BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0557600 Os10g0557600|J075191F19
(260 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265 152 2e-37
AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241 149 2e-36
AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309 143 7e-35
AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332 141 3e-34
AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304 122 2e-28
AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270 120 5e-28
AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275 119 2e-27
AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309 118 4e-27
AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340 117 7e-27
AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323 116 1e-26
AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313 115 3e-26
AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239 114 4e-26
AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205 101 3e-22
AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292 101 3e-22
AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212 58 6e-09
AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209 58 6e-09
AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296 57 8e-09
AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353 56 2e-08
AT3G20750.1 | chr3:7255016-7256140 FORWARD LENGTH=209 55 3e-08
AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399 55 4e-08
AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121 55 4e-08
AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140 54 6e-08
AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150 53 2e-07
AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198 50 9e-07
AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191 50 1e-06
>AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265
Length = 264
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 75/80 (93%)
Query: 140 AEVGMEAGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVL 199
+E G+RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL+PEYRPA+SPTFVL
Sbjct: 170 SETTEGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVL 229
Query: 200 TQHSNSHRKVMELRRQKELL 219
TQHSNSHRKVMELRRQKE++
Sbjct: 230 TQHSNSHRKVMELRRQKEVM 249
>AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241
Length = 240
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/78 (88%), Positives = 72/78 (92%)
Query: 140 AEVGMEAGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVL 199
AE G RRCTHCASEKTPQWRTGPLGPKTLCNACGVR+KSGRL+PEYRPA+SPTFVL
Sbjct: 149 AESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVL 208
Query: 200 TQHSNSHRKVMELRRQKE 217
TQHSNSHRKVMELRRQKE
Sbjct: 209 TQHSNSHRKVMELRRQKE 226
>AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309
Length = 308
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 70/76 (92%)
Query: 143 GMEAGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQH 202
G G RRC HCA+EKTPQWRTGP+GPKTLCNACGVR+KSGRL+PEYRPA+SPTFV+ +H
Sbjct: 191 GESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARH 250
Query: 203 SNSHRKVMELRRQKEL 218
SNSHRKVMELRRQKE+
Sbjct: 251 SNSHRKVMELRRQKEM 266
>AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332
Length = 331
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 61/70 (87%), Positives = 68/70 (97%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRK 208
RRC HCA++KTPQWRTGP+GPKTLCNACGVR+KSGRL+PEYRPAASPTFVL +HSNSHRK
Sbjct: 219 RRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRK 278
Query: 209 VMELRRQKEL 218
VMELRRQKE+
Sbjct: 279 VMELRRQKEM 288
>AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304
Length = 303
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 62/70 (88%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHR 207
VR+CTHC + KTPQWR GP GPKTLCNACGVRF+SGRL+PEYRPA+SPTF+ HSNSHR
Sbjct: 219 VRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHR 278
Query: 208 KVMELRRQKE 217
K++E+RR+ +
Sbjct: 279 KIIEMRRKDD 288
>AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270
Length = 269
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 59/70 (84%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRK 208
RRC+HC + TPQWRTGP+GPKTLCNACGVRFKSGRL PEYRPA SPTF HSN HRK
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239
Query: 209 VMELRRQKEL 218
V+ELR+ KEL
Sbjct: 240 VLELRKSKEL 249
>AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275
Length = 274
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 58/67 (86%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRK 208
R+C HC +EKTPQWR GP GPKTLCNACGVR+KSGRL+PEYRPA SPTF HSNSHRK
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253
Query: 209 VMELRRQ 215
++E+R+Q
Sbjct: 254 IVEMRKQ 260
>AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309
Length = 308
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 61/70 (87%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHR 207
VR CTHC + TPQWR GP GPKTLCNACGVRFKSGRL+PEYRPA+SPTF+ + HSNSHR
Sbjct: 217 VRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHR 276
Query: 208 KVMELRRQKE 217
K++E+R++ +
Sbjct: 277 KIIEMRKKDD 286
>AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340
Length = 339
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 59/69 (85%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRK 208
R+C+HC +KTPQWR GP+G KTLCNACGVR+KSGRL+PEYRPA SPTF HSN HRK
Sbjct: 249 RKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRK 308
Query: 209 VMELRRQKE 217
V+E+RR+KE
Sbjct: 309 VIEMRRKKE 317
>AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323
Length = 322
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 57/69 (82%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHR 207
+R+C HC KTPQWR GP+GPKTLCNACGVR+KSGRL PEYRPAASPTF HSNSH+
Sbjct: 228 LRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHK 287
Query: 208 KVMELRRQK 216
KV E+R ++
Sbjct: 288 KVAEMRNKR 296
>AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313
Length = 312
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 57/69 (82%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRK 208
R+C HC +KTPQWR GPLG KTLCNACGVR+KSGRL+PEYRPA SPTF HSN H K
Sbjct: 221 RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSK 280
Query: 209 VMELRRQKE 217
V+E+RR+KE
Sbjct: 281 VIEMRRKKE 289
>AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239
Length = 238
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 142 VGMEAGVRRC-THCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLT 200
V + +RRC +HC +KTPQWR GPLG KTLCNACGVRFKSGRL+PEYRPA SPTF
Sbjct: 156 VVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFTNE 215
Query: 201 QHSNSHRKVMELRRQK 216
HSNSHRKV+ELR K
Sbjct: 216 IHSNSHRKVLELRLMK 231
>AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205
Length = 204
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 151 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVM 210
C+HC + KTP WR GP G TLCNACG+R+++GRL+PEYRPA+SP F HSN HRKVM
Sbjct: 117 CSHCGTRKTPLWREGPRGAGTLCNACGMRYRTGRLLPEYRPASSPDFKPNVHSNFHRKVM 176
Query: 211 ELRRQKE 217
E+RR+++
Sbjct: 177 EIRRERK 183
>AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292
Length = 291
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 151 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVM 210
CTHC + TPQWR GP G KTLCNACG+RF+SGRL+ EYRPAASPTF+ T HSN H+K++
Sbjct: 193 CTHCETTTTPQWREGPNGRKTLCNACGIRFRSGRLVLEYRPAASPTFIPTVHSNLHKKII 252
Query: 211 ELR 213
+R
Sbjct: 253 YMR 255
>AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212
Length = 211
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFK 181
RRC +C + TP WR GP GPK+LCNACG+RFK
Sbjct: 74 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 107
>AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209
Length = 208
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFK 181
RRC C + TP WR GP GPK+LCNACG+RFK
Sbjct: 92 RRCASCDTTSTPLWRNGPKGPKSLCNACGIRFK 124
>AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296
Length = 295
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFK 181
RRC +C + TP WR GP GPK+LCNACG+RFK
Sbjct: 151 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 184
>AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353
Length = 352
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVR 179
+R C+ C + KTP WR+GP GPK+LCNACG+R
Sbjct: 198 IRICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229
>AT3G20750.1 | chr3:7255016-7256140 FORWARD LENGTH=209
Length = 208
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 30/37 (81%), Gaps = 2/37 (5%)
Query: 147 GVRRCTH--CASEKTPQWRTGPLGPKTLCNACGVRFK 181
G+++CT+ C + TP WR GPLGPK+LCNACG++F+
Sbjct: 155 GMKKCTNMNCNALNTPMWRRGPLGPKSLCNACGIKFR 191
>AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399
Length = 398
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVR 179
+R C+ C + KTP WR+GP GPK+LCNACG+R
Sbjct: 229 IRVCSDCNTTKTPLWRSGPRGPKSLCNACGIR 260
>AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121
Length = 120
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 148 VRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGR--------LMPEYRPAASPTFVL 199
+R C+ C + KTP WR GP GPK+LCNACG+R + R ++ ++ AS L
Sbjct: 25 IRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGIHIIRSHKSLASKKINL 84
Query: 200 TQHSNSHRKVMELRRQKE 217
S+ V + R KE
Sbjct: 85 LSSSHGGVAVKKRRSLKE 102
>AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140
Length = 139
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 151 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGR 184
C C + KTP WR GP+GPK+LCNACG+R + R
Sbjct: 38 CADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR 71
>AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150
Length = 149
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGR 184
+ C C + KTP WR GP GPK+LCNACG+R + R
Sbjct: 41 KSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKR 76
>AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198
Length = 197
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 151 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGR 184
C C + +TP WR GP GPK+LCNACG++ + R
Sbjct: 39 CVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKR 72
>AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191
Length = 190
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGR 184
R C C + +TP WR GP GPK+LCNACG++ + R
Sbjct: 42 RTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKR 77
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,187,001
Number of extensions: 92662
Number of successful extensions: 226
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 226
Number of HSP's successfully gapped: 25
Length of query: 260
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 163
Effective length of database: 8,447,217
Effective search space: 1376896371
Effective search space used: 1376896371
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)