BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0516000 Os10g0516000|Os10g0516000
(1339 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576 199 7e-51
AT1G43760.1 | chr1:16528880-16531065 REVERSE LENGTH=627 158 2e-38
ATMG00310.1 | chrM:90883-91347 REVERSE LENGTH=155 127 3e-29
AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485 122 1e-27
ATMG01250.1 | chrM:310514-310882 FORWARD LENGTH=123 81 3e-15
AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747 81 3e-15
AT4G20520.1 | chr4:11045912-11047716 FORWARD LENGTH=377 76 1e-13
AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366 73 1e-12
AT1G40390.1 | chr1:15432576-15434674 REVERSE LENGTH=427 72 2e-12
AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344 71 4e-12
AT1G10000.1 | chr1:3263877-3264788 REVERSE LENGTH=304 69 2e-11
AT3G25720.1 | chr3:9380234-9381405 FORWARD LENGTH=283 55 2e-07
>AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576
Length = 575
Score = 199 bits (507), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 148/584 (25%), Positives = 254/584 (43%), Gaps = 37/584 (6%)
Query: 771 AIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGFREF 830
A+P Y M+CF +P ++C+++ + +AD WW + K MHWK+W LS K GG+GF++
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 831 TTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELL 890
FN A+LG+Q WR+L+ P+SL ++V K RYF S A PSF W+S+ +E+L
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 891 AKGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDA--------TVSCLMNEDARC 942
+G R VG+G+ I I+ W+ + P VS L++E R
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 943 WDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQ 1002
W D+I LFP K I ++ D +W + G Y+V+S Y + Q
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGY-------WVLTQ 234
Query: 1003 SNSGRGMASRLLESQKD--WKGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDG 1060
+ R + E + ++ +WK K++ LW+ L L RH+
Sbjct: 235 IINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESA 294
Query: 1061 CVFCNR-DDTVEHVFLFCPFAAQIWE------EIKGKCAVKLGRNGFSTMRQWIFDFLKR 1113
C+ C +TV H+ C FA W + G+ A + N + W+F+ L
Sbjct: 295 CIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLY-----WVFN-LGN 348
Query: 1114 GSSH---ANTLLAVTFWHIWEARNNTKNNNGTVHPQRVVIKILSYVDMI-LKHNTKTVDG 1169
G+ A+ L+ W +W+ RN + Q V+ + ++ ++ ++
Sbjct: 349 GNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGT 408
Query: 1170 QRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVV 1229
+ N + RW+PPP N+DA + G+G ++R+ G+ + + +
Sbjct: 409 KPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLK 468
Query: 1230 XXXXXXXXXXXXXXXXXKEEGLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLAS 1289
+++ SD +I I + + I+D+++L S
Sbjct: 469 SVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLI-EILNNDEIWPSLKPTIQDLQRLLS 527
Query: 1290 TFVLCSFMHVNRLSNLAAHSLARNAE--LSTCTVYRSVIPDYIR 1331
F F+ + R N A +AR + L+ S++P + R
Sbjct: 528 QFTEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPSWAR 571
>AT1G43760.1 | chr1:16528880-16531065 REVERSE LENGTH=627
Length = 626
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 189/404 (46%), Gaps = 15/404 (3%)
Query: 95 LCCGDFNEVLCLDEHLGMRERSEPH--MQHFRSCLDDCGLIDLGFVGPKFTWSNKQDANS 152
+ GDF+++ +H + + S P ++ F++CL D L+D+ G +TWSN QD N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNP 281
Query: 153 NSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLSRRNHGQRRIPIQQGFRFE 212
+ +LDRA+ANG++ F + ++ SDH I L N +R ++ FR+
Sbjct: 282 IIR-KLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIIL--ENLPKRS---KKCFRYF 335
Query: 213 AAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKME 272
+ + + +W + + L+ K ++ FG+++ K +
Sbjct: 336 SFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEAL 395
Query: 273 RKLKSLRQSPV---NDVVIQEEKLIEQQLCELFEKEEIMARQRSRVDWLREGDRNTXXXX 329
L+S++ + +D + + E + ++ E RQ+SR+ WL++GD NT
Sbjct: 396 DSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFH 455
Query: 330 XXXXXXXXTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEP----CDSMEEVLDAI 385
N IK L DD R + +K M +Y +L S+ DS++ + D
Sbjct: 456 KVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIH 515
Query: 386 PNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVR 445
P + D + L +++EI A+F M KAPGPD F A F+ W ++++ AV+
Sbjct: 516 PFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVK 575
Query: 446 GFLLGEEIPEGLCDSVVVLIPKVNNASHLSKFRPISLCNVLYKI 489
F + + + + LIPKV LS FRP+S C V+YKI
Sbjct: 576 EFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKI 619
>ATMG00310.1 | chrM:90883-91347 REVERSE LENGTH=155
Length = 154
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Query: 771 AIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFL-GGMGFRE 829
A+P Y MSCFR+ +C+K+ + + + WW + K+K+ W +W L K GG+GFR+
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 830 FTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSFWEAAQPKSPSFTWRSLLFGREL 889
FNQA+L +Q +R++ P +L SR+L+ RYFP+SS E + PS+ WRS++ GREL
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
Query: 890 LAKGVRWGVGDGKTIKIFSDNWI 912
L++G+ +GDG K++ D WI
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWI 144
>AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485
Length = 484
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 194/493 (39%), Gaps = 23/493 (4%)
Query: 857 LKGRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFR 916
+K RYF + S +A K S+ W SLL G LL KG R +GDG+ I+I DN +
Sbjct: 1 MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60
Query: 917 PQLVTTLSPFPTDATVSCLMNEDARC--WDGDLIRSLFPVDIAKEILQIPISRHGDADFA 974
P+ + T + + T++ L WD I I +I +++ D
Sbjct: 61 PRPLNTEETY-KEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKI 119
Query: 975 SWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKG-LWKINAPGKMK 1033
W ++ G Y+VRS Y L + S A D K +W + K+K
Sbjct: 120 IWNYNTTGEYTVRSGYWLLTHDP-------STNIPAINPPHGSIDLKTRIWNLPIMPKLK 172
Query: 1034 ITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRD-DTVEHVFLFCPFAAQIWEEIKGKCA 1092
LWRA + LAT +L R + C C+R+ +++ H CPFA W
Sbjct: 173 HFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLI 232
Query: 1093 -VKLGRNGFSTMRQWIFDFLKRGS-SHANTLLAV-TFWHIWEARNNTKNNNGTVHPQRVV 1149
+L N F I +F++ + S + LL V W IW+ARNN N P + V
Sbjct: 233 RNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTV 292
Query: 1150 I----KILSYVDMILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTMG 1205
+ + +++ H KT R I W+ PPA+ N DA
Sbjct: 293 LSAKAETHDWLNATQSHK-KTPSPTRQIAENKI-EWRNPPATYVKCNFDAGFDVQKLEAT 350
Query: 1206 VGALIRDNTGKCLVACSEMISDVVXXXXXXXXXXXXXXXXXKEEGLEHIVMASDCLTVIR 1265
G +IR++ G + S ++ G + M DC T+I
Sbjct: 351 GGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLIN 410
Query: 1266 RIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLAR-NAELSTCTVYRS 1324
I S + +EDI A+ F F + R N AH LA+ ST
Sbjct: 411 LINGISF-HSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTYSTFYSGSG 469
Query: 1325 VIPDYIRDILCDD 1337
+P ++ C+D
Sbjct: 470 SLPIWLDRYFCND 482
>ATMG01250.1 | chrM:310514-310882 FORWARD LENGTH=123
Length = 122
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/67 (56%), Positives = 47/67 (70%)
Query: 591 INGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAGELQGIKNGRHGPPISH 650
ING V PSRG+RQGDP+SPYLF+LCTE LS L + + G L GI+ + P I+H
Sbjct: 14 INGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRINH 73
Query: 651 LLFADDS 657
LLFADD+
Sbjct: 74 LLFADDT 80
>AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747
Length = 746
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 149/376 (39%), Gaps = 67/376 (17%)
Query: 722 YLGMPTEIGLATTNFFKFLPERIWKRVNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFR 781
YLG+P TT+ + L E+I R+ WT R LS AG ++ +V ++ N+ MS FR
Sbjct: 27 YLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFR 86
Query: 782 IPVSICEKMKTCIADHWWGFEDGKKKMHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQ 841
+P + +++ + + W + K +WS + TPK GG+G R N+
Sbjct: 87 LPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKG----- 141
Query: 842 CWRLLTDPDSLCSRVLKGRYFPNSSFWE-AAQPKSPSFTWRSLLFGRELLAKGVRWGVGD 900
SFW + S+ W+ +L R L + V+ + +
Sbjct: 142 ------------------------SFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHN 177
Query: 901 GKTIKIFSDNW--------IPGFRP--QLVTTLSPFPTDATVSCLMNEDARCWDGDLIRS 950
G + DNW + G R + TL +A V N R D +
Sbjct: 178 GSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVV----NHRPRRHRHDTL-- 231
Query: 951 LFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRG-M 1009
L D+ E+ RH GL S + F N+
Sbjct: 232 LRIEDVIAEV------RHQ------------GLTSGEDTVRWKGNGDIFKPCFNTKETWA 273
Query: 1010 ASRLLESQKDW-KGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-D 1067
A+R + + +W KG+W +A K + W A L TG ++ + + CV C+
Sbjct: 274 ATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLV 333
Query: 1068 DTVEHVFLFCPFAAQI 1083
+T +H+F CP++A++
Sbjct: 334 ETRDHLFFTCPYSAEV 349
>AT4G20520.1 | chr4:11045912-11047716 FORWARD LENGTH=377
Length = 376
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 54/93 (58%)
Query: 494 LANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAY 553
+ RLKP + +++ Q++F+PGR+ TD+ + E +H++R++ + LK+D+ KAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 554 DRVEWAYLSGCLSKLGFSQDWINTVMRCVSSVR 586
DR+ W YL L GF + W+ + R R
Sbjct: 61 DRIRWDYLEDTLISAGFPEVWLPEIARSTFGAR 93
>AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366
Length = 365
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 112/302 (37%), Gaps = 12/302 (3%)
Query: 1021 KGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCV-FCNRDDTVEHVFLFCPF 1079
+ +WK++ K+K LWR LAT +LR R+I + C C ++T+ H+ CP+
Sbjct: 35 QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPY 94
Query: 1080 AAQIWEEIKGKCAVKLG-RNGFSTMRQWIFDFLKRGSSHA--NTLLAVTFWHIWEARNNT 1136
+W + G + F + K ++++ L W +W++RN
Sbjct: 95 TQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRLWKSRNVF 154
Query: 1137 KNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQRGGNTQAI-------PRWQPPPASVW 1189
P K + L N T + T I +W PPP
Sbjct: 155 LFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQWNPPPEGWV 214
Query: 1190 MINSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVXXXXXXXXXXXXXXXXXKEE 1249
N D+ S G IR+ G ++ + +
Sbjct: 215 KCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAEALGFLHALQVIWAH 274
Query: 1250 GLEHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHS 1309
GL ++ SD +++ I +G D S +G +I DI+ CS VNR N AA +
Sbjct: 275 GLRYVWFESDSKSLVTLIN-NGEDHSLLGTLIYDIRHWMLKLPYCSLEFVNRERNSAADA 333
Query: 1310 LA 1311
LA
Sbjct: 334 LA 335
>AT1G40390.1 | chr1:15432576-15434674 REVERSE LENGTH=427
Length = 426
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 21/252 (8%)
Query: 76 RHFFWNLLRRLHDQW---RGPWLCCGDFNEVLCLDEHLGMRER--SEPHMQHFRSCLDDC 130
R W+ + RL PWL GDFN++ + EH + S ++ ++C+ D
Sbjct: 101 RRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDS 160
Query: 131 GLIDLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAIS 190
L+DL G +TWSN Q N + +LDRA+ NG + F + SDH A
Sbjct: 161 DLVDLPCRGVLYTWSNHQQDNPILR-KLDRAIVNGCWLATFPTASAIFDPPSDSDHAACM 219
Query: 191 IDLSRRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVA 250
+ L+ ++ + F++ + D+ + +W+ A V S + +
Sbjct: 220 VILNNSPPLSKK----KSFKYFSFLSTHPDFISSILAAWQKEIA-------VGSFMFSLG 268
Query: 251 VSLKDWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEKLIEQQLCELFEKEEIMAR 310
LK+ KA G RR ++ +L S +D + + E + + E +
Sbjct: 269 ELLKEAKKACRGLNRRGFSNIQAQL----MSNPSDFLFRAEHVARKNWNFFAAALESFYK 324
Query: 311 QRSRVDWLREGD 322
Q+SR+ WL+EGD
Sbjct: 325 QKSRIKWLKEGD 336
>AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344
Length = 343
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 121/327 (37%), Gaps = 14/327 (4%)
Query: 1023 LWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVF-CNRDDTVEHVFLFCPFAA 1081
+WK+ K+K LW+ LATG L+RRHI + C C D+T +H+F C +A
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 1082 QIWEEIKGKCAVKLGRNGF---STMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTKN 1138
Q+W G +L G + M + L L W +W++RN
Sbjct: 78 QVW-RASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVF 136
Query: 1139 NNGTVHPQRVVIKILSYVDMILKHNT------KTVDGQRGGN-TQAIPRWQPPPASVWMI 1191
++ Q + + + V NT + V R T A +WQ PP++
Sbjct: 137 QQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKY 196
Query: 1192 NSDAAIFSSSRTMGVGALIRDNTGKCLVACSEMISDVVXXXXXXXXXXXXXXXXXKEEGL 1251
N D A +R G L+RD G + + + S +G
Sbjct: 197 NYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQGY 256
Query: 1252 EHIVMASDCLTVIRRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLA 1311
++ D V + + + G I + + F F V R +N A LA
Sbjct: 257 RKVIFEGDSKQV-EELMNNEKLNFGRFNWIREGRFWQKRFEEAVFKWVPRTNNQPADILA 315
Query: 1312 RNA-ELSTCTVYRSVIPDYIRDILCDD 1337
++ + + + +P +I L D
Sbjct: 316 KHHLQPNQSFKFHYYVPAFITSTLYYD 342
>AT1G10000.1 | chr1:3263877-3264788 REVERSE LENGTH=304
Length = 303
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 1031 KMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRDDTVEHVFLFCPFAAQIWEEIKGK 1090
K+K+ LW+AA L G QL RRHI ST C C +T H+ C FAAQ+W
Sbjct: 3 KIKLFLWKAAAGALPVGAQLVRRHISSTWDCARCGAPETSTHMLFHCDFAAQVWN----L 58
Query: 1091 CAVKLGRNGFSTMRQWIFDFLKRG------SSHANTLLAVTFWHIWEARNNTKNNNG 1141
++LG T + LK+ H TL WHIW+ARN N
Sbjct: 59 APLQLGHIPIGTPILEALNLLKKTIVLPPVGIHTATLFPWICWHIWKARNQLIFQNS 115
>AT3G25720.1 | chr3:9380234-9381405 FORWARD LENGTH=283
Length = 282
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 819 PKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPN------SSFWEAAQ 872
PK GG+G R F+ +N + + WRL + SL + + S FW + +
Sbjct: 21 PKAEGGLGLRWFSEWNTTLNLKLVWRLFSGGGSLWVDWHRYHHLQGLGDASVSKFWTSQE 80
Query: 873 PKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIPGFRPQLV 920
S S+ W+ LL R L + +R +G+G T + ++DNW P F P L+
Sbjct: 81 LVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTP-FGPLLI 127
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 30,636,049
Number of extensions: 1334064
Number of successful extensions: 2792
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 2770
Number of HSP's successfully gapped: 12
Length of query: 1339
Length of database: 11,106,569
Length adjustment: 111
Effective length of query: 1228
Effective length of database: 8,063,393
Effective search space: 9901846604
Effective search space used: 9901846604
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 118 (50.1 bits)