BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0521900 Os10g0521900|AK061038
(338 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07250.1 | chr5:2274437-2275935 REVERSE LENGTH=347 231 4e-61
AT1G63120.1 | chr1:23409054-23410725 REVERSE LENGTH=318 228 3e-60
AT2G29050.1 | chr2:12478245-12480121 FORWARD LENGTH=390 219 2e-57
AT1G12750.1 | chr1:4345100-4346688 REVERSE LENGTH=308 211 3e-55
AT3G53780.2 | chr3:19924729-19926648 REVERSE LENGTH=395 211 4e-55
AT4G23070.1 | chr4:12090690-12092077 REVERSE LENGTH=314 192 2e-49
AT1G77860.1 | chr1:29282643-29284458 REVERSE LENGTH=352 145 3e-35
AT1G52580.1 | chr1:19587637-19588958 FORWARD LENGTH=310 135 3e-32
>AT5G07250.1 | chr5:2274437-2275935 REVERSE LENGTH=347
Length = 346
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/252 (47%), Positives = 143/252 (56%), Gaps = 1/252 (0%)
Query: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
FL R SF+PL NPL GPSS TL+K+GAL W KVV + +GWRL+TCIWLHAGV+HL ANM
Sbjct: 95 FLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANM 154
Query: 147 LSLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXE 206
LSLV IG+RLEQQFG++RIG+IY FIRNSI E
Sbjct: 155 LSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSE 214
Query: 207 LFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYG 266
LFTNWTIY+NK PHVDNFAH RP +
Sbjct: 215 LFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFK 274
Query: 267 WMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYL 326
W+ R +P KY YQ++L ++ VL + GF V L MLFRG N N+ C WCHYL
Sbjct: 275 WLAREHMPQGTPL-RYKYKTYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYL 333
Query: 327 SCIPTSRWTCGN 338
C+PTS W C +
Sbjct: 334 RCVPTSSWRCDD 345
>AT1G63120.1 | chr1:23409054-23410725 REVERSE LENGTH=318
Length = 317
Score = 228 bits (582), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/250 (48%), Positives = 147/250 (58%), Gaps = 3/250 (1%)
Query: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
FL RFSFQPL ENPL GPSS+TL+KMGAL W KVVHEHQGWRL++C+WLHAG++HLL NM
Sbjct: 71 FLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNM 130
Query: 147 LSLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXE 206
LSL+ IG+RLEQQFG++R+G+IY F++ SI E
Sbjct: 131 LSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGALFGLLGAMLSE 190
Query: 207 LFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYG 266
L TNWTIY NK P VDNFAH +RP YG
Sbjct: 191 LLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYG 250
Query: 267 WMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYL 326
W ++ T +KY YQ++L V+ VL V+G V L MLF+G N N+ C WCHYL
Sbjct: 251 WEASR---TNTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLFKGENGNKHCKWCHYL 307
Query: 327 SCIPTSRWTC 336
SC PTS+WTC
Sbjct: 308 SCFPTSKWTC 317
>AT2G29050.1 | chr2:12478245-12480121 FORWARD LENGTH=390
Length = 389
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 141/256 (55%), Gaps = 10/256 (3%)
Query: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
FL RF+FQP+ ENPLLGPSS TL+KMGAL VVH+H+ WRL TCIWLHAGV H+LANM
Sbjct: 90 FLGRFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANM 149
Query: 147 LSLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXE 206
LSL+ IG+RLEQ+FG++RIG++Y F R I E
Sbjct: 150 LSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSE 209
Query: 207 LFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYG 266
L TNWTIY NK PHVDNFAH +RP YG
Sbjct: 210 LLTNWTIYANKFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYG 269
Query: 267 WMQR------YVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERC 320
+ + Y PS+ K+ YQ++L + VL + G+ GL +L RG + N+ C
Sbjct: 270 YFNQRNNPRGYAAPSA----KSKHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHC 325
Query: 321 HWCHYLSCIPTSRWTC 336
WCHYLSCIPTS W+C
Sbjct: 326 SWCHYLSCIPTSLWSC 341
>AT1G12750.1 | chr1:4345100-4346688 REVERSE LENGTH=308
Length = 307
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 140/253 (55%), Gaps = 6/253 (2%)
Query: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
LRRFSFQPL ENP LGPSS+TL+K+GAL W KVV ++ WRL+T +WLHAG++HL+ NM
Sbjct: 58 LLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNM 117
Query: 147 LSLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXE 206
+++ G+RLEQQFG++RIG+IY F++ SI E
Sbjct: 118 FDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSE 177
Query: 207 LFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYG 266
L TNWTIY +K P VDNFAH M+P G
Sbjct: 178 LLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSG 237
Query: 267 WMQRYVLPSSVKYTSK---KYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWC 323
W + +S +Y ++ KY Q++L VA+VL V G VGL MLF G N N+ C WC
Sbjct: 238 WEE---FRNSSQYGARARSKYNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWC 294
Query: 324 HYLSCIPTSRWTC 336
H L C PTS+W+C
Sbjct: 295 HRLDCYPTSKWSC 307
>AT3G53780.2 | chr3:19924729-19926648 REVERSE LENGTH=395
Length = 394
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 140/250 (56%), Gaps = 3/250 (1%)
Query: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
FL RFSFQ ENPLLGPSS TLQ MG L KVV +GWRL++C WLH GVVHLL NM
Sbjct: 100 FLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNM 159
Query: 147 LSLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXE 206
L+L+ IG+R+E++FG++RIG++Y F+R++I E
Sbjct: 160 LTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSE 219
Query: 207 LFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYG 266
+F NWTIY+NK P VDNFAH +RPHYG
Sbjct: 220 IFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYG 279
Query: 267 WMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYL 326
W+ + P + + ++ YQ IL ++ ++ V GF VGL LF V+ NE C WCHYL
Sbjct: 280 WINQRNGPGAKPH---RFKIYQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYL 336
Query: 327 SCIPTSRWTC 336
SC+PTS+W+C
Sbjct: 337 SCVPTSKWSC 346
>AT4G23070.1 | chr4:12090690-12092077 REVERSE LENGTH=314
Length = 313
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 127/249 (51%)
Query: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
FL RFSF+ NPLLGPSS+TL+KMGAL W K+VH+ Q WRL+TC+WLHAGV+HLLANM
Sbjct: 65 FLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVWRLLTCMWLHAGVIHLLANM 124
Query: 147 LSLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXE 206
+ IG+RLEQQFG++R+G IY F+ ++I E
Sbjct: 125 CCVAYIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLEDAISVGASSALFGLLGAMLSE 184
Query: 207 LFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYG 266
L NWT Y NK P VDNFAH + P +
Sbjct: 185 LLINWTTYDNKGVAIVMLLVIVGVNLGLGTLPPVDNFAHIGGFFGGFLLGFLLLIHPQFE 244
Query: 267 WMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYL 326
W + V KY Q +L VAS++ V GF GL +LFRG + N C WCH L
Sbjct: 245 WEENQVSLMPGTIVKPKYNTCQLVLCIVASIVFVAGFTSGLVILFRGDSLNRYCKWCHKL 304
Query: 327 SCIPTSRWT 335
S S+WT
Sbjct: 305 SYSSKSQWT 313
>AT1G77860.1 | chr1:29282643-29284458 REVERSE LENGTH=352
Length = 351
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 88 LRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANML 147
L RFSFQ LSENP+LGPS++TL+ MG L W + H+ WR++T WLH+G+ HL N+
Sbjct: 84 LGRFSFQSLSENPMLGPSASTLEHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLG 143
Query: 148 SLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNSIXXXXXXXXXXXXXXXXXEL 207
SL+ +G+ +EQQFG +RI +IY F+RN L
Sbjct: 144 SLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVLFVRNIPSISSGAAFFGLIGAMLSAL 203
Query: 208 FTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHYGW 267
NW +Y +K P +DNFA+ +P
Sbjct: 204 AKNWNLYNSKISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQ 263
Query: 268 M----QRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFR-GVNANERCHW 322
M + + + +++ + +L + +L G G+ + GVN N CHW
Sbjct: 264 MPPSHKGKLFEDDMNRSTRLKEQFDRPVLRIICLLVFCGILAGVLLAACWGVNLNRHCHW 323
Query: 323 CHYLSCIPTSRWTCGN 338
C Y+ C+PT +W+C +
Sbjct: 324 CRYVDCVPTKKWSCSD 339
>AT1G52580.1 | chr1:19587637-19588958 FORWARD LENGTH=310
Length = 309
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 88 LRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANML 147
L R SFQP+ EN LLGPS TL+K+GAL ++V E + WRL++CIWLH G +HL+ANM+
Sbjct: 69 LGRLSFQPIKENMLLGPSIPTLRKLGAL-ERRLVEEGERWRLISCIWLHGGFLHLMANMI 127
Query: 148 SLVLIGLRLEQQFGYMRIGIIYXXXXXXXXXXXXXFIRNS--IXXXXXXXXXXXXXXXXX 205
SL+ IG+RLEQ+FG+MRIG +Y +
Sbjct: 128 SLMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLTDSQGERVSVGASGALFGLLGAMLS 187
Query: 206 ELFTNWTIYTNKXXXXXXXXXXXXXXXXXXXXPHVDNFAHXXXXXXXXXXXXXXXMRPHY 265
EL TNWTIY NK P VDN AH +RP Y
Sbjct: 188 ELITNWTIYENKCTALMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQY 247
Query: 266 GWMQ-RYVLPS-SVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFR 312
G++ +Y+ P +K+ K+ YQ I + + + GF G + L R
Sbjct: 248 GYVNPKYIPPGYDMKHKKSKHKCYQHIFRFTSLAILLAGFIAGYTKLLR 296
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.329 0.140 0.481
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,186,752
Number of extensions: 121220
Number of successful extensions: 394
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 375
Number of HSP's successfully gapped: 9
Length of query: 338
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 239
Effective length of database: 8,392,385
Effective search space: 2005780015
Effective search space used: 2005780015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 112 (47.8 bits)