BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0563500 Os10g0563500|AK101930
(799 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16970.1 | chr4:9551516-9555766 REVERSE LENGTH=890 291 8e-79
AT4G19110.2 | chr4:10454770-10457468 REVERSE LENGTH=465 64 2e-10
AT5G45430.1 | chr5:18409200-18411711 FORWARD LENGTH=500 57 3e-08
AT5G67380.1 | chr5:26881156-26883383 REVERSE LENGTH=410 57 5e-08
AT2G23070.1 | chr2:9824162-9826871 REVERSE LENGTH=433 55 1e-07
AT3G50000.1 | chr3:18534487-18536743 FORWARD LENGTH=404 55 1e-07
AT3G17850.1 | chr3:6109854-6116245 REVERSE LENGTH=1297 54 2e-07
AT2G23080.1 | chr2:9827228-9829343 FORWARD LENGTH=334 54 2e-07
>AT4G16970.1 | chr4:9551516-9555766 REVERSE LENGTH=890
Length = 889
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 215/347 (61%), Gaps = 30/347 (8%)
Query: 465 KEDKDQVAAKVQKGHTEPKPLPNFKNFXXXXXXXXXXXXTVYRARRKSDGRLFAIKCPHA 524
K++ + V K QK + +P+F ++ VY+A RK+DG FAIKCPH
Sbjct: 375 KQNFNTVRLKDQKDQAKHNTIPDFDSYTIVEEEGSGGYGIVYKATRKTDGTEFAIKCPHV 434
Query: 525 NAHSHHVYNEQKMLERFGGKNFVIKYECSLRSGDLECFVLEHVEHDRPENLRKEIGLFDL 584
A ++V NE +MLERFGGKN +IK+E L++GD +C +LEH+EHDRP++L++EI ++ L
Sbjct: 435 GAQKYYVNNEIRMLERFGGKNCIIKHEGCLKNGDSDCIILEHLEHDRPDSLKREIDVYQL 494
Query: 585 RWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAKGYLIDFNLANDLHQKFFRNSKSE 644
+WYG+C+FKAL+SLHKQG+VHRDVKPGNFLFSRK KGYLIDFNLA DLHQK+ R KS+
Sbjct: 495 QWYGYCMFKALSSLHKQGVVHRDVKPGNFLFSRKTNKGYLIDFNLAMDLHQKYRRADKSK 554
Query: 645 -------------TISRGKDTISQPALKSTPVVQAKEPVADSKQLLGSKRKRSNRSPVGS 691
T+ + D +++ K + A + K+ G R R++ +
Sbjct: 555 AASGLPTASKKHHTLVKSLDAVNRGTNKPSQKTLAPNSI---KKAAGKTRARNDMT---- 607
Query: 692 APKNDNKSRHGIQAADVSGVTSAKDPTSTKT--SLDRLKQPMPYKGRKELMNFLHDAMQS 749
R Q A+ SG+TSAKD TST+ S ++ ++P+P GRK L++FL + M
Sbjct: 608 -----RWERLNSQGAEGSGLTSAKDVTSTRNNPSGEKRREPLPCHGRKALLDFLQETMSV 662
Query: 750 PDKN---TSTAPVSQRKRVAAPLGNVDQKLFILTPMPLCSGGSAIAG 793
P N +S AP S RKRVAA G +++L LTPMPLCS G AG
Sbjct: 663 PIPNHEVSSKAPTSMRKRVAALPGKAEKELLYLTPMPLCSNGRPEAG 709
>AT4G19110.2 | chr4:10454770-10457468 REVERSE LENGTH=465
Length = 464
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 504 TVYRARRKSDGRLFAIKCPHANAHSHHV---YNEQKMLERFGGKNFVIKYECSLRSGDLE 560
+V+RA K G + AIK +S E K L R N ++K + +R D+
Sbjct: 17 SVWRAINKQTGEVVAIKKMKKKYYSWDECINLREVKSLRRMNHPN-IVKLKEVIRENDIL 75
Query: 561 CFVLEHVEHDRPENLRKEIGLF---DLRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSR 617
FV E++E + + ++ LF D++ + F +F+ L+ +H++G HRD+KP N L S+
Sbjct: 76 YFVFEYMECNLYQLMKDRQKLFAEADIKNWCFQVFQGLSYMHQRGYFHRDLKPENLLVSK 135
Query: 618 KLAKGYLIDFNLANDLH 634
+ K + DF LA +++
Sbjct: 136 DIIK--IADFGLAREVN 150
>AT5G45430.1 | chr5:18409200-18411711 FORWARD LENGTH=500
Length = 499
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 505 VYRARRKSDGRLFAIKCPHANAHSHHV---YNEQKMLERFGGKNFVIKYECSLRSGDLEC 561
V+RA K + AIK S E K L R N ++K + +R D+
Sbjct: 18 VWRAVNKQTNEVVAIKRMKKKYFSWEECVNLREVKSLSRMNHPN-IVKLKEVIRENDILY 76
Query: 562 FVLEHVE-------HDRPENLRKEIGLFDLRWYGFCLFKALASLHKQGIVHRDVKPGNFL 614
FV E++E DRP++ + D+R + F +F+ L+ +H++G HRD+KP N L
Sbjct: 77 FVFEYMECNLYQLMKDRPKHFAES----DIRNWCFQVFQGLSYMHQRGYFHRDLKPENLL 132
Query: 615 FSRKLAKGYLIDFNLANDL 633
S+ + K + D LA ++
Sbjct: 133 VSKDVIK--IADLGLAREI 149
>AT5G67380.1 | chr5:26881156-26883383 REVERSE LENGTH=410
Length = 409
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 562 FVLEHVEHDRPENLRKEIGLFDLRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAK 621
+ E+V + L + +D+R+Y + L KAL H QGI+HRDVKP N + +L K
Sbjct: 182 LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRK 241
Query: 622 GYLIDFNLANDLH 634
LID+ LA H
Sbjct: 242 LRLIDWGLAEFYH 254
>AT2G23070.1 | chr2:9824162-9826871 REVERSE LENGTH=433
Length = 432
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 562 FVLEHVEHDRPENLRKEIGLFDLRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAK 621
+ EHV + + L + +D+R+Y F L KAL H +GI+HRDVKP N + + K
Sbjct: 204 LIFEHVNNKDFKVLYPTLSDYDVRYYIFELLKALDFCHSRGIMHRDVKPHNVMIDHEQRK 263
Query: 622 GYLIDFNLANDLH 634
LID+ LA H
Sbjct: 264 LRLIDWGLAEFYH 276
>AT3G50000.1 | chr3:18534487-18536743 FORWARD LENGTH=404
Length = 403
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 562 FVLEHVEHDRPENLRKEIGLFDLRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAK 621
+ E+V + L + +D+R+Y + L KAL H QGI+HRDVKP N + +L K
Sbjct: 176 LIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRK 235
Query: 622 GYLIDFNLANDLH 634
LID+ LA H
Sbjct: 236 LRLIDWGLAEFYH 248
>AT3G17850.1 | chr3:6109854-6116245 REVERSE LENGTH=1297
Length = 1296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 468 KDQVAAKVQKGHTEPKPLPNFKNFXXXXXXXXXXXXTVYRARRKSDGRLFAIKCPHANAH 527
+D V ++ P+ + +F V+ A++++ G LFAIK
Sbjct: 859 EDDVVRSLRTSPVHPRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADM 918
Query: 528 SHHVYNEQKMLER---FGGKN-FVIKYECSLRSGDLECFVLEHVEHDRPENLRKEIGLFD 583
E + ER +N FV+++ S D V+E++ +L + +G +
Sbjct: 919 IRKNAVESILAERDILINVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLE 978
Query: 584 ---LRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAKGYLIDFNLANDLHQKF--F 638
+R Y + AL LH +G+VHRD+KP N L +A+D H K F
Sbjct: 979 EDIVRVYIAEVVLALEYLHSEGVVHRDLKPDNLL--------------IAHDGHIKLTDF 1024
Query: 639 RNSKSETISRGKDTISQPALKSTPVVQAKEP-VADSKQLLGSKRKRS 684
SK I+ D ++ PA+ T ++ +E +A S++ L ++KRS
Sbjct: 1025 GLSKVGLIN-STDDLAGPAVSGTSLLDEEESRLAASEEQLERRKKRS 1070
>AT2G23080.1 | chr2:9827228-9829343 FORWARD LENGTH=334
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 582 FDLRWYGFCLFKALASLHKQGIVHRDVKPGNFLFSRKLAKGYLIDFNLANDLH 634
+D+R+Y + L KAL H QGI+HRDVKP N + +L K LID+ LA H
Sbjct: 126 YDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHQLRKLRLIDWGLAEFYH 178
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,293,370
Number of extensions: 754507
Number of successful extensions: 3175
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 3195
Number of HSP's successfully gapped: 10
Length of query: 799
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 692
Effective length of database: 8,173,057
Effective search space: 5655755444
Effective search space used: 5655755444
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)