BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0524300 Os10g0524300|AK063244
         (108 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62150.1  | chr5:24958325-24958633 FORWARD LENGTH=103           92   5e-20
AT4G25433.1  | chr4:13001463-13001795 REVERSE LENGTH=111           87   1e-18
AT3G52790.1  | chr3:19566004-19566333 REVERSE LENGTH=110           82   5e-17

>AT5G62150.1 | chr5:24958325-24958633 FORWARD LENGTH=103
          Length = 102

 Score = 92.4 bits (228), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 46/49 (93%)

Query: 54  PCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKITP 102
           PCEEIY+V EGETLH+I D+CGDP+I+E+NPH+HDPDDVFPGLV+KI P
Sbjct: 47  PCEEIYIVGEGETLHTIGDKCGDPFIVERNPHIHDPDDVFPGLVLKIAP 95



>AT4G25433.1 | chr4:13001463-13001795 REVERSE LENGTH=111
          Length = 110

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 46/47 (97%)

Query: 54  PCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKI 100
           PCEE+YVV EG+TLHSIS++CGDP+I+E+NPH+HDPDDVFPGL+IK+
Sbjct: 58  PCEELYVVGEGDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLLIKL 104



>AT3G52790.1 | chr3:19566004-19566333 REVERSE LENGTH=110
          Length = 109

 Score = 82.0 bits (201), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 44/48 (91%)

Query: 55  CEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKITP 102
           C+EIY V+EGETL +IS++CGDPYI+E NPH+HD DD+FPGL+I+ITP
Sbjct: 60  CDEIYEVKEGETLQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRITP 107



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.141    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,607,198
Number of extensions: 52292
Number of successful extensions: 92
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 3
Length of query: 108
Length of database: 11,106,569
Length adjustment: 77
Effective length of query: 31
Effective length of database: 8,995,537
Effective search space: 278861647
Effective search space used: 278861647
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)