BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0518200 Os10g0518200|J065209A10
(134 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135 205 5e-54
AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135 176 4e-45
AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141 174 1e-44
AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136 130 2e-31
AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133 126 3e-30
AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918 77 2e-15
AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918 73 3e-14
AT1G60660.1 | chr1:22342589-22342954 REVERSE LENGTH=122 71 2e-13
AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450 60 5e-10
AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450 54 2e-08
AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212 54 3e-08
>AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135
Length = 134
Score = 205 bits (522), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 112/134 (83%)
Query: 1 MAGEKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFE 60
M+ ++KV FEEV+ HN TKDCWLII+GKVYDVT FMD+HPGGDEVLL+ TGKDATNDFE
Sbjct: 1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60
Query: 61 DIGHSESAREMMEKYLIGEIDASTIPVKRTHVTPQQAPGNPDKGDDMLIKILQFLVPILI 120
D+GHS++AR+MM+KY IGEID+S++P RT+V PQQ N DK + +IKILQFLVPILI
Sbjct: 61 DVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPEFIIKILQFLVPILI 120
Query: 121 LGLAFAIRQYTKSE 134
LGLA +R YTK +
Sbjct: 121 LGLALVVRHYTKKD 134
>AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135
Length = 134
Score = 176 bits (445), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 102/133 (76%)
Query: 1 MAGEKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFE 60
M E K+F EV+ HN DCW++I GKVY+VT F+++HPGGD+VLL+ TGKDAT+DFE
Sbjct: 1 MGDEAKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFE 60
Query: 61 DIGHSESAREMMEKYLIGEIDASTIPVKRTHVTPQQAPGNPDKGDDMLIKILQFLVPILI 120
D+GHSESAREMME+Y +GEID +TIP K + P+Q N DK + +IK+LQFLVP+ I
Sbjct: 61 DVGHSESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAI 120
Query: 121 LGLAFAIRQYTKS 133
LGLA IR YTKS
Sbjct: 121 LGLAVGIRIYTKS 133
>AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141
Length = 140
Score = 174 bits (441), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 104/136 (76%), Gaps = 2/136 (1%)
Query: 1 MAGEKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFE 60
M G+ KVF EV+ H+ KDCW++I GKVYDVT F+D+HPGGDEV+L TGKDAT+DFE
Sbjct: 1 MGGDGKVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFE 60
Query: 61 DIGHSESAREMMEKYLIGEIDASTIPVKRTHVTP--QQAPGNPDKGDDMLIKILQFLVPI 118
D+GHS +A+ M+++Y +G+ID +T+PVK V P +A DK D +IK+LQFLVP+
Sbjct: 61 DVGHSSTAKAMLDEYYVGDIDTATVPVKAKFVPPTSTKAVATQDKSSDFVIKLLQFLVPL 120
Query: 119 LILGLAFAIRQYTKSE 134
LILGLAF IR YTK++
Sbjct: 121 LILGLAFGIRYYTKTK 136
>AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136
Length = 135
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
Query: 6 KVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFEDIGHS 65
K++ EE A HN DCW++I GKVYDV+S+MDEHPGGD+VLLAV GKDAT+DFED GHS
Sbjct: 6 KLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFEDAGHS 65
Query: 66 ESAREMMEKYLIGEIDASTIPVKRTHVTPQQAPGNPDKGDDMLIKILQ-----FLVPILI 120
+ ARE+MEKY IGE+D S++P P+ D+ D + K+ ++VP+ I
Sbjct: 66 KDARELMEKYFIGELDESSLP-----EIPELKIYKKDQPQDSVQKLFDLTKQYWVVPVSI 120
Query: 121 LGLAFAI 127
+ ++ A+
Sbjct: 121 ITISVAV 127
>AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133
Length = 132
Score = 126 bits (317), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 94/127 (74%), Gaps = 2/127 (1%)
Query: 7 VFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFEDIGHSE 66
+ F +VA H DCW++I GKVYD+++FMDEHPGGD VLLAVTGKDA+ DFED+ HS+
Sbjct: 4 LISFHDVAKHKCKNDCWILIHGKVYDISTFMDEHPGGDNVLLAVTGKDASIDFEDVNHSK 63
Query: 67 SAREMMEKYLIGEIDASTIPVKRTHVTP--QQAPGNPDKGDDMLIKILQFLVPILILGLA 124
A+E+M+KY IG++D ST+PV + ++ P +++ ++ K+L +L+P+LILG+A
Sbjct: 64 DAKELMKKYCIGDVDQSTVPVTQQYIPPWEKESTAAETTKEESGKKLLIYLIPLLILGVA 123
Query: 125 FAIRQYT 131
FA+R Y
Sbjct: 124 FALRFYN 130
>AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918
Length = 917
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 1 MAGEKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFE 60
M K++ EV HN CW+I+ G +YD T F+ +HPGG + +L G D T +FE
Sbjct: 538 MNTTAKMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFE 597
Query: 61 DIGHSESAREMMEKYLIGEI 80
I HS+ A++M+E Y IGE+
Sbjct: 598 AI-HSDKAKKMLEDYRIGEL 616
>AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918
Length = 917
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 1 MAGEKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFE 60
M K++ EV HN W+I+ G +YD T F+ +HPGG + +L G D T +FE
Sbjct: 541 MNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFE 600
Query: 61 DIGHSESAREMMEKYLIGEI 80
I HS+ A++++E Y IGE+
Sbjct: 601 AI-HSDKAKKLLEDYRIGEL 619
>AT1G60660.1 | chr1:22342589-22342954 REVERSE LENGTH=122
Length = 121
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 6 KVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFEDIGHS 65
K + EVA HN DCW+II KVYD+TS+++EHPGGD +L G D+T+ F H+
Sbjct: 47 KSYSKSEVAVHNKRNDCWIIIKDKVYDITSYVEEHPGGD-AILDHAGDDSTDGFFGPQHA 105
Query: 66 ESAREMMEKYLIGEI 80
+M+E + IGE+
Sbjct: 106 TRVFDMIEDFYIGEL 120
>AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450
Length = 449
Score = 59.7 bits (143), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 4 EKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDF 59
EKK E++ HN + D W+ I GKVY+V+ ++ HPGGD V+L + G+D T+ F
Sbjct: 6 EKKYITNEDLKKHNKSGDLWIAIQGKVYNVSDWIKTHPGGDTVILNLVGQDVTDAF 61
>AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450
Length = 449
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 4 EKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDF 59
+K+ E++ HN D W+ I GKVYDV+ ++ HPGG+ +L + G+D T+ F
Sbjct: 6 KKRYVTSEDLKKHNKPGDLWISIQGKVYDVSDWVKSHPGGEAAILNLAGQDVTDAF 61
>AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212
Length = 211
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 3 GEKKVFGFEEVAGHNVTKDCWLIIAGKVYDVTSFMDEHPGGDEVLLAVTGKDATNDFEDI 62
K++ +EV H W ++ G+VY+++ +M+ HPGG ++L+ G+D T F
Sbjct: 124 SNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVGRDGTLLFNKY 183
Query: 63 GHSESAREMMEKYLIGEIDASTI 85
+ ++EK L+G +D + +
Sbjct: 184 HAWVNVDILLEKCLVGVLDDTKV 206
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.138 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,011,009
Number of extensions: 120718
Number of successful extensions: 262
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 257
Number of HSP's successfully gapped: 11
Length of query: 134
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 46
Effective length of database: 8,693,961
Effective search space: 399922206
Effective search space used: 399922206
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 106 (45.4 bits)