BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0516100 Os10g0516100|AK120480
         (164 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32470.1  | chr1:11739479-11740246 REVERSE LENGTH=167          238   9e-64
AT2G35370.1  | chr2:14891239-14892050 FORWARD LENGTH=166          232   7e-62
AT2G35120.1  | chr2:14805913-14807274 REVERSE LENGTH=157          192   5e-50

>AT1G32470.1 | chr1:11739479-11740246 REVERSE LENGTH=167
          Length = 166

 Score =  238 bits (608), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 123/164 (75%), Positives = 144/164 (87%), Gaps = 1/164 (0%)

Query: 1   MALRLWASSAANALKISCSGAT-RAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATI 59
           MALR+WASS ANALK+S S +     PA+SISR FS+VL+GLKY++SHEWVK++GSVATI
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 60  GITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSE 119
           GITDHAQ HLGEVVFVELPEA + VS+  +FG VESVKATS+I SPISGEV+EVN KL+E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 120 TPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
           +PGLINSSPYEDGWMIKVKPSSP+EL+AL+ P +YTK CEEEDA
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDA 164



>AT2G35370.1 | chr2:14891239-14892050 FORWARD LENGTH=166
          Length = 165

 Score =  232 bits (591), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 117/163 (71%), Positives = 138/163 (84%)

Query: 1   MALRLWASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATIG 60
           MALR+WASS ANALK+S S +      +S SR FSTVL+GLKY++SHEWVK++GSVATIG
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSET 120
           IT HAQ HLGEVVFVELPE    VS+  +FG VESVKATS+I SPISGE++EVN KL+E+
Sbjct: 61  ITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTES 120

Query: 121 PGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
           PGLINSSPYEDGWMIKVKPSSP+EL++L+ P +YTK CEEEDA
Sbjct: 121 PGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDA 163



>AT2G35120.1 | chr2:14805913-14807274 REVERSE LENGTH=157
          Length = 156

 Score =  192 bits (489), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 101/164 (61%), Positives = 122/164 (74%), Gaps = 11/164 (6%)

Query: 1   MALRL-WASSAANALKISCSGATRAAPAYSISRYFSTVLDGLKYSSSHEWVKNDGSVATI 59
           MA RL WAS  A+ L+IS   A R         + S VL  LKY+ SHEWVK DG+ AT 
Sbjct: 1   MACRLFWASRVASHLRISV--AQRG--------FSSVVLKDLKYADSHEWVKIDGNKATF 50

Query: 60  GITDHAQGHLGEVVFVELPEAGAKVSQGGAFGNVESVKATSDINSPISGEVVEVNDKLSE 119
           GITDHAQ HLG+VV+VELP+ G  VSQG +FG VESVKATSDINSP+SG+VVEVN++L+E
Sbjct: 51  GITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTE 110

Query: 120 TPGLINSSPYEDGWMIKVKPSSPSELDALLDPAKYTKHCEEEDA 163
           +PGL+NSSPYE GW+IKV+ S   E + L+D  KY+K CEEEDA
Sbjct: 111 SPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDA 154



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.309    0.126    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,716,517
Number of extensions: 148300
Number of successful extensions: 323
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 322
Number of HSP's successfully gapped: 3
Length of query: 164
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 73
Effective length of database: 8,611,713
Effective search space: 628655049
Effective search space used: 628655049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 108 (46.2 bits)