BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0574800 Os10g0574800|AK072719
(407 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17890.1 | chr4:9937121-9939146 FORWARD LENGTH=414 489 e-138
AT5G46750.1 | chr5:18969950-18971817 REVERSE LENGTH=403 473 e-134
AT2G35210.1 | chr2:14836206-14837946 FORWARD LENGTH=396 422 e-118
AT3G53710.1 | chr3:19903730-19905419 REVERSE LENGTH=460 127 1e-29
AT2G37550.1 | chr2:15755544-15757456 REVERSE LENGTH=457 124 7e-29
AT5G54310.1 | chr5:22057262-22061066 REVERSE LENGTH=484 97 2e-20
AT3G17660.1 | chr3:6037717-6039092 FORWARD LENGTH=233 94 2e-19
AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386 92 6e-19
AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338 89 3e-18
AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337 87 2e-17
AT1G60860.1 | chr1:22401244-22407639 REVERSE LENGTH=777 78 7e-15
AT5G13300.1 | chr5:4255923-4262018 REVERSE LENGTH=828 77 2e-14
AT1G10870.1 | chr1:3616905-3623612 REVERSE LENGTH=776 77 2e-14
AT5G61980.1 | chr5:24894472-24899178 FORWARD LENGTH=829 74 1e-13
AT4G32630.2 | chr4:15738315-15741412 FORWARD LENGTH=629 60 2e-09
AT4G13350.1 | chr4:7770170-7773321 REVERSE LENGTH=603 59 5e-09
AT1G08680.4 | chr1:2762820-2768387 FORWARD LENGTH=652 58 7e-09
>AT4G17890.1 | chr4:9937121-9939146 FORWARD LENGTH=414
Length = 413
Score = 489 bits (1259), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/405 (61%), Positives = 313/405 (77%), Gaps = 13/405 (3%)
Query: 13 KNTVFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD 72
KN VFRKL++KS+NK+CFDC+AKNPTWASVTYG+FLCIDCSA HR+LGVH+SFVRSTNLD
Sbjct: 12 KNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGVHISFVRSTNLD 71
Query: 73 SWTPEQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLLAKDVAKNSTED 132
SW+PEQL+ M++GGNNRAQ FFKQHGWTDGGKIEAKYTSRAADLYRQ+LAK+VAK E+
Sbjct: 72 SWSPEQLRTMMFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAADLYRQILAKEVAKAIAEE 131
Query: 133 GNNSWPSSPVAASQPTNQADAIPDLKLAEASKEVANEKTEPEVIRSPRAPT----HSFKK 188
N+ SSPVA SQ ++ + + E +E T SP+A +FKK
Sbjct: 132 TNSGLLSSPVATSQLPEVSNGVSSYSVKEELPLSKHEAT--SATSSPKASNTVVPSTFKK 189
Query: 189 PIVAKKPGNKTGGLGARKLTSKPNESLYEQKPEELAPALPPVTENSTAKSK-----SHTS 243
PI AK+ G KTGGLGARKLT+KP ++LYEQKPEE+AP +P V+ + +SK S S
Sbjct: 190 PIGAKRTG-KTGGLGARKLTTKPKDNLYEQKPEEVAPVIPAVSSTNNGESKSSAGSSFAS 248
Query: 244 RFEYVENTPSAGSNSEENQVIGHVAPPKSSNFFGEFGMDSGYHKKSAPGPSKVQIEESSE 303
RFEY ++ S G + QV+ HVAPPKSS+FF +FGMDS + KKS+ SK Q+EES E
Sbjct: 249 RFEYNDDLQSGGQSVGGTQVLNHVAPPKSSSFFSDFGMDSSFPKKSSSNSSKSQVEESDE 308
Query: 304 ARQKFSNAKSISSSQFFGDQ-ASFEKEAQVSLQKFSGSSAISSADLFGHPTNSSNVDLSA 362
AR+KF+NAKSISS+Q+FGDQ + + E++ +LQKF+GS++ISSAD +GH + SN+D++A
Sbjct: 309 ARKKFTNAKSISSAQYFGDQNKNADLESKATLQKFAGSASISSADFYGHDQDDSNIDITA 368
Query: 363 SDLINRLSFQASQDLSSIKNMAGETGKKLTSLASNIMSDLQDRIL 407
SDLINRLSFQA QDLSS+ N+AGET KKL +LAS I SD+QDR+L
Sbjct: 369 SDLINRLSFQAQQDLSSLVNIAGETKKKLGTLASGIFSDIQDRML 413
>AT5G46750.1 | chr5:18969950-18971817 REVERSE LENGTH=403
Length = 402
Score = 473 bits (1218), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/403 (61%), Positives = 311/403 (77%), Gaps = 17/403 (4%)
Query: 13 KNTVFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD 72
KN VFRKL++KS+NK+CFDC+AKNPTWASV YG+FLCIDCSAVHRSLGVH+SFVRSTNLD
Sbjct: 9 KNVVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHISFVRSTNLD 68
Query: 73 SWTPEQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLLAKDVAKNSTED 132
SW+PEQL+ M++GGNNRAQ FFKQHGW DGGKIEAKYTSRAAD+YRQ LAK+VAK E+
Sbjct: 69 SWSPEQLRTMMFGGNNRAQVFFKQHGWNDGGKIEAKYTSRAADMYRQTLAKEVAKAMAEE 128
Query: 133 GNNSWPS-SPVAASQPTNQADAIPDLKLAEASKEVANEKTEPEVIRSPRAP----THSFK 187
PS S VA SQP ++ + +E+ KE ++ K E V+ SP+A +FK
Sbjct: 129 --TVLPSLSSVATSQPVESSE---NGFTSESPKE-SSLKQEAAVVSSPKASQKVVASTFK 182
Query: 188 KPIVAKKPGNKTGGLGARKLTSKPNESLYEQKPEELAPALPPV--TENSTAKSKSHTSRF 245
KP+V++K G KTGGLGARKLT+K ++LYEQKPEE P +P T +++A S SRF
Sbjct: 183 KPLVSRKSG-KTGGLGARKLTTKSKDNLYEQKPEEPVPVIPAASPTNDTSAAGSSFASRF 241
Query: 246 EYVENTPSAGSNSEENQVIGHVAPPKSSNFFGEFGMDSGYHKKSAPGPSKVQIEESSEAR 305
EY ++ S G + +V+ HVAPPKSSNFF EFGMDS + KKS+ SK Q+EE+ EAR
Sbjct: 242 EYFDDEQSGGQSG--TRVLSHVAPPKSSNFFNEFGMDSAFPKKSSSSSSKAQVEETDEAR 299
Query: 306 QKFSNAKSISSSQFFGDQ-ASFEKEAQVSLQKFSGSSAISSADLFGHPTNSSNVDLSASD 364
+KFSNAKSISS+QFFG+Q + +++ +LQKFSGS+AISS+DLFGH + SN+D++ASD
Sbjct: 300 KKFSNAKSISSAQFFGNQNRDADLDSKATLQKFSGSAAISSSDLFGHGPDDSNIDITASD 359
Query: 365 LINRLSFQASQDLSSIKNMAGETGKKLTSLASNIMSDLQDRIL 407
LINR+SFQA QD+SSI N+A ET KL + AS+I SDLQDR+L
Sbjct: 360 LINRISFQAQQDMSSIANLAEETKNKLGTFASSIFSDLQDRML 402
>AT2G35210.1 | chr2:14836206-14837946 FORWARD LENGTH=396
Length = 395
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/397 (59%), Positives = 293/397 (73%), Gaps = 23/397 (5%)
Query: 13 KNTVFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD 72
K +VF+KL+AKSDNK+CFDCNAKNPTWASVTYG+FLCIDCSAVHRSLGVH+SFVRSTNLD
Sbjct: 9 KISVFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLD 68
Query: 73 SWTPEQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLLAKDVAKNSTED 132
SW+ EQLKMM+YGGNNRAQ FFKQ+GW+DGGK EAKYTSRAADLY+Q+LAK+VAK+ E+
Sbjct: 69 SWSSEQLKMMIYGGNNRAQVFFKQYGWSDGGKTEAKYTSRAADLYKQILAKEVAKSKAEE 128
Query: 133 GNNSWPSSPVAASQPTNQADAIPDLKLAEASKE--VANEKTEPEVI-RSPRAPTHSFKKP 189
+ PS P + P + + +K +EA KE ++ +P+V+ SPR + S KKP
Sbjct: 129 ELDLPPSPPDSTQVP----NGLSSIKTSEALKESNTLKQQEKPDVVPVSPRI-SRSVKKP 183
Query: 190 IVAKKPGNKTGGLGARKLTSKPNESLYEQKPEE--LAPALPPVTENSTAKSKSHTSRFEY 247
+ AKK G KTGGLGARKLT+K + +LY+QKPEE + A PV+ S S S +Y
Sbjct: 184 LGAKKTG-KTGGLGARKLTTKSSGTLYDQKPEESVIIQATSPVSAKSARSSFSSRF--DY 240
Query: 248 VENTPSAGSNSEEN---QVIGHVAPPKSSNFF-GEFGMDSG-YHKKSAPGPSKVQIEESS 302
+N N E+ QV+ HVAPPKSS FF E M+ G + KK SK+QI+E+
Sbjct: 241 ADNV----QNREDYMSPQVVSHVAPPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETD 296
Query: 303 EARQKFSNAKSISSSQFFG-DQASFEKEAQVSLQKFSGSSAISSADLFGHPTNSSNVDLS 361
EAR+KF+NAKSISS+Q+FG D S + EA+ SL+KFSGSSAISSADLFG +DL+
Sbjct: 297 EARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGDGDFPLDLT 356
Query: 362 ASDLINRLSFQASQDLSSIKNMAGETGKKLTSLASNI 398
A DL+NRLS QA QD+SS+KNMA ET KKL S+AS++
Sbjct: 357 AGDLLNRLSLQAQQDISSLKNMAEETKKKLGSVASSL 393
>AT3G53710.1 | chr3:19903730-19905419 REVERSE LENGTH=460
Length = 459
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 71/105 (67%)
Query: 17 FRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTP 76
R L+++ +NK+C DC KNP WASV+YG+F+C++CS HR LGVH+SFVRS +DSW+
Sbjct: 7 LRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSA 66
Query: 77 EQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLL 121
Q+K M GGN R FF Q+G I +KY S AA +YR +
Sbjct: 67 IQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYRDRI 111
>AT2G37550.1 | chr2:15755544-15757456 REVERSE LENGTH=457
Length = 456
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 72/105 (68%)
Query: 17 FRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTP 76
R L+++ +NK+C DC+ KNP WAS++YG+F+C++CS HR LGVH+SFVRS +DSW+
Sbjct: 7 LRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSE 66
Query: 77 EQLKMMVYGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQLL 121
Q+K M GGN R F Q+G + I +KY S AA +YR +
Sbjct: 67 IQIKKMDAGGNERLNNFLAQYGISKETDIISKYNSNAASVYRDRI 111
>AT5G54310.1 | chr5:22057262-22061066 REVERSE LENGTH=484
Length = 483
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 16 VFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWT 75
+ L +N+ C DC K P WASV G+F+C+ CS +HRSLGVH+S VRS LD+W
Sbjct: 18 ILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWL 77
Query: 76 PEQLKMMVYGGNNRAQAFFK 95
PEQ+ + GN++A ++++
Sbjct: 78 PEQVAFIQSMGNDKANSYWE 97
>AT3G17660.1 | chr3:6037717-6039092 FORWARD LENGTH=233
Length = 232
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 16 VFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWT 75
+ L DN+ C DC +K P WASV G+F+C+ CS +HRSLGVH+S VRS LD+W
Sbjct: 18 ILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISQVRSITLDTWL 77
Query: 76 PEQLKMMVYGGNNRAQAFFK 95
P+Q+ M GN + +++
Sbjct: 78 PDQVAFMKSTGNAKGNEYWE 97
>AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386
Length = 385
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 17 FRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTP 76
KL + NK C DC + P W S++ GVF+CI CS VHRSLGVH+S V S LD WT
Sbjct: 50 LEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTD 109
Query: 77 EQLKMMV-YGGNNRAQAFFK 95
+Q+ M+V YGGN F+
Sbjct: 110 DQVDMLVGYGGNTAVNERFE 129
>AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338
Length = 337
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 17 FRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTP 76
R L +SDN++C DC A +P WAS GVF+C+ C VHRSLG H+S V S LD W+
Sbjct: 18 IRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDEWSD 77
Query: 77 EQLKMMV-YGGNNRAQAFFK 95
E++ M+ GGN A + ++
Sbjct: 78 EEVDSMIEIGGNASANSIYE 97
>AT4G05330.1 | chr4:2720772-2722679 REVERSE LENGTH=337
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 17 FRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTP 76
R L + DN++C DC A +P WAS GVF+C+ C VHRSLG H+S V S LD W+
Sbjct: 18 IRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSD 77
Query: 77 EQLKMMV-YGGNNRAQAFFK 95
E++ M+ GGN A + ++
Sbjct: 78 EEVDSMIEIGGNASANSIYE 97
>AT1G60860.1 | chr1:22401244-22407639 REVERSE LENGTH=777
Length = 776
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 14 NTVFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD- 72
+ V LR N C +CNA +P WAS+ GV +CI+CS VHR+LGVH+S VRS LD
Sbjct: 467 DDVLTILREIPGNNTCAECNAPDPDWASLNLGVLMCIECSGVHRNLGVHISKVRSLTLDV 526
Query: 73 -SWTPEQLKMMVYGGNNRAQAFFKQ 96
W P L + GN + +++
Sbjct: 527 KVWEPTILDLFRNLGNGYCNSVWEE 551
>AT5G13300.1 | chr5:4255923-4262018 REVERSE LENGTH=828
Length = 827
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 20 LRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD--SWTPE 77
LR N C DC A P WAS+ GV +CI+CS VHR+LGVH+S VRS LD W P
Sbjct: 507 LRKVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPS 566
Query: 78 QLKMMVYGGNNRAQAFFKQ 96
+ + GN A +++
Sbjct: 567 VISLFQALGNTFANTVWEE 585
>AT1G10870.1 | chr1:3616905-3623612 REVERSE LENGTH=776
Length = 775
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 20 LRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD--SWTPE 77
LR N C +CNA P WAS+ GV LCI CS VHR+LGVH+S VRS +LD W P
Sbjct: 473 LRGLPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPT 532
Query: 78 QLKMMVYGGN 87
L + GN
Sbjct: 533 ILDLFRNLGN 542
>AT5G61980.1 | chr5:24894472-24899178 FORWARD LENGTH=829
Length = 828
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 26 NKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLD--SWTPEQLKMMV 83
N+ C DC A P WAS+ GV +CI+CS +HR+LGVH+S VRS LD W P L +
Sbjct: 510 NERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISKVRSLTLDVKVWEPSVLTLFQ 569
Query: 84 YGGN 87
GN
Sbjct: 570 SLGN 573
>AT4G32630.2 | chr4:15738315-15741412 FORWARD LENGTH=629
Length = 628
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 17 FRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTP 76
R L +N+ C +CN+ P + T+ F+C++CS +HR V+S ++ +T
Sbjct: 11 IRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREF---THRVKSVSMAKFTA 67
Query: 77 EQLKMMVYGGNNRA-QAFFKQ 96
+++ + GGN RA Q +FK+
Sbjct: 68 DEVSALRAGGNERARQIYFKE 88
>AT4G13350.1 | chr4:7770170-7773321 REVERSE LENGTH=603
Length = 602
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 16 VFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWT 75
+ R L +NK C +CN+ P + T+ F+C +CS +HR V+S ++ +T
Sbjct: 14 IIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREF---THRVKSISMAKFT 70
Query: 76 PEQLKMMVYGGNNRAQAFF------KQHGWTDGGKIEAKYTSRAADLYRQLLAKDVAKNS 129
+++ + GGN A+ + ++ DG +E R D R + N
Sbjct: 71 SQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVE-----RLRDFIRHVYVNKRYTNE 125
Query: 130 TED 132
D
Sbjct: 126 KND 128
>AT1G08680.4 | chr1:2762820-2768387 FORWARD LENGTH=652
Length = 651
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 16 VFRKLRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWT 75
+ R L N+ C +CN+ P + T+ F+C+ CS +HR V+S ++ +T
Sbjct: 14 IIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREF---THRVKSVSMSKFT 70
Query: 76 PEQLKMMVYGGNNRAQAFF 94
++++++ GGN RA+ +
Sbjct: 71 SKEVEVLQNGGNQRAREIY 89
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.309 0.124 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,611,646
Number of extensions: 368556
Number of successful extensions: 1137
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 1118
Number of HSP's successfully gapped: 17
Length of query: 407
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 306
Effective length of database: 8,337,553
Effective search space: 2551291218
Effective search space used: 2551291218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 113 (48.1 bits)