BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0523700 Os10g0523700|AK099858
(408 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27820.1 | chr2:11856808-11858082 FORWARD LENGTH=425 239 2e-63
AT1G08250.1 | chr1:2588994-2590235 REVERSE LENGTH=414 238 4e-63
AT1G11790.1 | chr1:3981476-3984962 FORWARD LENGTH=393 221 4e-58
AT3G44720.1 | chr3:16271759-16273033 FORWARD LENGTH=425 221 7e-58
AT3G07630.1 | chr3:2435457-2437530 FORWARD LENGTH=382 202 2e-52
AT5G22630.1 | chr5:7524645-7525922 FORWARD LENGTH=426 201 8e-52
>AT2G27820.1 | chr2:11856808-11858082 FORWARD LENGTH=425
Length = 424
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 201/341 (58%), Gaps = 22/341 (6%)
Query: 67 NGSGRKKAAAQHINGNDRIH----LSVSTGGAGGQDGFGLRVAFQGAPGAYSEFAAKTAL 122
NG+G N N I LS+S G LRVA+QG PGAYSE AA A
Sbjct: 82 NGAGVSDLNLVPFNNNQSIQSKKPLSISDLSPAPMHGSNLRVAYQGVPGAYSEAAAGKAY 141
Query: 123 PGCDTVPCXXXXXXXXXXXXXXXXXXILPVESTMEGTALRNYDLLLRHDLVVVQEINLFV 182
P C +PC +LPVE+++ G+ RNYDLLLRH L +V E+ L V
Sbjct: 142 PNCQAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPV 201
Query: 183 HYCLLAMPGVRAAEVRRVISHPMALAHCGRALARLGVD--REPVEDTAGAVEMLRSNRML 240
H+CL+A+PGVR + RVISHP LA C L +LG++ RE V+DTAGA E + +N +
Sbjct: 202 HHCLIALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIAANNIR 261
Query: 241 DTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVTLPMDADAKTSMVVAHR 300
DTAAIAS RAA++YGL++L G+QD++ NVTRF++L++ P+ D KTS+V AH
Sbjct: 262 DTAAIASARAAEIYGLEILEDGIQDDASNVTRFVMLAR--EPIIPRTDRPFKTSIVFAHE 319
Query: 301 GGSMMVVLKVLSAFSSRNINLTKLEVINNNDXXXXXXXXXXXHPVMILDTSARGAPTLRA 360
G+ V+ KVLSAF+ RNI+LTK+E N++ P+ ++D + G T +
Sbjct: 320 KGT-CVLFKVLSAFAFRNISLTKIESRPNHNV-----------PIRLVDEANVG--TAKH 365
Query: 361 FPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLGCYAAD 401
F ++ Y+D E + + R +A+ E++ F F+RVLG Y D
Sbjct: 366 FEYMFYIDFEASMAESRAQNALSEVQEFTSFLRVLGSYPMD 406
>AT1G08250.1 | chr1:2588994-2590235 REVERSE LENGTH=414
Length = 413
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 210/364 (57%), Gaps = 24/364 (6%)
Query: 40 INGVNGHSSKKSPNGKAQINGDGKKGVNGSGRKKAAAQHINGNDRIHLSVSTGGAGGQDG 99
++ +NGH+S A++ G + S QH N LS++ G
Sbjct: 60 VDHLNGHNS-----AAARVPGMNLVPIEKSDSNPLVPQH-RHNPLKPLSMTDLSPAPMHG 113
Query: 100 FGLRVAFQGAPGAYSEFAAKTALPGCDTVPCXXXXXXXXXXXXXXXXXXILPVESTMEGT 159
LRVA+QG PGAYSE AA A P C +PC +LPVE+++ G+
Sbjct: 114 SNLRVAYQGVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWIADRAVLPVENSLGGS 173
Query: 160 ALRNYDLLLRHDLVVVQEINLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARLGV 219
RNYDLLLRH L +V E+ L VH+CLLA+PGVR + RVISHP LA C L +LG+
Sbjct: 174 IHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQGLAQCEHTLTKLGL 233
Query: 220 D--REPVEDTAGAVEMLRSNRMLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLS 277
+ RE V+DTAGA E + SN + DTAAIAS RAA++YGL++L G+QD+ NVTRF++L+
Sbjct: 234 NVAREAVDDTAGAAEFIASNNLRDTAAIASARAAEIYGLEILEDGIQDDVSNVTRFVMLA 293
Query: 278 KPPSPVTLPMDADAKTSMVVAHRGGSMMVVLKVLSAFSSRNINLTKLEVINNNDXXXXXX 337
+ P+ D KTS+V AH G+ V+ KVLSAF+ R+I+LTK+E N++
Sbjct: 294 R--EPIIPRTDRPFKTSIVFAHEKGT-SVLFKVLSAFAFRDISLTKIESRPNHN------ 344
Query: 338 XXXXXHPVMILDTSARGAPTLRAFPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLGC 397
P+ ++D + G T + F ++ YVD E + + R +A+ E++ F F+RVLG
Sbjct: 345 -----RPIRVVDDANVG--TAKHFEYMFYVDFEASMAEARAQNALAEVQEFTSFLRVLGS 397
Query: 398 YAAD 401
Y D
Sbjct: 398 YPMD 401
>AT1G11790.1 | chr1:3981476-3984962 FORWARD LENGTH=393
Length = 392
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 181/305 (59%), Gaps = 18/305 (5%)
Query: 98 DGFGLRVAFQGAPGAYSEFAAKTALPGCDTVPCXXXXXXXXXXXXXXXXXXILPVESTME 157
D +R++FQG PGAYSE AA A P C+TVPC +LP+E+++
Sbjct: 102 DDSKVRISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVG 161
Query: 158 GTALRNYDLLLRHDLVVVQEINLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARL 217
G+ RNYDLLLRH L +VQE++L V++CLL +PGV+ +++ V+SHP AL C +L L
Sbjct: 162 GSIHRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNL 221
Query: 218 GVDREPVEDTAGAVEMLRSNRMLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLS 277
G+ R +DTA A + + S+ +D AIAS RAA++YGLD+LA +QD+ NVTRFL+L+
Sbjct: 222 GIQRISAKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILA 281
Query: 278 KPPS-PVTLPMDADAKTSMVVAHRGGSMMVVLKVLSAFSSRNINLTKLEVINNNDXXXXX 336
+ P P T D KTS+V + G V+ K L+ F+ R+INL+K+E
Sbjct: 282 REPMIPRT---DRPYKTSIVFSLEEGP-GVLFKALAVFALRSINLSKIE----------- 326
Query: 337 XXXXXXHPVMILDTSARGAPTLRAFPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLG 396
P+ ++D S G+ + F ++ Y+D E + D R A+ ++ FA F+R+LG
Sbjct: 327 SRPQRRRPLRVVDGSNNGSA--KYFDYLFYIDFEASMADTRAQHALGHLQEFASFIRILG 384
Query: 397 CYAAD 401
CY D
Sbjct: 385 CYPMD 389
>AT3G44720.1 | chr3:16271759-16273033 FORWARD LENGTH=425
Length = 424
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 208/376 (55%), Gaps = 38/376 (10%)
Query: 37 AAKINGVNGHSSKKSPNGKAQINGDGKKGVNGSGRKKAAAQHINGNDRIHLSVSTGGAGG 96
A KI VNGH+ NG + G V + K A AQ L+++
Sbjct: 76 ADKIAAVNGHT-----NGSVNL---GLVAVESTNGKLAPAQP--------LTITDLSPAP 119
Query: 97 QDGFGLRVAFQGAPGAYSEFAAKTALPGCDTVPCXXXXXXXXXXXXXXXXXXILPVESTM 156
G LRVA+QG PGAYSE AA A P CD +PC +LPVE+++
Sbjct: 120 LHGSSLRVAYQGVPGAYSEAAAGKAYPNCDAIPCDQFDVAFQAVELWIADRAVLPVENSL 179
Query: 157 EGTALRNYDLLLRHDLVVVQEINLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALAR 216
G+ RNYDLLLRH L +V E+ + VH+CLLA+PGVR V RVISHP ALA +L
Sbjct: 180 GGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCVSRVISHPQALAQTEHSLDV 239
Query: 217 LG--VDREPVEDTAGAVEMLRSNRMLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFL 274
L RE DTA A E + +N + DTAA+AS RAA+LY L +LA G+QD+ NVTRFL
Sbjct: 240 LTPHAAREAFHDTAAAAEYISANDLHDTAAVASARAAELYNLQILADGIQDDPGNVTRFL 299
Query: 275 LLSKPPSPVTLPMDADAKTSMVVA---HRGGSMMVVLKVLSAFSSRNINLTKLEVINNND 331
+L++ P+ D KTS+V A H+G S V+ KVLSAF+ R+I+LTK+E +++
Sbjct: 300 MLAR--EPIIPRTDRPFKTSIVFAAQEHKGTS--VLFKVLSAFAFRDISLTKIESRPHHN 355
Query: 332 XXXXXXXXXXXHPVMILDTSARGAPTLRAFPHVLYVDCEGASHDPRVLDAIKEIERFAVF 391
P+ ++ + G T + F ++ YVD E + +PR +A+ E++ + F
Sbjct: 356 -----------RPLRVVGDGSFG--TSKNFEYMFYVDFEASMAEPRAQNALAEVQEYTSF 402
Query: 392 VRVLGCYAADSNVYDL 407
+RVLG Y D + +
Sbjct: 403 LRVLGSYPMDMTPWSM 418
>AT3G07630.1 | chr3:2435457-2437530 FORWARD LENGTH=382
Length = 381
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/307 (39%), Positives = 178/307 (57%), Gaps = 21/307 (6%)
Query: 98 DGFGLRVAFQGAPGAYSEFAAKTALPGCDTVPCXXXXXXXXXXXXXXXXXXILPVESTME 157
+G +RVA+QG GAYSE AA+ A P C+ VPC +LP+E+++
Sbjct: 95 NGSRVRVAYQGVRGAYSESAAEKAYPNCEAVPCEEFDTAFEAVERWLVDRAVLPIENSLG 154
Query: 158 GTALRNYDLLLRHDLVVVQEINLFVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARL 217
G+ RNYDLLLRH+L +V E+ L V +CLLA GV ++RRV+SHP ALA C L +L
Sbjct: 155 GSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHGVNIEDLRRVLSHPQALAQCENTLTKL 214
Query: 218 GVDREPVEDTAGAVEMLRSNRMLDTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLS 277
G+ RE V+DTAGA + + + D AA+AS +AA +YGL+++A +QD+ NVTRFL+L+
Sbjct: 215 GLVREAVDDTAGAAKQIAFENLNDAAAVASEKAAKIYGLNIVAKDIQDDCDNVTRFLMLA 274
Query: 278 KPPSPVTLPMDADAKTSMVVAHRGGSMMVVLKVLSAFSSRNINLTKLEVINNNDXXXXXX 337
+ P+ + KTS+V + G V+ K L+ F+ R INLTK+E
Sbjct: 275 R--EPIIPGTNRLFKTSIVFSLEEGP-GVLFKALAVFALRQINLTKIE-----------S 320
Query: 338 XXXXXHPVMILDTSARGAPTLRAFPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLGC 397
HP+ R + L+ F ++ YVD E + D +A++ +E FA F+RVLG
Sbjct: 321 RPLRKHPL-------RASGGLKYFDYLFYVDFEASMADEVAQNALRHLEEFATFLRVLGS 373
Query: 398 YAADSNV 404
Y D+ +
Sbjct: 374 YPVDTTM 380
>AT5G22630.1 | chr5:7524645-7525922 FORWARD LENGTH=426
Length = 425
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 185/320 (57%), Gaps = 22/320 (6%)
Query: 87 LSVSTGGAGGQDGFGLRVAFQGAPGAYSEFAAKTALPGCDTVPCXXXXXXXXXXXXXXXX 146
L+++ G LRVA+QG PGAYSE AA A P + +PC
Sbjct: 111 LTITDLSPAPSHGSTLRVAYQGVPGAYSEAAAGKAYPNSEAIPCDQFDVAFQAVELWIAD 170
Query: 147 XXILPVESTMEGTALRNYDLLLRHDLVVVQEINLFVHYCLLAMPGVRAAEVRRVISHPMA 206
+LPVE+++ G+ RNYDLLLRH L +V E+ + VH+CLLA+PGVR + RVISHP A
Sbjct: 171 RAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCITRVISHPQA 230
Query: 207 LAHCGRALARLGVDR--EPVEDTAGAVEMLRSNRMLDTAAIASPRAADLYGLDVLAHGLQ 264
LA +L +L E DTA A E + +N + DTAA+AS RAA+LYGL +LA G+Q
Sbjct: 231 LAQTEGSLNKLTPKAAIEAFHDTAAAAEYIAANNLHDTAAVASARAAELYGLQILADGIQ 290
Query: 265 DESWNVTRFLLLSKPPSPVTLPMDADAKTSMVVA---HRGGSMMVVLKVLSAFSSRNINL 321
D++ NVTRFL+L++ P+ D KTS+V A H+G S V+ KVLSAF+ RNI+L
Sbjct: 291 DDAGNVTRFLMLAR--DPIIPRTDRPFKTSIVFAAQEHKGTS--VLFKVLSAFAFRNISL 346
Query: 322 TKLEVINNNDXXXXXXXXXXXHPVMILDTSARGAPTLRAFPHVLYVDCEGASHDPRVLDA 381
TK+E + + PV ++ G T + F + YVD E + + R +A
Sbjct: 347 TKIESRPHQNC-----------PVRVVGDENVG--TSKHFEYTFYVDFEASMAEARAQNA 393
Query: 382 IKEIERFAVFVRVLGCYAAD 401
+ E++ + F+RVLG Y D
Sbjct: 394 LAEVQEYTSFLRVLGSYPMD 413
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,208,408
Number of extensions: 272608
Number of successful extensions: 783
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 759
Number of HSP's successfully gapped: 6
Length of query: 408
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 307
Effective length of database: 8,337,553
Effective search space: 2559628771
Effective search space used: 2559628771
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)