL 138
Query: 150 GGLIVASAFVVFLTSVGSLIFSALALGAAIVCAHGAFRIPEDLFLDEPDQANGA 203
L + + + T VG + +L +G IV AHGAFR +DLFLDE G
Sbjct: 139 VLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGG 192
>AT5G56230.1 | chr5:22758768-22759328 REVERSE LENGTH=187
Length = 186
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 5/182 (2%)
Query: 21 TVSPAPTSVSSADANPAATRAFLARLLDSVKRALSGARPWPELIDRSALSRPESLSDAGA 80
T SP P + S P T ++R + ++ A+S RPW ELI S PES S
Sbjct: 2 TPSPPPITYISI---PLPTNDVVSRSIHNLTTAISSHRPWSELIFSGDFSLPESFSSLLL 58
Query: 81 RLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFG 140
R + N YF VNY IV+ A D PL +
Sbjct: 59 RSKTNFNYFFVNYTIIVSTCAAFALITASPVALIVVGAIIALWLIFHFFRED--PLILWS 116
Query: 141 RTFSDRETLGGLIVASAFVVFLTSVGSLIFSALALGAAIVCAHGAFRIPEDLFLDEPDQA 200
DR L L++AS + ++ T+ + +++G + H FR ++LFL+E D
Sbjct: 117 FQVGDRTVLLFLVLASVWAIWFTNSAVNLAVGVSVGLLLCIIHAVFRNSDELFLEEDDAI 176
Query: 201 NG 202
NG
Sbjct: 177 NG 178
>AT3G13720.1 | chr3:4495202-4495768 REVERSE LENGTH=189
Length = 188
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 30 SSADANPAATRAFLARLLDSVKRALSGARPWPELIDRSALSRPESLSDAGARLRKNLAYF 89
+S+ A+P L+R +K L+ R W + D ++ P +SDA R++ NLAYF
Sbjct: 9 TSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYF 68
Query: 90 RVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRETL 149
R+NYA +V + + + R P+ F DR L
Sbjct: 69 RMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDE---PIKLFRFQIDDRTVL 125
Query: 150 GGLIVASAFVVFLTSVGSLIFSALALGAAIVCAHGAFRIPEDLFLDE 196
L V + ++ LT+ I AL GA +V H R EDLFLDE
Sbjct: 126 IVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDE 172
>AT1G04260.1 | chr1:1140749-1141297 REVERSE LENGTH=183
Length = 182
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 57 ARPWPELIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXXXXXXX 116
ARPW + +D SA S P S++DA R+ +NL +FR+NY+ I+++ L T
Sbjct: 20 ARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFI 79
Query: 117 XXXXXXXXXXXXRPSDAPPLAAFGRTFSDRE--------TLGGLIVASAFVVFLTSVGSL 168
R PL FG T D ++G L+ ++ LT+VG
Sbjct: 80 AVGLAWFFLYFAREE---PLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVG-- 134
Query: 169 IFSALALGAAIVCAHGAFRIPEDLFLDEPDQANG 202
G ++ H A R +DL D+ + G
Sbjct: 135 ------FGVLVLILHAALRGTDDLVSDDLESPYG 162
>AT1G17700.1 | chr1:6089588-6090130 FORWARD LENGTH=181
Length = 180
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 30 SSADANPAATRAFLARLLDSVKRA-LSGARPWPELIDRSALSRPESLSDAGARLRKNLAY 88
SS D P ++ R ++ KR+ L+ RPW +++D + + P L+ R+R N Y
Sbjct: 10 SSNDLAPKL--EYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVY 67
Query: 89 FRVNYAAIVALSLAATXXXXXXXXXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRET 148
F+ NY +V S+ + R PL F R R
Sbjct: 68 FQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDE---PLTVFDREIDHRIV 124
Query: 149 LGGLIVASAFVVFLTSVGSLIFSALALGAAIVCAHGAFRIPEDLFLDEPD 198
L + V + ++FLT I A+ GA V +H A R EDLF + +
Sbjct: 125 LIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEE 174
>AT1G55640.1 | chr1:20793771-20794334 FORWARD LENGTH=188
Length = 187
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 53 ALSGARPW-PELIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATXXXXXXX 111
++S RPW E + ++ RP S S A +R++ NL +F VNY + A S+
Sbjct: 33 SVSSYRPWWSEFLAFGSIDRPSSFSPAVSRVKLNLHHFAVNYVLLTAASITLFLIGDPMA 92
Query: 112 XXXXXXXXXXXXXXXXXRPSDAPPLAAFGRTFSDRETLGGLIVASAFVV-FLTSVGSLIF 170
R PL +GR SDR + GLI+ S + + F+ S+ LI
Sbjct: 93 LVTVASFVAMWLLLYFYRDH---PLVLYGRHISDRVIVFGLILGSLWALWFINSLQCLIL 149
Query: 171 SALALGAAIVC-AHGAFRIPEDLFLDEPD 198
+ + ++C H R +DLF+ E D
Sbjct: 150 GVVT--SVLLCLVHAIIRNSDDLFVQEKD 176
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,375,684
Number of extensions: 149147
Number of successful extensions: 623
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 609
Number of HSP's successfully gapped: 15
Length of query: 257
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 161
Effective length of database: 8,474,633
Effective search space: 1364415913
Effective search space used: 1364415913
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)