BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0543500 Os10g0543500|AK106264
(255 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51420.1 | chr3:19084082-19085451 FORWARD LENGTH=371 268 2e-72
AT3G51430.1 | chr3:19086548-19087909 FORWARD LENGTH=372 267 4e-72
AT3G51440.1 | chr3:19089114-19090537 FORWARD LENGTH=372 266 1e-71
AT3G51450.1 | chr3:19091013-19092393 FORWARD LENGTH=372 263 7e-71
AT3G59530.1 | chr3:21993710-21995164 FORWARD LENGTH=404 136 8e-33
AT5G22020.1 | chr5:7287878-7289357 REVERSE LENGTH=396 131 4e-31
AT1G08470.1 | chr1:2682262-2683977 REVERSE LENGTH=391 129 1e-30
AT3G57030.1 | chr3:21101653-21103204 REVERSE LENGTH=375 121 5e-28
AT3G57020.1 | chr3:21098515-21100303 REVERSE LENGTH=371 110 6e-25
AT2G41290.1 | chr2:17210599-17212904 REVERSE LENGTH=377 92 2e-19
AT1G74010.1 | chr1:27832432-27834017 REVERSE LENGTH=326 92 3e-19
AT3G57010.1 | chr3:21095854-21097316 REVERSE LENGTH=377 91 4e-19
AT2G41300.1 | chr2:17214312-17216292 REVERSE LENGTH=395 90 1e-18
AT1G74020.1 | chr1:27835289-27837277 REVERSE LENGTH=336 88 5e-18
AT1G74000.1 | chr1:27829266-27831401 REVERSE LENGTH=330 77 9e-15
>AT3G51420.1 | chr3:19084082-19085451 FORWARD LENGTH=371
Length = 370
Score = 268 bits (685), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/249 (51%), Positives = 180/249 (72%), Gaps = 5/249 (2%)
Query: 5 GGLVVADADIGLLKVSPD-KAVELLTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSLA 63
G ++VADA+ GLL +S K ELLTDEA+GV+F LTD V VA +GV+YFTDAS K+
Sbjct: 124 GEVIVADANKGLLSISDGGKKTELLTDEADGVRFKLTDAVTVADNGVLYFTDASSKYDFY 183
Query: 64 EFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSRY 123
+F+ D LE +PHGR+MSFDP+TR T VL + LYFANG+++SPDQ VFCET+MRRCS+Y
Sbjct: 184 QFIFDFLEGKPHGRVMSFDPTTRATRVLLKDLYFANGISMSPDQTHFVFCETIMRRCSKY 243
Query: 124 HINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMV 183
+I+ ++ V+ FI LPG+PDNIRYDG+G YWIA+ + T W + + F+RKL+YM
Sbjct: 244 YISEER---VEVFIQGLPGYPDNIRYDGDGHYWIALISEVTTSWKLSMKYLFLRKLIYMA 300
Query: 184 DRFVVAVPHNLKNAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRI 243
++ V + ++KNA + V L G P++MY D + T +K+G++LY+GSL Y++R+
Sbjct: 301 AKYGVELL-SIKNAAVLQVDLDGNPIAMYHDHPFSHITSGVKIGNHLYFGSLLHSYITRL 359
Query: 244 DLAKSPAEK 252
DL K PA+K
Sbjct: 360 DLLKYPAQK 368
>AT3G51430.1 | chr3:19086548-19087909 FORWARD LENGTH=372
Length = 371
Score = 267 bits (683), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/251 (52%), Positives = 181/251 (72%), Gaps = 5/251 (1%)
Query: 5 GGLVVADADIGLLKVSPD-KAVELLTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSLA 63
G ++VADA GLL +S D K ELLTD+AEGVKF LTD V VA +GV+YFTDAS+K++L
Sbjct: 124 GEVIVADAYKGLLNISGDGKKTELLTDQAEGVKFKLTDVVAVADNGVLYFTDASYKYTLH 183
Query: 64 EFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSRY 123
+ D+LE +PHGRLMSFDP+TR T VL + LYFANGV++SPDQ L+FCET MRRCS+Y
Sbjct: 184 QVKFDILEGKPHGRLMSFDPTTRVTRVLLKDLYFANGVSMSPDQTHLIFCETPMRRCSKY 243
Query: 124 HINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMV 183
+IN ++ V+ FI LPG+PDNIRYDG+G YWIA+ +G + W + + PF+RK+ +
Sbjct: 244 YINEER---VEVFIQGLPGYPDNIRYDGDGHYWIAMVSGASTLWRLSMKYPFLRKITAIA 300
Query: 184 DRFVVAVPHNLKNAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRI 243
++ V + +KNAG + V L G P++ Y D L+ T +K+G+YLY G++ Y+ R+
Sbjct: 301 AKYGVELMF-MKNAGVLQVDLDGNPIAYYHDQRLSHITTGIKIGNYLYCGNILHSYIIRL 359
Query: 244 DLAKSPAEKAQ 254
DL K PA+K +
Sbjct: 360 DLLKYPAQKKK 370
>AT3G51440.1 | chr3:19089114-19090537 FORWARD LENGTH=372
Length = 371
Score = 266 bits (679), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/251 (52%), Positives = 178/251 (70%), Gaps = 5/251 (1%)
Query: 5 GGLVVADADIGLLKVSPD-KAVELLTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSLA 63
G ++VADA GLL +S D K ELLT+EA+GV+F L D V VA +GV+YFTD S+K++L
Sbjct: 124 GEVIVADAYKGLLNISGDGKKTELLTEEADGVRFKLPDAVTVADNGVLYFTDGSYKYNLH 183
Query: 64 EFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSRY 123
+F D+LE +PHGRLMSFDP+T+ T VL R LYFANGV++SPDQ LVFCET +RRCS+Y
Sbjct: 184 QFSFDILEGKPHGRLMSFDPTTKVTRVLLRDLYFANGVSLSPDQTHLVFCETPIRRCSKY 243
Query: 124 HINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMV 183
+ING G V+ FI LPG+PDNIRYDG+G YWIA+ +G T W + + PF+RK+ M
Sbjct: 244 YING---GRVELFIQGLPGYPDNIRYDGDGHYWIAMPSGVTTLWKLSMKYPFLRKITAMA 300
Query: 184 DRFVVAVPHNLKNAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRI 243
++ P ++NAG + V L G P++ Y D L+ T +K+G+YLY GSL ++ R+
Sbjct: 301 AKYGYE-PMFMENAGVLQVDLDGNPIAYYHDQALSHITTGVKIGNYLYCGSLWHSHILRL 359
Query: 244 DLAKSPAEKAQ 254
DL K PA+ +
Sbjct: 360 DLLKYPAQNKK 370
>AT3G51450.1 | chr3:19091013-19092393 FORWARD LENGTH=372
Length = 371
Score = 263 bits (672), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 179/251 (71%), Gaps = 5/251 (1%)
Query: 5 GGLVVADADIGLLKVSPD-KAVELLTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSLA 63
G ++VAD GLL +S D K ELLTDEA+GVKF LTD V VA +GV+YFTDAS+K++L
Sbjct: 124 GEVIVADVHKGLLNISGDGKKTELLTDEADGVKFKLTDAVTVADNGVLYFTDASYKYTLN 183
Query: 64 EFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSRY 123
+ +D+LE +P GRL+SFDP+TR T VL + LYFANG+ +SPDQ L+FCET M+RCS+Y
Sbjct: 184 QLSLDMLEGKPFGRLLSFDPTTRVTKVLLKDLYFANGITISPDQTHLIFCETPMKRCSKY 243
Query: 124 HINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVYMV 183
+I+ ++ V+ F LPG+PDNIRYDG+G YWIA+ +G T W++ + PF+RKL MV
Sbjct: 244 YISEER---VEVFTQSLPGYPDNIRYDGDGHYWIALPSGVTTLWNISLKYPFLRKLTAMV 300
Query: 184 DRFVVAVPHNLKNAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLSRI 243
++ V + ++NAG + V L G P++ Y DP L+ K+G YLY GSL++ ++ R+
Sbjct: 301 AKYGVDLMF-MENAGVLQVDLDGNPIAYYHDPKLSHIATCDKIGKYLYCGSLSQSHILRL 359
Query: 244 DLAKSPAEKAQ 254
DL K PA+ +
Sbjct: 360 DLLKYPAQNKK 370
>AT3G59530.1 | chr3:21993710-21995164 FORWARD LENGTH=404
Length = 403
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
Query: 5 GGLVVADADIGLLKVSPDKAVEL-LTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSLA 63
G L +ADA GLL V P+ + L EG + +D+ +G I+FTD S ++ A
Sbjct: 162 GNLYIADAYYGLLVVGPEGGIATPLATHVEGKPILFANDLDIHRNGSIFFTDTSKRYDRA 221
Query: 64 EFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSRY 123
+LE GRL+ +DP T+ T ++ GL F NG+ +S DQ L+F ET R +Y
Sbjct: 222 NHFFILLEGESTGRLLRYDPPTKTTHIVLEGLAFPNGIQLSKDQSFLLFTETTNCRLVKY 281
Query: 124 HINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLVY 181
+ G K G V+ + DLPGFPDN+R + EG++W+AI RT +VLT +P++R + +
Sbjct: 282 WLEGPKMGEVE-VVADLPGFPDNVRINEEGQFWVAIDCCRTPAQEVLTNNPWIRSIYF 338
>AT5G22020.1 | chr5:7287878-7289357 REVERSE LENGTH=396
Length = 395
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
Query: 5 GGLVVADADIGLLKVSPDKAVEL-LTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSLA 63
G L +ADA +GLLKV P+ + L EAEGV T+ +D+A DG +YFTD+S +
Sbjct: 148 GDLYIADAYMGLLKVGPEGGLATPLVTEAEGVPLGFTNDLDIADDGTVYFTDSSISYQRR 207
Query: 64 EFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSRY 123
F+ V GR++ +DP ++ VL L F NGV++S D VFCE + RY
Sbjct: 208 NFLQLVFSGDNTGRVLKYDPVAKKAVVLVSNLQFPNGVSISRDGSFFVFCEGDIGSLRRY 267
Query: 124 HINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLV 180
+ G+KAGT D F LPG PDN+R + +G +W+A+ R ++ R P +R +
Sbjct: 268 WLKGEKAGTTDVF-AYLPGHPDNVRTNQKGEFWVALHCRRNYYSYLMARYPKLRMFI 323
>AT1G08470.1 | chr1:2682262-2683977 REVERSE LENGTH=391
Length = 390
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 4 DGGLVVADADIGLLKVSPDKAVEL-LTDEAEGVKFALTDGVDVAGDGVIYFTDASHKHSL 62
+G L +ADA +G++KV P+ + +T+EA+GV T+ +D+ +G +YFTD+S
Sbjct: 141 NGDLYIADAYLGIMKVGPEGGLATSVTNEADGVPLRFTNDLDIDDEGNVYFTDSSSFFQR 200
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
+FM+ ++ GR++ ++P T+ TT L R L F NG+++ D +FCE + R +
Sbjct: 201 RKFMLLIVSGEDSGRVLKYNPKTKETTTLVRNLQFPNGLSLGKDGSFFIFCEGSIGRLRK 260
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKL 179
Y + G+KAGT + + L GFPDNIR + +G +W+A+ R + ++ P VRK
Sbjct: 261 YWLKGEKAGT-SEVVALLHGFPDNIRTNKDGDFWVAVHCHRNIFTHLMAHYPRVRKF 316
>AT3G57030.1 | chr3:21101653-21103204 REVERSE LENGTH=375
Length = 374
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 22/256 (8%)
Query: 5 GGLVVADADIGLLKVSPDKAV-ELLTDEAEGVKFALTDGVDV-AGDGVIYFTDASHKHSL 62
G L +ADA GLL V P + + L EAEG F T+ +D+ + VIYFTD S +
Sbjct: 126 GDLYIADAYFGLLVVGPAGGLAKPLVTEAEGQPFRFTNDLDIDEQEDVIYFTDTSARFQR 185
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
+F+ VL GR + +D S+++ TVL +GL FANGVA+S D+ ++ ET + R
Sbjct: 186 RQFLAAVLNVDKTGRFIKYDRSSKKATVLLQGLAFANGVALSKDRSFVLVVETTTCKILR 245
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGR--------TLQW--DVLTR 172
++G AGT F +LPGFPDNIR + G +W+A+ + + T W D++ R
Sbjct: 246 LWLSGPNAGTHQVF-AELPGFPDNIRRNSNGEFWVALHSKKGLFAKLSLTQTWFRDLVLR 304
Query: 173 SPFVRKLVYMVDRFVVAVPHNLKNAGAMSVTLAGEPVSMYSD---PGLALTTGWLKVGDY 229
P + ++ + F +PH A A+ ++ +G+ + + D L + +
Sbjct: 305 LPISPQRLHSL--FTGGIPH----ATAIKLSESGKVLEVLEDKEGKTLRFISEVEEKDGK 358
Query: 230 LYYGSLTKPYLSRIDL 245
L+ GS+ P+L DL
Sbjct: 359 LWIGSVLVPFLGVYDL 374
>AT3G57020.1 | chr3:21098515-21100303 REVERSE LENGTH=371
Length = 370
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 6/207 (2%)
Query: 5 GGLVVADADIGLLKVSPDKAV-ELLTDEAEGVKFALTDGVDV-AGDGVIYFTDASHKHSL 62
G L + D +GL+KV P+ + EL+ DEAEG K + D+ + V YF D+S K+
Sbjct: 120 GDLYICDGYLGLMKVGPEGGLAELIVDEAEGRKVMFANQGDIDEEEDVFYFNDSSDKYHF 179
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
+ + GR++ +D T+ V+ L NG+A++ D+ L+ CE+ R
Sbjct: 180 RDVFFVAVSGERSGRVIRYDKKTKEAKVIMDNLVCNNGLALNKDRSFLITCESGTSLVHR 239
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLV-- 180
Y I G KAGT D F +PG+PDNIR G +WI + + L ++ + ++ KLV
Sbjct: 240 YWIKGPKAGTRDIF-AKVPGYPDNIRLTSTGDFWIGLHCKKNLIGRLIVKYKWLGKLVEK 298
Query: 181 YMVDRFVVAVPHNLKNAGAMSVTLAGE 207
M +V+A + K G ++V ++GE
Sbjct: 299 TMKLEYVIAFINGFKPHG-VAVKISGE 324
>AT2G41290.1 | chr2:17210599-17212904 REVERSE LENGTH=377
Length = 376
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 3 ADGGLVVADADIGLLKVSPDKAV--ELLTDE-AEGVKFALTDGVDV-AGDGVIYFTDASH 58
+ G L +ADA +GLLKV P V ++L E E ++F T+ +D+ GV+YFTD+S
Sbjct: 120 STGDLYIADAYMGLLKVGPTGGVATQVLPRELNEALRF--TNSLDINPRTGVVYFTDSSS 177
Query: 59 KHSLAEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMR 118
+ ++ ++ GRLM +D +T++ T L L F NGVA+S + D L+ ET M
Sbjct: 178 VYQRRNYIGAMMSGDKTGRLMKYD-NTKQVTTLLSNLAFVNGVALSQNGDYLLVVETAMC 236
Query: 119 RCSRYHINGD--KAGTVDK---FIGDLPGFPDNIRYDGEGRYWIAIS 160
R RY +N K+ + D F LPGFPDNI+ G +W+ ++
Sbjct: 237 RILRYWLNETSVKSQSHDNYEIFAEGLPGFPDNIKRSPRGGFWVGLN 283
>AT1G74010.1 | chr1:27832432-27834017 REVERSE LENGTH=326
Length = 325
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 110/244 (45%), Gaps = 28/244 (11%)
Query: 5 GGLVVADADIGLLKVSPDKAVEL-LTDEAEGVKFALTDGVDV-AGDGVIYFTDASHKHSL 62
G L VADA +GL +SP + L D +G F DG+DV GV+YFT S K
Sbjct: 107 GDLYVADAPLGLHVISPAGGLATKLADSVDGKPFKFLDGLDVDPTTGVVYFTSFSSKFGP 166
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
E ++ V G+L +DP+T+ T L GL A G AVS D ++ E + +
Sbjct: 167 REVLIAVGLKDASGKLFKYDPATKAVTELMEGLSGAAGCAVSSDGSFVLVSEFIKSNIKK 226
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGE-GRYWIAISAGRTLQWDVLTRSPFVRKLVY 181
Y I G KAGT++ F L PDNIR G G +W+A V K+V
Sbjct: 227 YWIKGPKAGTIEDF-SSLVSNPDNIRRVGSTGNFWVA---------------SVVNKVVM 270
Query: 182 MVDRFVVAVPHNLKNAGAMSVTLAGEPVSMYSDPGLALTTGWLKVGDYLYYGSLTKPYLS 241
D V + N K + + + ++ G L + + +LY G+LT P+
Sbjct: 271 PTDPRAVKLDANGKVL---------QTIFLKNEFGNTLLSEVNEFNGHLYIGTLTGPFAG 321
Query: 242 RIDL 245
+ L
Sbjct: 322 VMKL 325
>AT3G57010.1 | chr3:21095854-21097316 REVERSE LENGTH=377
Length = 376
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 5 GGLVVADADIGLLKVSPDKAV-ELLTDEAEGVKFALTDGVDV-AGDGVIYFTDASHKHSL 62
G L + D G++KV P+ + EL+ DEAEG K + D+ + + YF D+S +
Sbjct: 121 GDLYICDGYFGVMKVGPEGGLAELVVDEAEGRKVMFANQGDIDEEEDIFYFNDSSDTYHF 180
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
+ L GR++ +D + V+ L NG+A+S + +V CE+ C R
Sbjct: 181 RDVFYVSLSGTKVGRVIRYDMKKKEAKVIMDKLRLPNGLALSKNGSFVVTCESSTNICHR 240
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLV-- 180
+ G K+GT + F LPG PDNIR G +W+A+ + L TR+ + V
Sbjct: 241 IWVKGPKSGTNEVF-ATLPGSPDNIRRTPTGDFWVALHCKKNL----FTRAVLIHTWVGR 295
Query: 181 YMVDRFVVAVPHNLKNAG---AMSVTLAGE 207
+ ++ + + N G + V L+GE
Sbjct: 296 FFMNTMKMETVIHFMNGGKPHGIVVKLSGE 325
>AT2G41300.1 | chr2:17214312-17216292 REVERSE LENGTH=395
Length = 394
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 5 GGLVVADADIGLLKVSPDKAV-ELLTDEAEGVKFALTDGVDV-AGDGVIYFTDASHKHSL 62
G L D +G++KV P + E + DE EG K + +D+ + IYF D+S +
Sbjct: 145 GDLYFCDGYLGVMKVGPKGGLAEKVVDEVEGQKVMFANQMDIDEEEDAIYFNDSSDTYHF 204
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
+ L GR + +D T+ V+ L+F NG+A+S D ++ CE + R
Sbjct: 205 GDVFYAFLCGEKTGRAIRYDKKTKEAKVIMDRLHFPNGLALSIDGSFVLSCEVPTQLVHR 264
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGEGRYWIAISAGRTLQWDVLTRSPFVRKLV-- 180
Y G AGT D F LPG+ DNIR G +W+A+ + +T + P+V K
Sbjct: 265 YWAKGPNAGTRDIF-AKLPGYADNIRRTETGDFWVALHSKKTPFSRLSMIHPWVGKFFIK 323
Query: 181 -----YMVDRFVVAVPHNLKNAGAMSVTLAGE 207
+V F PH A++V L+G+
Sbjct: 324 TLKMELLVFLFEGGKPH------AVAVKLSGK 349
>AT1G74020.1 | chr1:27835289-27837277 REVERSE LENGTH=336
Length = 335
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Query: 5 GGLVVADADIGLLKVSPDKAVEL-LTDEAEGVKFALTDGVDV-AGDGVIYFTDASHKHSL 62
G L VADA +GL +SP + +TD +G F DG+DV GV+YFT S + S
Sbjct: 109 GDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSP 168
Query: 63 AEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMRRCSR 122
+ ++ + G+L +DPST+ TVL GL + G AVS D ++ + R
Sbjct: 169 IQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKR 228
Query: 123 YHINGDKAGTVDKFIGDLPGFPDNIRYDGE-GRYWIA 158
Y I G KAG+ + F + PDNI+ G G +W+A
Sbjct: 229 YWIKGPKAGSSEDFTNSVSN-PDNIKRIGSTGNFWVA 264
>AT1G74000.1 | chr1:27829266-27831401 REVERSE LENGTH=330
Length = 329
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 2 TADGGLVVADADIGLLKVSPDKA--VELLTDEAEGVKFALTDGVDV-AGDGVIYFTDASH 58
T G L VADA +GL V P + + + D G F DG+DV GV+YFT S
Sbjct: 108 TKTGDLYVADAALGL-HVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSS 166
Query: 59 KHSLAEFMVDVLEARPHGRLMSFDPSTRRTTVLARGLYFANGVAVSPDQDSLVFCETVMR 118
+ + V G+ +DPS + TVL GL + G AVS D ++ +
Sbjct: 167 TFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKS 226
Query: 119 RCSRYHINGDKAGTVDKFIGDLPGFPDNIRYDGE-GRYWIA 158
RY I G KAGT + F + PDNI+ G G +W+A
Sbjct: 227 NIKRYWIKGSKAGTSEDFTNSVSN-PDNIKRIGSTGNFWVA 266
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,582,439
Number of extensions: 230730
Number of successful extensions: 478
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 445
Number of HSP's successfully gapped: 15
Length of query: 255
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 159
Effective length of database: 8,474,633
Effective search space: 1347466647
Effective search space used: 1347466647
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)