BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0552700 Os10g0552700|AK063090
(124 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22460.1 | chr4:11839160-11839561 REVERSE LENGTH=134 81 1e-16
AT4G12510.1 | chr4:7417414-7417803 REVERSE LENGTH=130 80 3e-16
AT4G12520.1 | chr4:7421279-7421668 REVERSE LENGTH=130 80 3e-16
AT2G45180.1 | chr2:18626377-18626781 FORWARD LENGTH=135 80 4e-16
AT4G12490.1 | chr4:7409830-7410378 REVERSE LENGTH=183 78 1e-15
AT4G12500.1 | chr4:7414369-7414902 REVERSE LENGTH=178 76 4e-15
AT1G62510.1 | chr1:23136632-23137081 REVERSE LENGTH=150 75 8e-15
AT5G46900.1 | chr5:19039954-19040337 REVERSE LENGTH=128 75 1e-14
AT1G12100.1 | chr1:4095246-4095845 FORWARD LENGTH=133 73 3e-14
AT5G46890.1 | chr5:19036437-19036820 REVERSE LENGTH=128 72 5e-14
AT4G12480.1 | chr4:7406371-7406877 REVERSE LENGTH=169 71 2e-13
AT4G12530.1 | chr4:7428141-7428494 REVERSE LENGTH=118 70 2e-13
AT1G12090.1 | chr1:4090176-4090589 REVERSE LENGTH=138 69 5e-13
AT4G00165.1 | chr4:69433-69819 REVERSE LENGTH=129 68 1e-12
AT4G12470.1 | chr4:7401371-7401856 REVERSE LENGTH=162 67 2e-12
AT4G12550.1 | chr4:7439176-7439511 FORWARD LENGTH=112 65 1e-11
AT4G12545.1 | chr4:7434260-7434586 FORWARD LENGTH=109 60 3e-10
AT3G22120.1 | chr3:7795283-7796287 REVERSE LENGTH=335 52 6e-08
>AT4G22460.1 | chr4:11839160-11839561 REVERSE LENGTH=134
Length = 133
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 24 GTDCPP--------APRPRPSTGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXX 75
T+CPP P P P+TG+CP+DALK+ VC N L L+ P PCCS
Sbjct: 26 STNCPPPPGKHNKQKPSPTPTTGTCPKDALKVGVCVNALNLLNGLTPGTPPVTPCCSLIE 85
Query: 76 XXXXXXXXXXXCTAVKANVLGIKLDLPVDLSLILNNCGKICPSDFK 121
CTA+KA+VLGI L LP++LSL+LN C + DF+
Sbjct: 86 GLVDLEAAICLCTALKASVLGINLTLPINLSLLLNICNREASRDFQ 131
>AT4G12510.1 | chr4:7417414-7417803 REVERSE LENGTH=130
Length = 129
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 36 STGSCPRDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANV 94
STGSCP+D LKL VCANVL L+K ++G P +PCCS CTA+KA V
Sbjct: 42 STGSCPKDTLKLGVCANVLKDLLKIQLGT-PPVKPCCSLLNGLVDLEAAACLCTALKAKV 100
Query: 95 LGIKLDLPVDLSLILNNCGKICPSDFKC 122
LGI L++PV LSL+LN CGK PS F C
Sbjct: 101 LGINLNVPVSLSLLLNVCGKKVPSGFVC 128
>AT4G12520.1 | chr4:7421279-7421668 REVERSE LENGTH=130
Length = 129
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 36 STGSCPRDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANV 94
STGSCP+D LKL VCANVL L+K ++G P +PCCS CTA+KA V
Sbjct: 42 STGSCPKDTLKLGVCANVLKDLLKIQLGT-PPVKPCCSLLNGLVDLEAAACLCTALKAKV 100
Query: 95 LGIKLDLPVDLSLILNNCGKICPSDFKC 122
LGI L++PV LSL+LN CGK PS F C
Sbjct: 101 LGINLNVPVSLSLLLNVCGKKVPSGFVC 128
>AT2G45180.1 | chr2:18626377-18626781 FORWARD LENGTH=135
Length = 134
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 39 SCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANVLGIK 98
+CP D LKL VCA++LGLV VG+ P PCC+ CTA+KANVLGI
Sbjct: 51 TCPTDTLKLGVCADLLGLVNVVVGS-PPKTPCCTLLQGLANLEAAVCLCTALKANVLGIN 109
Query: 99 LDLPVDLSLILNNCGKICPSDFKC 122
L++P+DL+L+LN CGK P F+C
Sbjct: 110 LNVPIDLTLLLNYCGKKVPHGFQC 133
>AT4G12490.1 | chr4:7409830-7410378 REVERSE LENGTH=183
Length = 182
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 31 PRPRPSTGSCPRDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTA 89
PR S+G+CP DAL+L VCANVL GL+ ++G +P +PCCS CTA
Sbjct: 90 PRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSP-QPCCSLIQGLVDLDAAVCLCTA 148
Query: 90 VKANVLGIKLDLPVDLSLILNNCGKICPSDFKC 122
++ANVLGI L++P+ LS++LN C + PS+F+C
Sbjct: 149 LRANVLGINLNVPISLSVLLNVCNRRLPSNFQC 181
>AT4G12500.1 | chr4:7414369-7414902 REVERSE LENGTH=178
Length = 177
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 36 STGSCPRDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANV 94
S+G+CP DAL+L VCANVL GL+ ++G + +PCCS CTA++ANV
Sbjct: 90 SSGNCPIDALRLGVCANVLSGLLNVQLGQPSA-QPCCSLIQGLVDLDAAICLCTALRANV 148
Query: 95 LGIKLDLPVDLSLILNNCGKICPSDFKC 122
LGI L++P+ LS++LN C + PSDF+C
Sbjct: 149 LGINLNVPISLSVLLNVCNRRLPSDFQC 176
>AT1G62510.1 | chr1:23136632-23137081 REVERSE LENGTH=150
Length = 149
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 36 STGSCPRDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANV 94
+ CPRDALKL VCANVL GL+ +G P EPCC+ CTA+KAN+
Sbjct: 63 AIAKCPRDALKLGVCANVLNGLLNVTLGK-PPVEPCCTLIQGLADLEAAACLCTALKANI 121
Query: 95 LGIKLDLPVDLSLILNNCGKICPSDFKC 122
LGI L++P+ LSL+LN C K P F+C
Sbjct: 122 LGINLNIPLSLSLLLNVCSKKVPRGFQC 149
>AT5G46900.1 | chr5:19039954-19040337 REVERSE LENGTH=128
Length = 127
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 7/92 (7%)
Query: 31 PRPRPSTGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAV 90
P P+P+ +DALKL+VCANVL LVK ++ P CC+ CTA+
Sbjct: 42 PSPKPTC----KDALKLKVCANVLDLVKV---SLPPTSNCCALIKGLVDLEAAVCLCTAL 94
Query: 91 KANVLGIKLDLPVDLSLILNNCGKICPSDFKC 122
KANVLGI L++P+ L+++LN+CGK PS FKC
Sbjct: 95 KANVLGINLNVPISLNVVLNHCGKKVPSGFKC 126
>AT1G12100.1 | chr1:4095246-4095845 FORWARD LENGTH=133
Length = 132
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 23 CGTDCPPAPRPR------PSTGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXX 76
C T PP P P P+T SC RDA+KL VCA +L + V CCS
Sbjct: 26 CNTCFPPTPIPNLNPISNPTTPSCSRDAIKLGVCAKILDVAVGTVIGNPSDTLCCSVLQG 85
Query: 77 XXXXXXXXXXCTAVKANVLGIKLDLPVDLSLILNNCGKICPSDFKC 122
CT +KAN+LGI +DLP+ LSL++N CGK PSD C
Sbjct: 86 LVDLDAAVCLCTTIKANILGINIDLPISLSLLINTCGKKLPSDCIC 131
>AT5G46890.1 | chr5:19036437-19036820 REVERSE LENGTH=128
Length = 127
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 28 PPAPRPRPSTGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXC 87
P P +P+ +DALKL+VCANVL +VK ++ P CC+ C
Sbjct: 39 PATPSLKPTC----KDALKLKVCANVLDVVKV---SLPPTSNCCALIKGLVDLEAAVCLC 91
Query: 88 TAVKANVLGIKLDLPVDLSLILNNCGKICPSDFKC 122
TA+KANVLGI L++P+ L+++LN+CGK PS FKC
Sbjct: 92 TALKANVLGINLNVPISLNVVLNHCGKKVPSGFKC 126
>AT4G12480.1 | chr4:7406371-7406877 REVERSE LENGTH=169
Length = 168
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 36 STGSCPRDALKLRVCANVLG-LVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANV 94
S+G+CP DAL+L VCANVL L+ ++G + +PCCS CTA++ANV
Sbjct: 81 SSGNCPIDALRLGVCANVLSSLLNIQLGQPSA-QPCCSLIQGLVDLDAAICLCTALRANV 139
Query: 95 LGIKLDLPVDLSLILNNCGKICPSDFKC 122
LGI L++P+ LS++LN C + PS F+C
Sbjct: 140 LGINLNVPISLSVLLNVCNRKVPSGFQC 167
>AT4G12530.1 | chr4:7428141-7428494 REVERSE LENGTH=118
Length = 117
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 38 GSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANVLGI 97
+CPRD LKL C+NVL L+ K+GA A PCCS CTA+K ++LGI
Sbjct: 32 NTCPRDVLKLSTCSNVLNLINLKLGAPA-MRPCCSILFGLIDLDVAVCLCTALKLSLLGI 90
Query: 98 KLDLPVDLSLILNNCGKICPSDFKC 122
+D P+ L+L LN CG P F+C
Sbjct: 91 TIDTPIHLNLALNACGGTLPDGFRC 115
>AT1G12090.1 | chr1:4090176-4090589 REVERSE LENGTH=138
Length = 137
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 42 RDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANVLGIKLD 100
+D LKL VCANVL GL+ +G P EPCCS CTA+KAN+LGI L+
Sbjct: 57 KDTLKLGVCANVLNGLLDLTLGK-PPVEPCCSLIQGLADVEAAVCLCTALKANILGINLN 115
Query: 101 LPVDLSLILNNCGKICPSDFKC 122
LP+ LSL+LN C K P F+C
Sbjct: 116 LPISLSLLLNVCSKQLPPGFQC 137
>AT4G00165.1 | chr4:69433-69819 REVERSE LENGTH=129
Length = 128
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 27 CPPAPRPRPSTGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXX 86
CPP P + +T CPRD LK VC + LGLV +G P + CCS
Sbjct: 34 CPPPPA-KQATTKCPRDTLKFGVCGSWLGLVSEVIG-TPPSQECCSLIKGLADFEAAVCL 91
Query: 87 CTAVKANVLGIK-LDLPVDLSLILNNCGKICPSDFKC 122
CTA+K ++LG+ + +PV L+L+LN+CGK P F C
Sbjct: 92 CTALKTSILGVAPVKIPVALTLLLNSCGKNVPQGFVC 128
>AT4G12470.1 | chr4:7401371-7401856 REVERSE LENGTH=162
Length = 161
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 35 PSTGSCPRDALKLRVCANVLG-LVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKAN 93
S SCP DALKL VCANVL L+ ++G + + CCS CTA++AN
Sbjct: 73 SSGNSCPIDALKLGVCANVLSSLLNIQLGQPSS-QQCCSLIQGLVDVDAAICLCTALRAN 131
Query: 94 VLGIKLDLPVDLSLILNNCGKICPSDFKC 122
VLGI L++P+ LS++LN C + PS F+C
Sbjct: 132 VLGINLNVPISLSVLLNVCNRKLPSGFQC 160
>AT4G12550.1 | chr4:7439176-7439511 FORWARD LENGTH=112
Length = 111
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 36 STGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANVL 95
+TG+CP++++++ C VL LV +G P +PCCS CTAVKA++L
Sbjct: 24 TTGTCPKNSIEIGTCVTVLNLVDLTLGN-PPVKPCCSLIQGLADLEAAVCLCTAVKASIL 82
Query: 96 GI-KLDLPVDLSLILNNCGKICPSDFKC 122
GI ++LP++LS++LN C + P F+C
Sbjct: 83 GIVNINLPINLSVLLNVCSRNAPKSFQC 110
>AT4G12545.1 | chr4:7434260-7434586 FORWARD LENGTH=109
Length = 108
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 36 STGSCPRDALKLRVCANVLGLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANVL 95
+TG+CP +++ CANVL LV +G P +PCCS CTA+KA++L
Sbjct: 24 TTGTCP---IQISTCANVLNLVDLTLGN-PPVKPCCSLIQGLADLEAAACLCTALKASIL 79
Query: 96 GI-KLDLPVDLSLILNNCGKICPSDFKC 122
GI ++LP++LS++LN C + P F+C
Sbjct: 80 GIVNINLPINLSVLLNVCSRNAPKGFQC 107
>AT3G22120.1 | chr3:7795283-7796287 REVERSE LENGTH=335
Length = 334
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 39 SCPRDALKLRVCANVL-GLVKAKVGAVAPYEPCCSXXXXXXXXXXXXXXCTAVKANVLGI 97
+CP D LKL C +VL GL+ +G CC CT +K +L I
Sbjct: 249 TCPIDTLKLGACVDVLGGLIHIGLGKSHAKAECCPVLGGLLDLDAAVCLCTTIKLKLLNI 308
Query: 98 KLDLPVDLSLILNNCGKICPSDFKC 122
L LP+ L L+L +CGK PSDFKC
Sbjct: 309 DLVLPIALELLL-DCGKTPPSDFKC 332
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.141 0.476
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,087,168
Number of extensions: 63773
Number of successful extensions: 308
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 281
Number of HSP's successfully gapped: 24
Length of query: 124
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 38
Effective length of database: 8,748,793
Effective search space: 332454134
Effective search space used: 332454134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 105 (45.1 bits)