BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0549100 Os10g0549100|AK100377
(233 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47180.1 | chr5:19161384-19163265 REVERSE LENGTH=221 248 2e-66
AT4G00170.1 | chr4:70732-72085 REVERSE LENGTH=240 165 2e-41
AT3G60600.1 | chr3:22400537-22402408 FORWARD LENGTH=257 149 1e-36
AT2G45140.1 | chr2:18611029-18612971 FORWARD LENGTH=240 143 7e-35
AT1G08820.1 | chr1:2821810-2824412 REVERSE LENGTH=387 127 5e-30
AT1G51270.3 | chr1:19007577-19011225 FORWARD LENGTH=638 112 1e-25
AT2G23830.1 | chr2:10143646-10144511 FORWARD LENGTH=150 107 8e-24
AT4G05060.1 | chr4:2590245-2592000 REVERSE LENGTH=288 60 1e-09
AT4G21450.3 | chr4:11426136-11428125 FORWARD LENGTH=315 59 2e-09
AT5G54110.1 | chr5:21958356-21960367 FORWARD LENGTH=267 54 6e-08
>AT5G47180.1 | chr5:19161384-19163265 REVERSE LENGTH=221
Length = 220
Score = 248 bits (633), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 157/230 (68%), Gaps = 18/230 (7%)
Query: 3 ASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQP 62
+LISI P++L FLFEL+K YC+LKV N +E++VAFKVKTTSP+KYFVRPN +IQP
Sbjct: 5 GENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQP 64
Query: 63 WDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKL 122
WDSC I +TLQAQ+EYPPDMQCKDKFL+QST V TD+DE+P +TF K+ K + E KL
Sbjct: 65 WDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKL 124
Query: 123 KVVYTVPSGS--SDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQTIQRLKDERDTTLQQ 180
KV Y PS + S +SG T+ +S E I TIQRLK+ERD ++Q
Sbjct: 125 KVSYITPSTTQRSSESGATNGDGQSS---------------ETISTIQRLKEERDAAVKQ 169
Query: 181 NQQMQRELDVIRRRRS-RKSDAGFSLTFAAFAGLIGVLIGLLMSLIFPRP 229
QQ+Q EL+ +RRRR+ R S G SL AA GLIG++IG ++ L P
Sbjct: 170 TQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASP 219
>AT4G00170.1 | chr4:70732-72085 REVERSE LENGTH=240
Length = 239
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 145/237 (61%), Gaps = 15/237 (6%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHH-VAFKVKTTSPRKYFVRPNASIIQP 62
+G L++I+P +L F FEL K C++++ N + VAFKVKTT+PRKY VRPN ++ P
Sbjct: 3 TGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLP 62
Query: 63 WDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKL 122
DSC +T+T+QAQKE P DMQCKDKFL+Q+ V+ T E+ FNKE +VIE+ KL
Sbjct: 63 GDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKL 122
Query: 123 KVVYT-------VPSGSSD-DSGITSLGSRSFKLGS--DDLTM----LKNASIEKIQTIQ 168
+VVY VP GS + +S + SL + + S DD++ S E I
Sbjct: 123 RVVYIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMIS 182
Query: 169 RLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFSLTFAAFAGLIGVLIGLLMSLI 225
+L +E+ + QQ+Q+++ EL+++R+ S+K G SL GL+G +IG L++ I
Sbjct: 183 KLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLNRI 239
>AT3G60600.1 | chr3:22400537-22402408 FORWARD LENGTH=257
Length = 256
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 17/216 (7%)
Query: 3 ASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQP 62
++ L+++ P DL F FEL K C+L + N ++++VAFKVKTT+P+KY VRPN ++ P
Sbjct: 18 SNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLP 77
Query: 63 WDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKL 122
+C + +T+QAQKE P DMQCKDKFL+Q + E+ P F+KE +EE KL
Sbjct: 78 RSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKL 137
Query: 123 KVVYTVP------------SGSSDDSGITSLGSRS----FKLGSDDLTMLKNASIEKIQT 166
+V Y P GSS + ++ G S + D+ + + E
Sbjct: 138 RVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARAL 197
Query: 167 IQRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAG 202
I +L +E+ + +Q N ++QRELD + RR S+KS +G
Sbjct: 198 ITKLTEEKQSAIQLNNRLQRELDQL-RRESKKSQSG 232
>AT2G45140.1 | chr2:18611029-18612971 FORWARD LENGTH=240
Length = 239
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 122/221 (55%), Gaps = 18/221 (8%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
S L++I P DL F FEL K C+L + N ++++VAFKVKTT+P+KY VRPN ++ P
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
S + +T+QAQKE P D+QCKDKFL+Q + ++ F+KE +EE KL+
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 124 VVYTVP------------SGSSDDSGITSLGSRS-----FKLGSDDLTMLKNASIEKIQT 166
VVY P GSS + ++ G+ S + +D + N+S E
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSS-EARAL 180
Query: 167 IQRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFSLTF 207
+ +L +E+++ +Q N ++Q+ELD +RR R G +
Sbjct: 181 VTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMY 221
>AT1G08820.1 | chr1:2821810-2824412 REVERSE LENGTH=387
Length = 386
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 86/134 (64%)
Query: 7 LISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSC 66
L+ I P L F +L K C +++ N + H+VAFKVKTTSP+KY VRPN ++ P +C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 67 TITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVY 126
T+ +QA KE PPDM CKDKFLIQST V+A T ++I + F+K K IEE KL+V
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 127 TVPSGSSDDSGITS 140
PS S + S I +
Sbjct: 125 VPPSDSPELSPINT 138
>AT1G51270.3 | chr1:19007577-19011225 FORWARD LENGTH=638
Length = 637
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
S L+ I P D+ F EL+K C+L + N +E++VAFK KTT+ +KY+VRPN ++ P
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
SC + + +QA KE P DMQC+DK L Q V T ++ F+KE EE +LK
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 124 VVYTVP------------SGSSDDSGITSLGSRSFKLGSDDLTMLKNASIEKIQTIQRLK 171
V+Y P GSS + ++ G+ S + ML++ +
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNASEAF----VDMLRSLLVPLFSNAASST 348
Query: 172 DERDTTLQQNQ 182
D+ TL Q Q
Sbjct: 349 DDHGITLPQYQ 359
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 3 ASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQP 62
++ L++ D+ F EL+K C+L + N ++++VAFK +TT P+ Y V+P+ ++ P
Sbjct: 2 STDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLP 61
Query: 63 WDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKL 122
SC + + +QA KE P D QCKDK L Q V T E+ F+KE +EE
Sbjct: 62 RSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIF 121
Query: 123 KVVYTVP------------SGSSDDSGITSLGSRS 145
K++Y P GSS + ++ G+ S
Sbjct: 122 KIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGNAS 156
>AT2G23830.1 | chr2:10143646-10144511 FORWARD LENGTH=150
Length = 149
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 3 ASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQP 62
++ L+ I P L F FEL K C+L + N ++++VAFKVKTT+ Y VRPN +I P
Sbjct: 2 SNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILP 61
Query: 63 WDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKL 122
+C + +T+QAQKE P DMQ +KF+IQS + E+ F+KE V+EE KL
Sbjct: 62 KSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKL 121
Query: 123 KVVYTVPSGSSDDSGITS 140
+V Y S + ITS
Sbjct: 122 RVTYVC----STTTNITS 135
>AT4G05060.1 | chr4:2590245-2592000 REVERSE LENGTH=288
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 15 LTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSCTIT----I 70
L F +E K +K+ N S+ HVAFK +TT P+ F+RP +I+ P + T +
Sbjct: 108 LYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFV 167
Query: 71 TLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVYTVP 129
E P + + KF I S K+ TD P F ++ D V EE ++VV+ P
Sbjct: 168 EPPENNEKPMEQKSGVKFKIMSLKMKVPTDYM---PELFEEQKDHVSEEQVMRVVFLDP 223
>AT4G21450.3 | chr4:11426136-11428125 FORWARD LENGTH=315
Length = 314
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 20 ELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSCTIT----ITLQAQ 75
E K +K+ N S+ HVAFK +TT+P+ F+RP +I+ P ++ T +
Sbjct: 140 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 199
Query: 76 KEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVYTVPSGSS 133
E P D + + KF I S KV MD + P F+++ D V +E L+V++ P S+
Sbjct: 200 NEKPMDQRSRVKFKIMSLKVKGP--MDYV-PELFDEQKDDVSKEQILRVIFLDPERSN 254
>AT5G54110.1 | chr5:21958356-21960367 FORWARD LENGTH=267
Length = 266
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 15 LTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPWDSCTITI---- 70
L F +E K +K+ N S+ H AFK +TT+P+ ++RP ++ P +S T+
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 71 -TLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLKVVY 126
+ ++ P + + K KF I S KV E P F+++ D+V E L+V++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIF 198
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,881,924
Number of extensions: 196611
Number of successful extensions: 719
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 714
Number of HSP's successfully gapped: 11
Length of query: 233
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 138
Effective length of database: 8,502,049
Effective search space: 1173282762
Effective search space used: 1173282762
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)