BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0550900 Os10g0550900|AK121010
         (490 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38710.1  | chr5:15501340-15503899 FORWARD LENGTH=477          358   2e-99
AT3G30775.1  | chr3:12448880-12451126 REVERSE LENGTH=500          352   3e-97

>AT5G38710.1 | chr5:15501340-15503899 FORWARD LENGTH=477
          Length = 476

 Score =  358 bits (920), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/433 (43%), Positives = 254/433 (58%), Gaps = 8/433 (1%)

Query: 59  FGDTERLFAGERSTSLVRTLAVLQALSVGPLVDVATAALRSPXXXXXXX---XXXXXXXX 115
             D  RLFA    ++L+R+ A+L A S+GP+VD+ +  + S                   
Sbjct: 44  LSDQARLFASVPISTLLRSTAILHATSIGPMVDLGSWLMSSKLMDTTVTRDLVLRIVKGT 103

Query: 116 XYQHFCXXXXXXXXXXXVRRLWRG-GMGGILDYGIEDAEDGPACDRNAAGFLAAIDVAAA 174
            Y HFC           V  ++   G+ G+L YG+E AEDG ACD N   F+  ++ A  
Sbjct: 104 FYDHFCAGEDAAAAARRVSSVYESTGLKGMLVYGVEHAEDGGACDENIQKFIETVEAAKT 163

Query: 175 LPPGS-ASVCIKITALCPVALLEKASDLLRWQQKHPATKLPWKVHGFPVLCVSSXXXXXX 233
           LP    +SV +KITA+CP+ +L++ SDLLRWQ K+P  KLPWK++ FPV    S      
Sbjct: 164 LPSSHLSSVVVKITAICPMNVLKRVSDLLRWQYKNPNFKLPWKLNSFPVFSGLSPLYHTT 223

Query: 234 XXXXXXXXXXXXXXXMAHGRLLAIGERCAEYDIPLLVDAEYATVQPAIDYFTFAGALAFN 293
                           AH RL ++  RC E ++PLL+DAE   +QPAIDY  +  A+ FN
Sbjct: 224 SEPEPLTVEEERELEKAHERLKSVCLRCQESNVPLLIDAEDTILQPAIDYMAYWSAIMFN 283

Query: 294 GG-GRPIVHGTVQAYLRDARDRLEAMARAAQGERVCLALKLVRGAYLAREARLAASLGVP 352
               RPIV+ T+QAYL+DA +RL    R ++   V +  KLVRGAY++ EA+LA SLG  
Sbjct: 284 SDKDRPIVYNTIQAYLKDAGERLHLALRESEKMNVPIGFKLVRGAYMSSEAKLADSLGYK 343

Query: 353 SPVHRSIQDTHDCYNGCAAFLLDRVRRGAA-AVTLATHNVESGQXXXXXXXXXXXXXXXX 411
           SPVH +IQ+THDCYN C +FL+++   G+  AV LATHN +SG+                
Sbjct: 344 SPVHDTIQNTHDCYNDCMSFLMEKASNGSGIAVILATHNTDSGKLGARKASELGINKENG 403

Query: 412 XXXQFAQLMGMADGLSLGLRNAGFQVSKYLPYGPVEQIIPYLIRRAEENRGLLSSSSFDR 471
              +FAQL GM+D LS GL+ AGF VSKY+PYGPV+  IPYLIRRA ENRG++S+ + DR
Sbjct: 404 KI-EFAQLYGMSDALSFGLKRAGFNVSKYMPYGPVDTAIPYLIRRAYENRGMMSTGALDR 462

Query: 472 QLLRKELVRRFKA 484
           QL+RKEL RR  A
Sbjct: 463 QLMRKELKRRVMA 475



>AT3G30775.1 | chr3:12448880-12451126 REVERSE LENGTH=500
          Length = 499

 Score =  352 bits (902), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 185/435 (42%), Positives = 251/435 (57%), Gaps = 8/435 (1%)

Query: 59  FGDTERLFAGERSTSLVRTLAVLQALSVGPLVDVATAALRSPXXXXXXXXXXX---XXXX 115
             D  RLF+   ++ L+R+ AVL A ++GP+VD+ T  + S                   
Sbjct: 65  LSDQARLFSSIPTSDLLRSTAVLHAAAIGPMVDLGTWVMSSKLMDASVTRGMVLGLVKST 124

Query: 116 XYQHFCXXXXXXXXXXXVRRLWRG-GMGGILDYGIEDAEDGPACDRNAAGFLAAIDVAAA 174
            Y HFC           VR ++   G+ G+L YG+E A+D  +CD N   F+  I+ A +
Sbjct: 125 FYDHFCAGEDADAAAERVRSVYEATGLKGMLVYGVEHADDAVSCDDNMQQFIRTIEAAKS 184

Query: 175 LPPGS-ASVCIKITALCPVALLEKASDLLRWQQKHPATKLPWKVHGFPVLCVSSXXXXXX 233
           LP    +SV +KITA+CP++LL++ SDLLRW+ K P  KL WK+  FPV   SS      
Sbjct: 185 LPTSHFSSVVVKITAICPISLLKRVSDLLRWEYKSPNFKLSWKLKSFPVFSESSPLYHTN 244

Query: 234 XXXXXXXXXXXXXXXMAHGRLLAIGERCAEYDIPLLVDAEYATVQPAIDYFTFAGALAFN 293
                           AHGR+  I  +C E ++PLL+DAE   +QPAIDY  ++ A+ FN
Sbjct: 245 SEPEPLTAEEERELEAAHGRIQEICRKCQESNVPLLIDAEDTILQPAIDYMAYSSAIMFN 304

Query: 294 GG-GRPIVHGTVQAYLRDARDRLEAMARAAQGERVCLALKLVRGAYLAREARLAASLGVP 352
               RPIV+ T+QAYLRDA +RL    + A+ E V +  KLVRGAY++ EA LA SLG  
Sbjct: 305 ADKDRPIVYNTIQAYLRDAGERLHLAVQNAEKENVPMGFKLVRGAYMSSEASLADSLGCK 364

Query: 353 SPVHRSIQDTHDCYNGCAAFLLDRVRRGAA-AVTLATHNVESGQXXXXXXXXXXXXXXXX 411
           SPVH +IQDTH CYN C  FL+++   G+   V LATHN +SG+                
Sbjct: 365 SPVHDTIQDTHSCYNDCMTFLMEKASNGSGFGVVLATHNADSGR-LASRKASDLGIDKQN 423

Query: 412 XXXQFAQLMGMADGLSLGLRNAGFQVSKYLPYGPVEQIIPYLIRRAEENRGLLSSSSFDR 471
              +FAQL GM+D LS GL+ AGF VSKY+P+GPV   IPYL+RRA ENRG++++ + DR
Sbjct: 424 GKIEFAQLYGMSDALSFGLKRAGFNVSKYMPFGPVATAIPYLLRRAYENRGMMATGAHDR 483

Query: 472 QLLRKELVRRFKAAM 486
           QL+R EL RR  A +
Sbjct: 484 QLMRMELKRRLIAGI 498



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,398,394
Number of extensions: 246319
Number of successful extensions: 580
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 568
Number of HSP's successfully gapped: 2
Length of query: 490
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 387
Effective length of database: 8,282,721
Effective search space: 3205413027
Effective search space used: 3205413027
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)