BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0100200 Os11g0100200|J065083C22
(224 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02530.1 | chr5:564332-565776 REVERSE LENGTH=293 149 1e-36
AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246 149 1e-36
AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289 125 2e-29
AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296 119 1e-27
AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663 57 8e-09
AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290 55 3e-08
AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683 54 5e-08
AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144 54 8e-08
AT1G60000.1 | chr1:22093678-22094540 REVERSE LENGTH=259 52 2e-07
AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661 51 4e-07
AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610 50 7e-07
AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262 50 9e-07
AT4G34110.1 | chr4:16336732-16339892 FORWARD LENGTH=630 49 2e-06
AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408 49 3e-06
AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309 48 5e-06
AT1G49760.1 | chr1:18416740-18419753 FORWARD LENGTH=672 47 5e-06
AT3G53460.4 | chr3:19819738-19821423 REVERSE LENGTH=364 47 5e-06
>AT5G02530.1 | chr5:564332-565776 REVERSE LENGTH=293
Length = 292
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 80/86 (93%)
Query: 62 TPVETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDA 121
+ +ETGTKL+ISNLDY VSNEDIKELFSEVGD+KRY I+YD+SGRSKGTAEVVFSR+ DA
Sbjct: 102 SSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDA 161
Query: 122 LAAVKRYNNVQLDGKPMKLELIGINI 147
LAAVKRYNNVQLDGK MK+E++G N+
Sbjct: 162 LAAVKRYNNVQLDGKLMKIEIVGTNL 187
>AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246
Length = 245
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Query: 64 VETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALA 123
+ETGTKL+ISNLDY V NEDIKELF+EVG++KRY++++D+SGRSKGTAEVV+SR+ DALA
Sbjct: 84 IETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALA 143
Query: 124 AVKRYNNVQLDGKPMKLELIGINIEXXXX-XXXXXXXXXXYFDFPPKXXXXXXXXXXXXX 182
AVK+YN+VQLDGKPMK+E++G N++ +
Sbjct: 144 AVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGRPANGNSNGAPWSRGGQGRGGQQRGGGR 203
Query: 183 XXXXXXXXXXXXXXXXXXXXKISAEDLDADLDKYHAEGMQ 222
KISAEDLDADLDKYH+ M+
Sbjct: 204 GGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDME 243
>AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289
Length = 288
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 73/83 (87%)
Query: 64 VETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALA 123
VE GT+LH++NLD V+NEDI+ELFSE+G+V+RY+I+YDK+GR GTAEVV+ R+SDA
Sbjct: 89 VEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAFQ 148
Query: 124 AVKRYNNVQLDGKPMKLELIGIN 146
A+K+YNNV LDG+PM+LE++G N
Sbjct: 149 ALKKYNNVLLDGRPMRLEILGGN 171
>AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296
Length = 295
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 75/87 (86%)
Query: 62 TPVETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDA 121
+ VE GT ++I+NLD V+NEDI+EL++E+G++KRY+I+YDK+GR G+AEVV+ R+SDA
Sbjct: 101 SGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDA 160
Query: 122 LAAVKRYNNVQLDGKPMKLELIGINIE 148
+ A+++YNNV LDG+PMKLE++G N E
Sbjct: 161 IQAMRKYNNVLLDGRPMKLEILGGNTE 187
>AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663
Length = 662
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 67 GTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
G L++ NLD V++E ++ELF+E G + + D SG SKG+ V FS S+A +
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLN 386
Query: 127 RYNNVQLDGKPMKLEL 142
N + GKP+ + L
Sbjct: 387 EMNGKMVGGKPLYVAL 402
>AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290
Length = 289
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 69 KLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDK-SGRSKGTAEVVFSRKSDALAAVKR 127
KL + NL + V + + +LF G+V+ + YDK +GRS+G V S S+ AA ++
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 128 YNNVQLDGKPMKL 140
+N +LDG+P+++
Sbjct: 152 FNGYELDGRPLRV 164
>AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683
Length = 682
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%)
Query: 67 GTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
G+ L++ NLD +V++E +KE+FSE G+V + + G S+G V +S +AL A+K
Sbjct: 341 GSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMK 400
Query: 127 RYNNVQLDGKPMKLEL 142
N + KP+ + L
Sbjct: 401 EMNGKMIGRKPLYVAL 416
>AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144
Length = 143
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 45 PYHAIT--FQAPPTAYTHPTPVETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYD 102
P H+I+ F P T + + +KL I L ++V + +K+ FS G+V I YD
Sbjct: 17 PQHSISSSFHFLPQFCTSSSASPS-SKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYD 75
Query: 103 K-SGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLEL 142
K SGRS+G V F+ + DAL+A + L G+P+++
Sbjct: 76 KGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISF 116
>AT1G60000.1 | chr1:22093678-22094540 REVERSE LENGTH=259
Length = 258
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 49 ITFQAPPTAYTHPTPVETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDK-SGRS 107
+ F P P ET KL + NL + V++E + F E GDV + +D +GRS
Sbjct: 158 VNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRS 217
Query: 108 KGTAEVVFSRKSDALAAVKRYNNVQLDGKPMKLEL 142
+G V +S K++ A++ + +L+G+ +++ L
Sbjct: 218 RGYGFVCYSSKAEMETALESLDGFELEGRAIRVNL 252
>AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661
Length = 660
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 67 GTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
G L++ NLD +V +E +KE+FSE G+V + + G S+G V +S +AL A+
Sbjct: 331 GANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALS 390
Query: 127 RYNNVQLDGKPMKLEL 142
N + KP+ + L
Sbjct: 391 EMNGKMIGRKPLYIAL 406
>AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610
Length = 609
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%)
Query: 68 TKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKR 127
+ +++ N++ AV+ E++++ FS+ G + + D+ G+SKG V FS +A+ AVK
Sbjct: 304 SNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKT 363
Query: 128 YNNVQLDGKPM 138
++ GKP+
Sbjct: 364 FHGQMFHGKPL 374
>AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262
Length = 261
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 68 TKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGR-SKGTAEVVFSRKSDALAAVK 126
+ L++SNLD++++N DI LFS G V R ++ D+ R S+G A V++ + DA A +
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 127 RYNNVQLDGKPMKLELIGIN 146
+ L+G+ + + + N
Sbjct: 117 SMDAKILNGRKLTVSIAADN 136
>AT4G34110.1 | chr4:16336732-16339892 FORWARD LENGTH=630
Length = 629
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 68 TKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKR 127
+ L++ NLD ++S+E +KE+FS G V + D +G SKG+ V F+ +A A+ +
Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQ 377
Query: 128 YNNVQLDGKPM 138
+ ++ KP+
Sbjct: 378 LSGKMIESKPL 388
>AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408
Length = 407
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 67 GTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
G L++ NLD +V N ++ELFSE G + + +G SKG V FS +A A+
Sbjct: 222 GMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAML 281
Query: 127 RYNNVQLDGKPMKLEL 142
+ N + KP+ + L
Sbjct: 282 KMNGKMVGNKPIYVSL 297
>AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309
Length = 308
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 69 KLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRY 128
KL + NL +++S DI ELF + G V I K G+++G A V + +A AA+ ++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKF 155
Query: 129 NNVQLDGK 136
+ Q+ G+
Sbjct: 156 DTFQVSGR 163
>AT1G49760.1 | chr1:18416740-18419753 FORWARD LENGTH=672
Length = 671
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 67 GTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVK 126
G+ L++ NLD +V+++ ++E F+ G + + D SG S+G+ V FS +A A+
Sbjct: 326 GSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAIT 385
Query: 127 RYNNVQLDGKPMKLEL 142
N + KP+ + L
Sbjct: 386 EMNGKMIVTKPLYVAL 401
>AT3G53460.4 | chr3:19819738-19821423 REVERSE LENGTH=364
Length = 363
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 69 KLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDK-SGRSKGTAEVVFSRKSDALAAVKR 127
+L++ NL + V + ++ LF+E G V + YD+ SGRSKG V S + A+
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 128 YNNVQLDGKPMKL 140
N LDG+ +++
Sbjct: 339 LNGADLDGRQIRV 351
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.132 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,965,285
Number of extensions: 96505
Number of successful extensions: 434
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 461
Number of HSP's successfully gapped: 19
Length of query: 224
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 129
Effective length of database: 8,502,049
Effective search space: 1096764321
Effective search space used: 1096764321
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 110 (47.0 bits)