BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0544200 Os10g0544200|AK063669
(380 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65640.1 | chr5:26237137-26238904 FORWARD LENGTH=352 177 6e-45
AT5G10570.1 | chr5:3341357-3342877 FORWARD LENGTH=316 166 2e-41
AT3G26744.1 | chr3:9832953-9834790 REVERSE LENGTH=495 117 7e-27
AT1G12860.1 | chr1:4384758-4386392 FORWARD LENGTH=451 117 1e-26
AT2G16910.1 | chr2:7331721-7334077 FORWARD LENGTH=572 71 8e-13
AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567 62 5e-10
AT4G29930.3 | chr4:14644108-14645505 FORWARD LENGTH=264 62 7e-10
AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591 58 9e-09
AT4G09820.1 | chr4:6182067-6186261 FORWARD LENGTH=519 55 9e-08
AT5G46760.1 | chr5:18974231-18976009 FORWARD LENGTH=593 54 1e-07
AT4G17880.1 | chr4:9933702-9935471 REVERSE LENGTH=590 54 1e-07
AT1G32640.1 | chr1:11799042-11800913 REVERSE LENGTH=624 54 1e-07
AT1G63650.1 | chr1:23599809-23602734 FORWARD LENGTH=597 54 2e-07
AT5G57150.4 | chr5:23152361-23154801 FORWARD LENGTH=265 53 2e-07
AT2G28160.1 | chr2:12004713-12005908 FORWARD LENGTH=319 53 3e-07
AT5G46830.1 | chr5:19002719-19004254 FORWARD LENGTH=512 52 4e-07
AT4G00870.1 | chr4:362230-363639 REVERSE LENGTH=424 50 2e-06
>AT5G65640.1 | chr5:26237137-26238904 FORWARD LENGTH=352
Length = 351
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 122/188 (64%), Gaps = 10/188 (5%)
Query: 192 GAPSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
G PSKNLMAE LNDRLSMLRS+VP+ISKMDRTSILGD I Y+KEL+D+I LQ E
Sbjct: 174 GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE 233
Query: 252 AATGDXXXXXTENLSMLKLNTLKXXXXXXXGEETPLIRNSTRFEVERRENGSTRIEMACA 311
+ L L PL+RNS +FE++RR+ TR+++ C+
Sbjct: 234 EQELGNSNNSHHSKLFGDLKDLNA--------NEPLVRNSPKFEIDRRDE-DTRVDICCS 284
Query: 312 AIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRS 371
P LL ST+ LE LG+EIEQCVISCF DF++QASC + ++R+ +E+IKQ LFR+
Sbjct: 285 PKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFIT-SEDIKQALFRN 343
Query: 372 AGYGDGCL 379
AGYG CL
Sbjct: 344 AGYGGSCL 351
>AT5G10570.1 | chr5:3341357-3342877 FORWARD LENGTH=316
Length = 315
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 121/188 (64%), Gaps = 19/188 (10%)
Query: 192 GAPSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
G PSKNLMAE LNDRLS+LRS+VP+I+KMDRTSILGD I Y+KEL+D+I LQ +
Sbjct: 147 GQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQED 206
Query: 252 AATGDXXXXXTENLSMLKLNTLKXXXXXXXGEETPLIRNSTRFEVERRENGSTRIEMACA 311
+ +LS L N ++RNS +FEV++RE +T I++ C
Sbjct: 207 ----EQELGSNSHLSTLITN-------------ESMVRNSLKFEVDQRE-VNTHIDICCP 248
Query: 312 AIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRS 371
P L+ ST++ LE LG+EIEQCVISCF DF++QASC + ++R M +E KQ L R+
Sbjct: 249 TKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT-SEATKQALIRN 307
Query: 372 AGYGDGCL 379
AGYG CL
Sbjct: 308 AGYGGRCL 315
>AT3G26744.1 | chr3:9832953-9834790 REVERSE LENGTH=495
Length = 494
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
Query: 194 PSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAA 253
P+KNLMAE LNDRL MLRSVVP+ISKMDR SILGD I Y+KEL+ RI +L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 254 TGDXXXXXTENLSMLKLNTLKXXXXXXXGEE-------TPLIRNSTRFEVERRENGSTRI 306
+ + S L EE +P + + R EV RE + I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQA-RVEVRLREGRAVNI 423
Query: 307 EMACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQA-SCLQDDKKREMTRDTEEIK 365
M C P LL +T+ AL+ LG++++Q VISCF+ FA+ Q + +E+ D +IK
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPD--QIK 481
Query: 366 QTLFRSAGY 374
LF +AGY
Sbjct: 482 AVLFDTAGY 490
>AT1G12860.1 | chr1:4384758-4386392 FORWARD LENGTH=451
Length = 450
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 194 PSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAA 253
P+KNLMAE LNDRL MLRSVVP+ISKMDR SILGD I Y+KEL+ RI +L E
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 254 TGDXXXXXTENLSMLKLNTLKXXXXXXXGEETPLIR---NSTRFEVERRENGSTRIEMAC 310
+ L+ TL + L R EV RE + I M C
Sbjct: 325 STPPSSSSLHPLTPTP-QTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFC 383
Query: 311 AAIPELLPSTLAALEALGVEIEQCVISCFDDFAM---QASCLQDDKKREMTRDTEEIKQT 367
P LL ST+ AL+ LG++++Q VISCF+ FA+ +A Q+D E+IK
Sbjct: 384 GRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVL----PEQIKAV 439
Query: 368 LFRSAGYG 375
L +AGY
Sbjct: 440 LLDTAGYA 447
>AT2G16910.1 | chr2:7331721-7334077 FORWARD LENGTH=572
Length = 571
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 41/57 (71%)
Query: 195 SKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
+KNLMAE LNDRL LRS+VPRI+K+DR SILGD I YVKEL + K LQ E
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDE 369
>AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567
Length = 566
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 182 RPRS-CRPPQPG--APSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYV 238
RPR R P G P ++ AE LN R LRSVVP ISKMD+ S+LGD I Y+
Sbjct: 378 RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYI 437
Query: 239 KELMDRIKNLQVEAATGDXXXXXTENLSM 267
KEL +++K ++ E D + +++
Sbjct: 438 KELQEKVKIMEDERVGTDKSLSESNTITV 466
>AT4G29930.3 | chr4:14644108-14645505 FORWARD LENGTH=264
Length = 263
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 193 APSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
A SKN+++E LN RL LRSVVP ISK+D+ S++ D+I Y++EL+D+ K L+ E
Sbjct: 51 ASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591
Length = 590
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 182 RPRSCRPPQPGAPSKNLM-AEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKE 240
R R RP A + N + AE LN R LRSVVP ISKMD+ S+LGD + Y+ E
Sbjct: 418 RKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINE 477
Query: 241 LMDRIKNLQVE 251
L ++K ++ E
Sbjct: 478 LHAKLKVMEAE 488
>AT4G09820.1 | chr4:6182067-6186261 FORWARD LENGTH=519
Length = 518
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 197 NLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQ 249
+++AE LN++ LRS+VP ++KMD+ SILGDTI YV L R+ L+
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>AT5G46760.1 | chr5:18974231-18976009 FORWARD LENGTH=593
Length = 592
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 182 RPRS-CRPPQPG--APSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYV 238
+PR R P G P ++ AE LN R LR+VVP +SKMD+ S+LGD I Y+
Sbjct: 398 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 457
Query: 239 KELMDRIK 246
EL +++
Sbjct: 458 NELKSKLQ 465
>AT4G17880.1 | chr4:9933702-9935471 REVERSE LENGTH=590
Length = 589
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 182 RPRS-CRPPQPG--APSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYV 238
+PR R P G P ++ AE LN R LR+VVP +SKMD+ S+LGD I Y+
Sbjct: 399 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 458
Query: 239 KELMDRIK 246
EL +++
Sbjct: 459 SELKSKLQ 466
>AT1G32640.1 | chr1:11799042-11800913 REVERSE LENGTH=624
Length = 623
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 182 RPRS-CRPPQPG--APSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYV 238
RP+ R P G P ++ AE LN R LR+VVP +SKMD+ S+LGD I Y+
Sbjct: 435 RPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYI 494
Query: 239 KELMDRIKNLQVE 251
EL ++ + E
Sbjct: 495 NELKSKVVKTESE 507
>AT1G63650.1 | chr1:23599809-23602734 FORWARD LENGTH=597
Length = 596
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 188 PPQPGAPSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKN 247
P P + ++E LN+R LRS++P ISK+D+ SIL DTI Y+++L R++
Sbjct: 397 PDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
Query: 248 LQ 249
L+
Sbjct: 457 LE 458
>AT5G57150.4 | chr5:23152361-23154801 FORWARD LENGTH=265
Length = 264
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 195 SKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
SKN+++E LN RL LRSVVP I+KMD+ SI+ D I Y++ L K L+ E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE 110
>AT2G28160.1 | chr2:12004713-12005908 FORWARD LENGTH=319
Length = 318
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 195 SKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAAT 254
S+ L++E + D+L LRS+VP I+KMD+ SI+GD + YV+EL + K L+ + A
Sbjct: 130 SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAG 189
Query: 255 GDXXXXXTENLSMLKLNTLKXXXXXXXGEETPLIRNSTRFEVERRENGSTRIEMACAAIP 314
+ T + K G P + + +V + E + + C
Sbjct: 190 LEASLNSTGGYQEHAPDAQK--TQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGE 247
Query: 315 ELLPSTLAALEAL 327
+ PS +LE+L
Sbjct: 248 GVAPSLYKSLESL 260
>AT5G46830.1 | chr5:19002719-19004254 FORWARD LENGTH=512
Length = 511
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 194 PSKNLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
P ++ AE LN R LR+VVP +SKMD+TS+L D + Y+ EL + +N+++E
Sbjct: 341 PLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELE 398
>AT4G00870.1 | chr4:362230-363639 REVERSE LENGTH=424
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 197 NLMAEXXXXXXLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
++ AE LN R LR++VP++S+MD+ S+L D + Y++ L +I +L+ E
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE 304
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,552,636
Number of extensions: 165997
Number of successful extensions: 497
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 491
Number of HSP's successfully gapped: 17
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)