BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0542900 Os10g0542900|AK070067
(261 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 284 4e-77
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 232 1e-61
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 228 3e-60
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 131 4e-31
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 129 2e-30
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 129 2e-30
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 128 3e-30
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 119 1e-27
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 119 1e-27
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 119 1e-27
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 117 5e-27
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 107 5e-24
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 93 1e-19
AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284 89 2e-18
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 175/240 (72%), Gaps = 15/240 (6%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
I+ + F+ ML +R+++ CPARGFYTY+AFI AA SFP FGT+G +A ++E+AAFFGQT
Sbjct: 90 ISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATR-KKEVAAFFGQT 148
Query: 96 SHETTGGTRGSSD-QFQWGYCFKEEINKATS-------------PPYYGRGPIQLTGQSN 141
SHETTGG + D + WGYCFK+E N A+ YYGRGP+QL+ N
Sbjct: 149 SHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYN 208
Query: 142 YQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTA 201
Y G A+G+DL+ NPDLV+ DAV++FK AIWFWMTAQ KPSCH VI G+W PS AD A
Sbjct: 209 YGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRA 268
Query: 202 AGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNFAS 261
AGR+PGYGVITNIINGG+ECG GQ+ DRIG+Y+RYC++ G G NLDCYNQR+F +
Sbjct: 269 AGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSFVN 328
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 157/240 (65%), Gaps = 16/240 (6%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+ + +++ + ++DN+ CPA+GFY Y+AF+ A SFP FG S G+ RRE+AAF Q
Sbjct: 42 VPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFG-SVGNFWTRRREVAAFLAQI 100
Query: 96 SHETTGGTRGSSD-QFQWGYCFKEEINKATS--------------PPYYGRGPIQLTGQS 140
SHETTGG + D + WG CFKEE++ ++ Y GRGPIQL+
Sbjct: 101 SHETTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLSWNY 160
Query: 141 NYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADT 200
NY AG ALG D + NP+LV+ ++V++FKTA+WFWMT Q KPSCH+V++ R+ P+ AD
Sbjct: 161 NYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPTKADR 220
Query: 201 AAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNFA 260
AA R GYG++TNIINGG+ECG+ + DR+GY++RY + G NLDC NQR F+
Sbjct: 221 AANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDCENQRPFS 280
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 228 bits (581), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 155/240 (64%), Gaps = 16/240 (6%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+ + ++N + ++DN+ CPA GFYTY++F+ A FP FG S GS R E+AAF Q
Sbjct: 34 VPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFG-SVGSPVTQRLEVAAFLAQI 92
Query: 96 SHETTGGTRGSSD-QFQWGYCFKEEINKATS--------------PPYYGRGPIQLTGQS 140
SHETTGG + D + WG CFKEE++ ++ Y GRGPIQL+
Sbjct: 93 SHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLSWNY 152
Query: 141 NYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADT 200
NY AG ALG D + NP+ VS ++V++F+TA+WFWMT Q KPSCHDV++G++ P+AAD
Sbjct: 153 NYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIGKYRPTAADL 212
Query: 201 AAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNFA 260
AA R G+G+ TNIINGG+ECG+ + DRIG+++RY + G NLDC NQR +A
Sbjct: 213 AANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLFKVATGPNLDCENQRPYA 272
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 41 FNSMLPNRDNSQCPARGFYTYDAFIAAANSFP--AFGTSGGSAELIRRELAAFFGQTSHE 98
F + R+ A GF+ Y +FI AA F FGT+GG + ++E+AAF G + +
Sbjct: 69 FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKL-MGQKEMAAFLGHVASK 127
Query: 99 TTGGT-RGSSDQFQWGYCFKEEINKATS---------------PPYYGRGPIQLTGQSNY 142
T+ G + WG C+ E++ S YYGRG + + NY
Sbjct: 128 TSCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYPCSPGAEYYGRGALPIYWNFNY 187
Query: 143 QAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTA-QGNKPSCHDVILGRWTPSAADTA 201
AAG AL DL+ +P+ + +A ++F+ AIW WMT + +PS HD+ +G W P+ DT
Sbjct: 188 GAAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTL 247
Query: 202 AGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLG-----AGYGSNLDCYNQ 256
+ R P +G N++ G CG G D + I +Y + D++G AG L C Q
Sbjct: 248 SKRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQ 307
Query: 257 RNF 259
+ F
Sbjct: 308 KPF 310
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 122/230 (53%), Gaps = 52/230 (22%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
IT A FNS++ ++ S CPA+GFYT AFIAAA SF A+ + +RE+AA Q
Sbjct: 92 ITPAFFNSIM-SKVGSGCPAKGFYTRQAFIAAAESFAAY-----KGTVAKREIAAMLAQF 145
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEINK------ATSPP------YYGRGPIQLTGQSNYQ 143
SHE+ GS +C+KEEI + +T+ P YYGRGPIQ+T NY
Sbjct: 146 SHES-----GS-------FCYKEEIARGRYCSPSTTYPCQPGKNYYGRGPIQITWNYNYG 193
Query: 144 AAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAG 203
AAG LGL L+ +PD+V+ V+F+ A+WFW + +P +L +
Sbjct: 194 AAGKFLGLPLLKDPDMVARSPTVAFQCAMWFW--NKNVRP-----VLSQ----------- 235
Query: 204 RVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253
G+G T INGG EC G+ A R+ +Y +C LG G+NL C
Sbjct: 236 ---GFGATTRRINGG-ECNGGRPAAVQSRVNHYLDFCKKLGVTPGTNLSC 281
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 125/244 (51%), Gaps = 26/244 (10%)
Query: 41 FNSMLPNRDNSQCPARGFYTYDAFIAAANSFP--AFGTSGGSAELIRRELAAFFGQTSHE 98
F ++ R++ A GF+ Y +FI AA + FGT+G + ++ E+AAF G +
Sbjct: 92 FENLFSKRNSPVAHAVGFWDYRSFITAAAEYQPLGFGTAGEKLQGMK-EVAAFLGHVGSK 150
Query: 99 TTGGT-RGSSDQFQWGYCFKEEIN----------KATSP-----PYYGRGPIQLTGQSNY 142
T+ G + WG C+ +E++ K T P Y+GRG + + NY
Sbjct: 151 TSCGYGVATGGPLAWGLCYNKEMSPDQLYCDDYYKLTYPCTPGVSYHGRGALPVYWNYNY 210
Query: 143 QAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTA-QGNKPSCHDVILGRWTPSAADTA 201
G AL +DL+ +P+ + +A ++F+ AIW WMT + + PS HDV +G+W P+ DTA
Sbjct: 211 GQTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTA 270
Query: 202 AGRVPGYGVITNIINGGIECGVG-QNDANVDRIGYYKRYCDMLG-----AGYGSNLDCYN 255
A R PG+G N++ G C G ND + + +Y Y D++G AG L C +
Sbjct: 271 AKRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGREEAGPHEKLSCAD 330
Query: 256 QRNF 259
Q F
Sbjct: 331 QEPF 334
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 117/233 (50%), Gaps = 55/233 (23%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+TQ FN+++ N+ + C + FYT D+F+ AAN+FP F S + RRE+A F
Sbjct: 72 VTQGFFNNII-NQAGNGCAGKRFYTRDSFVNAANTFPNFANS-----VTRREIATMFAHF 125
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEINKAT---------------SPPYYGRGPIQLTGQS 140
+HET +C+ EEIN AT Y+GRGPIQL+
Sbjct: 126 THETGH------------FCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNY 173
Query: 141 NYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADT 200
NY A G +LGLDL+ P+LV ++ V+F+T +WFWM + +P +L +
Sbjct: 174 NYGACGQSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSV--RP-----VLNQ-------- 218
Query: 201 AAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253
G+G IN G+EC G + A RIGYY+ YC LG G NL C
Sbjct: 219 ------GFGATIRAIN-GMECNGGNSGAVNARIGYYRDYCGQLGVDPGPNLSC 264
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 113/234 (48%), Gaps = 52/234 (22%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+TQ FN ++ ++ S C FY+ AF+ A +S+ FG G S + RRE+AAFF
Sbjct: 76 VTQEFFNGII-SQAASSCAGNRFYSRGAFLEALDSYSRFGRVG-STDDSRREIAAFFAHV 133
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEIN---------KATSPP------YYGRGPIQLTGQS 140
+HET +C+ EEI+ AT P YYGRGPIQL+
Sbjct: 134 THETGH------------FCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNF 181
Query: 141 NYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADT 200
NY AG A+G D + P+ V+TD V+SFKTA+W+W R P +
Sbjct: 182 NYGPAGTAIGFDGLNAPETVATDPVISFKTALWYWTN--------------RVQPVISQ- 226
Query: 201 AAGRVPGYGVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGAGYGSNLDC 253
G+G ING +EC G N A V R+ YY YC LG G+NL C
Sbjct: 227 ------GFGATIRAINGALECD-GANTATVQARVRYYTDYCRQLGVDPGNNLTC 273
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 112/230 (48%), Gaps = 45/230 (19%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+T FNS+L R + CP +GFYT+D F+AAANS+P+FG A + +RE+AAFF
Sbjct: 81 VTPDFFNSILNQRGD--CPGKGFYTHDTFMAAANSYPSFG-----ASISKREIAAFFAHV 133
Query: 96 SHET---------TGGTRGSSDQFQWGYC--FKEEINKATSPPYYGRGPIQLTGQSNYQA 144
+ ET G + +S + YC K E A YYGRG IQL+ NY
Sbjct: 134 AQETGFMCYIEEIDGPAKAASGE----YCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGL 189
Query: 145 AGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGR 204
G AL +L+ +P+ V+ D V++FKTA WFW T +
Sbjct: 190 CGKALDENLLASPEKVAQDQVLAFKTAFWFWTT---------------------NVRTSF 228
Query: 205 VPGYGVITNIINGGIECGVGQNDAN-VDRIGYYKRYCDMLGAGYGSNLDC 253
G+G +N EC G + A +RI Y++ YC LG G NL C
Sbjct: 229 KSGFGATIRAVN-SRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC 277
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 115/230 (50%), Gaps = 52/230 (22%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+T A F+ ++ N CPA+GFYT AFIAAA SF A+ + +RE+AA Q
Sbjct: 94 VTPAFFDGIMSKVGNG-CPAKGFYTRQAFIAAAQSFDAY-----KGTVAKREIAAMLAQF 147
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEI--NKATSPP----------YYGRGPIQLTGQSNYQ 143
SHE+ GS +C+KEEI K SP YYGRGPIQ+T NY
Sbjct: 148 SHES-----GS-------FCYKEEIARGKYCSPSTAYPCTPGKDYYGRGPIQITWNYNYG 195
Query: 144 AAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAG 203
AAG LGL L+ +PD+V+ V+F+ A+WFW +P +L +
Sbjct: 196 AAGKFLGLPLLTDPDMVARSPQVAFQCAMWFWNL--NVRP-----VLDQ----------- 237
Query: 204 RVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253
G+G T INGG EC + A R+ YY +C LG G+NL C
Sbjct: 238 ---GFGATTRKINGG-ECNGRRPAAVQSRVNYYLEFCRTLGITPGANLSC 283
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 122/234 (52%), Gaps = 57/234 (24%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+TQ FN+++ N+ + C + FYT D+FI A N+FP+F + + RRE+A F
Sbjct: 73 VTQIFFNNII-NQAGNGCAGKSFYTRDSFINATNTFPSFANT-----VTRREIATMFAHF 126
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEINKAT---------------SPPYYGRGPIQLTGQS 140
++ET +C+ EEIN A+ + Y+GRGP+ L+
Sbjct: 127 TYETGH------------FCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNF 174
Query: 141 NYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADT 200
NY A G +LGLDL+ P+LVS++ VV+F+TA+WFWM + +P +L +
Sbjct: 175 NYGACGQSLGLDLLRQPELVSSNPVVAFRTALWFWMKSV--RP-----VLNQ-------- 219
Query: 201 AAGRVPGYGVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGAGYGSNLDC 253
G+G I+ G +C G+N V+ RIGYY+ YC LG G+N+ C
Sbjct: 220 ------GFGATIRAIS-GFDCD-GRNLGGVNARIGYYRDYCGQLGLDPGANITC 265
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 114/230 (49%), Gaps = 52/230 (22%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
IT A+F+S++ ++ S C A+GFYTY+AFI A SF A+ ++ +RE+AA
Sbjct: 84 ITSALFDSIM-SKVESNCSAKGFYTYEAFITAFKSFGAY-----KGKVAKREIAAILAHF 137
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEIN------KATSPP------YYGRGPIQLTGQSNYQ 143
S+ GS +C+KEEI+ K+ P YYGRG +Q + Y
Sbjct: 138 SY-------GSKS-----FCYKEEISNERYCSKSKKYPCEPGKNYYGRGLLQSITWNEYY 185
Query: 144 AAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAG 203
AG LGL L+ +PDLVS V+FK A+WFW + +P+ +
Sbjct: 186 GAGKHLGLPLLKDPDLVSRSPEVAFKFAMWFW--NRNVRPALY----------------- 226
Query: 204 RVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253
G+G IT ++G ECG + D +++ Y +C+MLG LDC
Sbjct: 227 --LGFGEITKRVDGR-ECGNWRRDDTKNKVKQYIEFCEMLGVTPDQGLDC 273
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 102/233 (43%), Gaps = 55/233 (23%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+T A+F+ ++ + S C +GFYT +AFI A SF G + +RE+AA Q
Sbjct: 88 VTPALFHRLM-RKVGSNCTGKGFYTREAFITAVKSF-----EGYKGTVAKREIAAILAQF 141
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEINKAT------------SPPYYGRGPIQ-LTGQSNY 142
S+E+ +C+KEE+ T YYGRG +Q + Y
Sbjct: 142 SYESGN------------FCYKEEVTSETYCSSSKTYPCQSGKKYYGRGLLQSIKWNEFY 189
Query: 143 QAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAA 202
AG LGL L+ +PD+V+ V+FK A+WFW T G PS
Sbjct: 190 GEAGKYLGLPLLKDPDMVARSPEVAFKFAMWFWKTEVG--PSLR---------------- 231
Query: 203 GRVPGYGVITNIINGGIECG--VGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253
G+G T IN GIECG +A +RI Y C G G +L C
Sbjct: 232 ---LGFGATTMRIN-GIECGGMSWNAEAMQNRINQYLEICKWFGVNPGKDLYC 280
>AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284
Length = 283
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 55/219 (25%)
Query: 36 ITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQT 95
+TQ FN+++ N+ + C + F T D+FI AAN+FP F +S + RRE+A+ F
Sbjct: 34 VTQGFFNNII-NQAGNGCTRKRFNTRDSFIDAANNFPNFASS-----VTRREIASMFAHV 87
Query: 96 SHETTGGTRGSSDQFQWGYCFKEEINKATSPPYYGRG---------PIQLTGQSNYQAAG 146
+HET +C+ EEI K + GR P Q G S
Sbjct: 88 THET------------GHFCYIEEIKKRSR----GRCDENVEQRPCPSQSKGHSG--RGH 129
Query: 147 NALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVP 206
+LGLDL+ P+LV ++ V+F+ + FW+ + +P +L +
Sbjct: 130 QSLGLDLLRQPELVGSNPTVAFRKGLSFWINSV--RP-----VLNQ-------------- 168
Query: 207 GYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGA 245
G+G ING +EC G + A RIGYY+ YC LG
Sbjct: 169 GFGATIRAING-MECNGGNSGAVKARIGYYRDYCRQLGV 206
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,493,340
Number of extensions: 229591
Number of successful extensions: 484
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 451
Number of HSP's successfully gapped: 14
Length of query: 261
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 164
Effective length of database: 8,447,217
Effective search space: 1385343588
Effective search space used: 1385343588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)