BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0517500 Os10g0517500|AK100465
(464 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64660.1 | chr1:24028977-24030537 FORWARD LENGTH=442 511 e-145
AT3G57050.1 | chr3:21111939-21114521 REVERSE LENGTH=465 136 2e-32
AT3G01120.1 | chr3:39234-41865 REVERSE LENGTH=564 132 3e-31
AT1G33320.1 | chr1:12081009-12083462 FORWARD LENGTH=413 130 1e-30
>AT1G64660.1 | chr1:24028977-24030537 FORWARD LENGTH=442
Length = 441
Score = 511 bits (1315), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/388 (63%), Positives = 290/388 (74%), Gaps = 1/388 (0%)
Query: 55 HEFGEHGGVNMSIEASATFTVMEPDTMRRLFSGELGPERGDLYIYSRHFNPTVLALGRQM 114
HEFGEHGGVNMSIEASATFTVMEPDTMRR+F+GELGP+ D Y+YSRHFNPTVL L RQM
Sbjct: 52 HEFGEHGGVNMSIEASATFTVMEPDTMRRMFTGELGPDN-DFYVYSRHFNPTVLNLSRQM 110
Query: 115 AALEGTEAAYCTASGMSAISSVLMQLVGAGGHVVASRCLYGGTHALLSRFLPRASGVRAT 174
AALEGT+AAYCT+SGMSAISSV++QL +GGHVVA+ LYGGTHALLS FLPR + +
Sbjct: 111 AALEGTQAAYCTSSGMSAISSVMLQLCSSGGHVVAASTLYGGTHALLSHFLPRTCNITTS 170
Query: 175 FXXXXXXXXXXXXXXPGETRVVYVETMSNPTLAVADIPMLARVAHDAGAKLVVDNTFTPM 234
F G T+V+Y E+++NPTL VADIP L+R+AH+ G +VVDNTF PM
Sbjct: 171 FVDITDHGAVANAIVEGRTQVLYFESVANPTLTVADIPELSRMAHEKGVTVVVDNTFAPM 230
Query: 235 VVSPARLGADVVVHSVSKFXXXXXXXXXXXXXXXXSLVNAMMDLQEGALMLLGPTMNAKV 294
V+SPA+LGADVVVHS+SKF +LV MMDL+ G+LMLLGPTMNAKV
Sbjct: 231 VLSPAKLGADVVVHSISKFISGGADIIAGAVCGSENLVKEMMDLRGGSLMLLGPTMNAKV 290
Query: 295 AFELSERLPHLPLRMQEHSRRAAEYASRMRRLGLRVAYPGLPDHPHHARLLAIANPGYGA 354
AFELSER+PHL LRM+EHS RA YA RMR LG++V YPGL HP H + N YG
Sbjct: 291 AFELSERIPHLGLRMREHSHRAQVYAERMRDLGMKVIYPGLETHPQHKLFKGMVNRDYGY 350
Query: 355 GGMLCVDMGTEDRANRLMHHLQNTTRFGLMAVSLGYYETLMXXXXXXXXXEMPPEDRARA 414
GG+L +DM TE++AN+LM +LQN T+FG MAVSLGYYETLM E+ P + A
Sbjct: 351 GGLLSIDMETEEKANKLMAYLQNATQFGFMAVSLGYYETLMSCSGSSTSSELDPSQKEAA 410
Query: 415 GISPGLVRMSVGYNGTLEQRWAQFERAL 442
GISPGLVRMSVGY GTLEQ+W QFE+A
Sbjct: 411 GISPGLVRMSVGYVGTLEQKWTQFEKAF 438
>AT3G57050.1 | chr3:21111939-21114521 REVERSE LENGTH=465
Length = 464
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 169/349 (48%), Gaps = 48/349 (13%)
Query: 97 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVLMQLVGAGGHVVASRCLYGG 156
Y Y+R NPT AL +A L+ + A+C SGM+A+S+V L+ G +VA +YGG
Sbjct: 125 YDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGG 183
Query: 157 THALLSRFLPRASGVRATFXXXXXXXXXXXXXXPGETRVVYVETMSNPTLAVADIPMLAR 216
+ LLS+ +PR SGV P +T++V++E+ +NP ++DI ++
Sbjct: 184 SDRLLSQVVPR-SGVVVKRVNTTKLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISE 241
Query: 217 VAHDAGAKLVVDNTF-TPMVVSPARLGADVVVHSVSKFXXXXXXXXXXXXXXXXSLVNAM 275
+AH GA ++VDN+ +P++ P LGAD+V+HS +KF +
Sbjct: 242 MAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKF------------------IAGH 283
Query: 276 MDLQEGALMLLGPTMNAKVAFELSER---------------LPHLPLRM---QEHSRRAA 317
D+ G L + G + +V F + + + LR+ QE++R+ A
Sbjct: 284 SDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIA 343
Query: 318 EYASRMRRLGLRVAYPGLPDHPHHARLLAIANPGYGAGGMLCVDMGTEDRANRLMHHLQN 377
Y S R+ +V Y GLPDHP H + A GAG + G+ L HL
Sbjct: 344 MYLSSHPRVK-KVYYAGLPDHPGHHLHFSQAK---GAGSVFSFITGSV----ALSKHLVE 395
Query: 378 TTRFGLMAVSLGYYETLMXXXXXXXXXEMPPEDRARAGISPGLVRMSVG 426
TT++ +AVS G ++L+ +P E R G++ LVR+S G
Sbjct: 396 TTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG 444
>AT3G01120.1 | chr3:39234-41865 REVERSE LENGTH=564
Length = 563
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 16/343 (4%)
Query: 88 ELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVLMQLVGAGGHV 147
+ +R + Y R+ NPT + L +++ALEG E+ ASGM A + +L+ LV AGGH+
Sbjct: 215 DFKEKRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVMLLALVPAGGHI 274
Query: 148 VASRCLYGGTHALLSRFLPRASGVRATFXXXXXXXXXXXXXXPGETRVVYVETMSNPTLA 207
V + Y T + FLP+ G+ T + + + E+ +NP L
Sbjct: 275 VTTTDCYRKTRIFMENFLPKL-GITVTVIDPADIAGLEAAVNEFKVSLFFTESPTNPFLR 333
Query: 208 VADIPMLARVAHDAGAKLVVDNTF-TPMVVSPARLGADVVVHSVSKFXXXXXXXXXXXXX 266
DI +++++ H G + +D TF TP+ LGAD+VVHS +K+
Sbjct: 334 CVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCIC 393
Query: 267 XXXSLVNAMMDLQEGALMLLGPTMNAKVAFELSERLPHLPLRMQEHSR---RAAEYASRM 323
LV+ + +L +LG T+N A+ + + L LR+Q+ + R AE
Sbjct: 394 GSLKLVSEIRNLHH----VLGGTLNPNAAYLIIRGMKTLHLRVQQQNSTAFRMAEILEAH 449
Query: 324 RRLGLRVAYPGLPDHPHHARLLAIANPGYGAGGMLCVDMGTEDRANRLMHHLQNTTRFGL 383
++ V YPGLP HP H L G+G +D E ++ +
Sbjct: 450 PKVS-HVYYPGLPSHPEH-ELAKRQMTGFGGVVSFEIDGDIETTIK-----FVDSLKIPY 502
Query: 384 MAVSLGYYETLMXXXXXXXXXEMPPEDRARAGISPGLVRMSVG 426
+A S G E+++ ++P E+R + GI LVR S G
Sbjct: 503 IAPSFGGCESIVDQPAIMSYWDLPQEERLKYGIKDNLVRFSFG 545
>AT1G33320.1 | chr1:12081009-12083462 FORWARD LENGTH=413
Length = 412
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 17/343 (4%)
Query: 88 ELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVLMQLVGAGGHV 147
+ +R DLY Y+R+ NPT +AL +++ LEG E+ ASGM A + +L+ LV GH+
Sbjct: 65 DFKEKRIDLYEYARYGNPTTMALEEKISVLEGAESTLVMASGMYASNVMLLALVPTNGHI 124
Query: 148 VASRCLYGGTHALLSRFLPRASGVRATFXXXXXXXXXXXXXXPGETRVVYVETMSNPTLA 207
VA++ Y T + FL + G+ TF E + + E+ +NP L
Sbjct: 125 VATKDCYKETRIFMENFLTKL-GITVTFIDSDDIAGLQTLVNNHEVSLFFTESPTNPFLR 183
Query: 208 VADIPMLARVAHDAGAKLVVDNTF-TPMVVSPARLGADVVVHSVSKFXXXXXXXXXXXXX 266
DI +++++ H G + +D T TP+ LGAD+V HS +K+
Sbjct: 184 CVDIKLVSKICHRRGTLVCIDATIATPINQKTLALGADLVHHSATKYIGGHNDFLAGSIS 243
Query: 267 XXXSLVNAMMDLQEGALMLLGPTMNAKVAFELSERLPHLPLRMQEHSRRAAEYASRMR-- 324
LV+ + +L + LLG T+N A+ L + + LR+++ + + A +
Sbjct: 244 GSMELVSKIRNLHK----LLGGTLNPNAAYLLIRGMKTMHLRVRQQNSTGMKMAQVLEAH 299
Query: 325 -RLGLRVAYPGLPDHPHHARLLAIANPGYGAGGMLCVDMGTEDRANRLMHHLQNTTRFGL 383
++ RV Y GLP HP H L G GG++ ++ D + + +
Sbjct: 300 PKVS-RVYYLGLPSHPEH---LIAKRQMTGIGGLISFEI---DGDLKTTIKFIDALKIPY 352
Query: 384 MAVSLGYYETLMXXXXXXXXXEMPPEDRARAGISPGLVRMSVG 426
+A S G E+L+ ++P E+R + G LVR S G
Sbjct: 353 LAASFGGCESLV-DQLATGIWDIPREERLKDGFQDNLVRFSFG 394
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,592,106
Number of extensions: 256186
Number of successful extensions: 473
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 456
Number of HSP's successfully gapped: 4
Length of query: 464
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 362
Effective length of database: 8,310,137
Effective search space: 3008269594
Effective search space used: 3008269594
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)