BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0106200 Os11g0106200|AK066650
         (537 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05520.1  | chr5:1632912-1635104 FORWARD LENGTH=525            391   e-109
AT3G11070.1  | chr3:3467801-3469815 FORWARD LENGTH=521            372   e-103

>AT5G05520.1 | chr5:1632912-1635104 FORWARD LENGTH=525
          Length = 524

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/469 (42%), Positives = 285/469 (60%), Gaps = 6/469 (1%)

Query: 69  RLQSVLRRLTAEEVRIRVHDVEIRGCCRTRRAAVEAAVGSDLPXXXXXXXXXXXXXXXXX 128
           + +S+ RR+ A  V +RVHDV ++G  +T+   +EA V   +                  
Sbjct: 59  KAESLFRRMRATPVAVRVHDVIVKGNEKTKDHVIEAEVDV-VRQATTLQELLKASKVANF 117

Query: 129 XXXXXXXFDTVSITLDAAPPGIPGNAAVIVLVDVXXXXXXXXXXLGIFANKGTRSCSVQG 188
                  FD+V ITLD+ PP +PG   V++  DV          +G F     RS S++G
Sbjct: 118 NLQALDIFDSVKITLDSGPPELPGTTNVVI--DVVESKSPITGQIGTFTKAEARSSSLEG 175

Query: 189 SVKLKNLFGYCETWDASGDLGLDQTVELSTGVAIPRIGAIPTPLVARISFLSEDWLK-SS 247
           S+K KN+FGY + WD S   G D + E+  G+ +PR    PTP  +R+   ++DWLK SS
Sbjct: 176 SLKYKNIFGYGDIWDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRVYLSTQDWLKFSS 235

Query: 248 LREHMMGVSVGLLSTMNHNLAYNLSWRTITDRALMSSNSIRGQLGHSLLSSIKYAYKVDQ 307
            +E  +G+S+GL+++  H LAYN++WR + D + M+S SIR QLGH+L+S++KY +K DQ
Sbjct: 236 YKERALGLSLGLIASKYHELAYNIAWRNLIDPSQMASRSIRRQLGHNLVSALKYTFKFDQ 295

Query: 308 RDSRIRPTRGYAYLFSSQVGGLAPESKDARYIRQELDLRXXXXXXXXXXXXXXXXXXXII 367
           R+S +RPTRGY+++ +SQ+GGLAP+S+  R++RQE+DLR                   I 
Sbjct: 296 RNSSLRPTRGYSFISTSQIGGLAPDSRTLRFLRQEIDLRYAVPLGFYRAALNFGIAGGIT 355

Query: 368 HPLARGSTGSISPLSEQFYLGGNRSLMCRLGGPSSLLGFKKRGLGTDLQSSTPENSENVA 427
            P   G     S + E+F+LGGN S +C LGGPS+L GFK RGLG +      ++ E  +
Sbjct: 356 FPWGSGYKSRASCVPERFFLGGNISPVCSLGGPSALWGFKTRGLGPNEPRREVQDDE--S 413

Query: 428 STSPELSARGGDIAVTAFADLSFDIPLKPLRELGIHGHAFVSAGNLAKLTEPDLRKFPLA 487
             + E    GGD+AVTAFADLSFD PLK  R+ GIHGH F  AGN+A+L+E   R F   
Sbjct: 414 GDTYERDFVGGDVAVTAFADLSFDFPLKWFRDRGIHGHVFACAGNMAELSENKYRNFTAP 473

Query: 488 EFLQTFRSSAGFGVVVPTRLFRIEVNYCHILKQFDYDLGKAGIQLNFSS 536
           + L+TFRSS G G+VVPT LFR+E+NYCHILK+ ++D  K+G  + FS+
Sbjct: 474 KLLETFRSSVGAGIVVPTSLFRMELNYCHILKKQEHDRAKSGFFMTFST 522



>AT3G11070.1 | chr3:3467801-3469815 FORWARD LENGTH=521
          Length = 520

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/469 (41%), Positives = 279/469 (59%), Gaps = 13/469 (2%)

Query: 69  RLQSVLRRLTAEEVRIRVHDVEIRGCCRTRRAAVEAAVGSDLPXXXXXXXXXXXXXXXXX 128
           + +S+ RR+ A  V +RVHDV I G  +T+   +EA V + +                  
Sbjct: 62  KAESLFRRMRAAPVPVRVHDVIIGGNEKTKDHIIEAEVDA-VREATTLQELLEASRVANS 120

Query: 129 XXXXXXXFDTVSITLDAAPPGIPGNAAVIVLVDVXXXXXXXXXXLGIFANKGTRSCSVQG 188
                  FD+V+ITLD+ PP +PG   V++  DV          +G +     RS SV+ 
Sbjct: 121 NLRALDIFDSVNITLDSGPPELPGTTNVVI--DVVESKSPLTGQIGAYTRAEARSSSVEA 178

Query: 189 SVKLKNLFGYCETWDASGDLGLDQTVELSTGVAIPRIGAIPTPLVARISFLSEDWLK-SS 247
           S+K KN+FGY + WD S   G D + E+  G+ +PR   + TP  +R+   ++DWLK SS
Sbjct: 179 SLKYKNIFGYGDIWDGSIVYGCDNSAEVGLGMYLPRFRGLSTPFTSRLFLSTQDWLKFSS 238

Query: 248 LREHMMGVSVGLLSTMNHNLAYNLSWRTITDRALMSSNSIRGQLGHSLLSSIKYAYKVDQ 307
            +E  +G+S+GL S+  H L Y ++WR + D +  ++ SIR QLGHSLLS++KY ++ DQ
Sbjct: 239 YKERSLGLSLGLFSSKYHELIYTIAWRNLIDPSQAAAVSIRRQLGHSLLSALKYTFRFDQ 298

Query: 308 RDSRIRPTRGYAYLFSSQVGGLAPESKDARYIRQELDLRXXXXXXXXXXXXXXXXXXXII 367
           R+S +RPT GYA++ +SQ+GGLAP+S+  R+++QE+DLR                   + 
Sbjct: 299 RNSSLRPTNGYAFISTSQIGGLAPDSRSLRFLKQEVDLRYAVPFGFYNAAINFGVSGGVS 358

Query: 368 HPLARGSTGSISPLSEQFYLGGNRSLMCRLGGPSSLLGFKKRGLGTDLQSSTPENSENVA 427
            P   G     S + E+F+LGGN S +C L GPS+L GFK RG+G          SE   
Sbjct: 359 FPWGSGYQNRPSSIPERFFLGGNSSPVCSLSGPSALWGFKTRGVGP---------SEPKR 409

Query: 428 STSPELSARGGDIAVTAFADLSFDIPLKPLRELGIHGHAFVSAGNLAKLTEPDLRKFPLA 487
               E    GGD AVTAFADLSFD+P++ LRE GIHGH F  AGN+AKL+E + R F   
Sbjct: 410 KGDSERDFVGGDAAVTAFADLSFDLPVRWLRERGIHGHVFACAGNMAKLSENEFRNFTAP 469

Query: 488 EFLQTFRSSAGFGVVVPTRLFRIEVNYCHILKQFDYDLGKAGIQLNFSS 536
           +FL+TFR+S G G+V+PT LFR+E+NYCHILK+ ++D  ++G+ L FS+
Sbjct: 470 KFLETFRTSVGAGIVLPTSLFRMELNYCHILKKQEHDQARSGVFLTFSA 518



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,951,744
Number of extensions: 316056
Number of successful extensions: 685
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 676
Number of HSP's successfully gapped: 2
Length of query: 537
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 434
Effective length of database: 8,282,721
Effective search space: 3594700914
Effective search space used: 3594700914
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)