BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0508500 Os10g0508500|Os10g0508500
         (1244 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60740.1  | chr3:22447385-22453325 REVERSE LENGTH=1255        1362   0.0  

>AT3G60740.1 | chr3:22447385-22453325 REVERSE LENGTH=1255
          Length = 1254

 Score = 1362 bits (3526), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 688/1243 (55%), Positives = 877/1243 (70%), Gaps = 61/1243 (4%)

Query: 46   HDSKEVVLRRYFIQEWEIVSDILRRIVDAGGVAEPADVQRIRSIMDKYQEEGQLLEPYLE 105
            HDSKE VL+RYF+QEW++V  +L  IV  G V +P  V +IRSIMDKYQE+GQL+EPYLE
Sbjct: 29   HDSKERVLQRYFLQEWKLVKSLLDDIVSNGRVVDPTSVHKIRSIMDKYQEQGQLVEPYLE 88

Query: 106  SIISPLMLLVRSKTMELGACTDELLDIIKPLCIIIYTLVTVCGYKSVIKFFPHQVSDLEP 165
            SI+SPLM ++RSKT++L A  DE+L+IIKP+ IIIY LVTVCGYK+VIKFFPHQVSDLE 
Sbjct: 89   SIVSPLMFIIRSKTVDLEAKPDEILEIIKPISIIIYALVTVCGYKAVIKFFPHQVSDLEL 148

Query: 166  AVALLEECHKMSSATALRQESTGEMETKCXXXXXXXXXXXXPFDISSVDTSIATADHVDG 225
            AV LLE+CH  +S +ALRQESTGEME KC            PFDISSVDTSIA       
Sbjct: 149  AVLLLEKCHSTNSVSALRQESTGEMEAKCVTLLWLSILVLVPFDISSVDTSIADDKTFGV 208

Query: 226  PETVPLVTRILDICKDYLCSSGPMRRMSGLLLARLLTRPDMPKVFSSFMEWAQRILLSVT 285
             +  PLV +IL  CKDYLCS+GPMRR+SGLLL++LLTRPDM K FSSF EW   +L    
Sbjct: 209  DDLAPLVLKILGFCKDYLCSAGPMRRISGLLLSKLLTRPDMGKAFSSFFEWTYEVLSCKE 268

Query: 286  DDFVDQFRSIGIVEALASIFKIGNRKVLCDAVSGIWNDCSVVMKTNIASRSSLLRKFLVK 345
            D   + FR +G++EAL++IFK  +RKVL D +  + ND +V+ K+N A++SSLLRK+L+K
Sbjct: 269  DSVTNHFRLLGVMEALSAIFKTASRKVLLDVLPIVLNDVTVLSKSNAAAKSSLLRKYLIK 328

Query: 346  LAQRVALISLPPRSPSWRYQSISSSLGANLXXXXXXXXXXXXXXKQVNIDQTDTSSLEED 405
            L QR+ L+ LP RSPSWRY + ++SL  N+                +   ++     +ED
Sbjct: 329  LTQRIGLVCLPHRSPSWRYVAQTASLSENMSTSSSQRLAPDHTVTAILQPESLDDQEDED 388

Query: 406  MDVPEIVEEIIDLLLTGLRDSDTIVRWSAAKGVGRITARLTPALSEEVLSSILQLFSPGE 465
            MDVPEI+EEII++LL+GLRD+DT+VRWSAAKG+GR+T+RLT  LS+EVLSS+L+LFSPGE
Sbjct: 389  MDVPEILEEIIEMLLSGLRDTDTVVRWSAAKGIGRVTSRLTSVLSDEVLSSVLELFSPGE 448

Query: 466  GDGSWHXXXXXXXXXXXXXXXXPSSFPDVIPVIIKALHYDVRRGPHSIGSHV-------- 517
            GDGSWH                P SFP V+PVI+KALHYDVRRGPHS+GSHV        
Sbjct: 449  GDGSWHGGCLALAELARRGLLLPRSFPLVVPVIVKALHYDVRRGPHSVGSHVRDAAAYVC 508

Query: 518  ---------------------------------NCRRAASAAFQENVGRQGNFPHGIDIV 544
                                             NCRRAA+AAFQENVGRQGN+PHGIDIV
Sbjct: 509  WAFGRAYSHKDMKNVLDQLAPDLLIVGSFDREVNCRRAAAAAFQENVGRQGNYPHGIDIV 568

Query: 545  NAADYFALASRSNSYLNVAVFVAQYKEYLHPFAEELLCNKISHWERSLRELAAQALSMLV 604
            + ADYF+L+SR NSYL VAV +AQY+ YL+PF +ELL NKI HW++SLRELAA+AL+ LV
Sbjct: 569  SIADYFSLSSRVNSYLQVAVSIAQYEGYLYPFVDELLYNKICHWDKSLRELAAEALAPLV 628

Query: 605  QYDMNYFAGYALEKLVPCTLSSDLCTRHGATLAAGEIALKLYQLGFTFTTDMQKALSGIV 664
            +Y+  +FA Y LEKL+PCTLS+DLC RHGATLAAGE+ L L+Q G+  + D QK ++GIV
Sbjct: 629  KYEPKHFANYVLEKLIPCTLSTDLCMRHGATLAAGEVVLALHQCGYVLSADSQKRMAGIV 688

Query: 665  PAIEKARLYRGKGGEIMRSAVSRFIACISMSGISLNEKTKRSLLETLNENLRHPNAQIQC 724
            P+IEKARLYRGKGGEIMR AVSRFI CIS+S ++L E+T+R LL+TL ENLRHPN+QIQ 
Sbjct: 689  PSIEKARLYRGKGGEIMRLAVSRFIECISLSHVTLAERTERILLDTLTENLRHPNSQIQN 748

Query: 725  AAVDALKHFIPTYLVSSGEKTANGIITKYLTLLDDPNVXXXXXXXXXXXTLPYEFLVLKW 784
            AAV A+K  + +YLV + +K+ + +I K+L  L DPNV            LPYE L  KW
Sbjct: 749  AAVSAVKQLVQSYLVGNDKKSVD-LILKHLKHLTDPNVAVRRGSALALGVLPYELLTAKW 807

Query: 785  MPVISKLCSSCTIEDKPDDPDAEARVNSVRGLILVCETLTASVEHSSSFGD-SMYSYIKD 843
              ++ KLCS+C IE  P+D DAEARVN+V+GL  VCETLT          D S++  IK 
Sbjct: 808  KDIVLKLCSACKIEVNPEDRDAEARVNAVKGLTSVCETLTQKRASDPGNDDLSLFLLIKT 867

Query: 844  KVMQALFRALDDYAVDNRGDVGSWVREAAMDALERCTFILCKRDNIAVKITPVAEHESKS 903
            +VM  L +ALDDY+VDNRGDVGSWVREAA+  LE+CT+ILCK+         +  +    
Sbjct: 868  EVMDTLLKALDDYSVDNRGDVGSWVREAAVHGLEKCTYILCKK---------METYSEGD 918

Query: 904  IDIDTNAVNTRCQLFDSSIAQDLVAGIAKQAVEKIDKIREIAVKTLKRILYNEELFVPSI 963
             + DT++      LFDS++A  L+ G+ KQ VEK+DK+RE A K L+RILY++ + VP +
Sbjct: 919  YNDDTSS------LFDSNLATRLIGGMLKQGVEKMDKLRETAAKVLQRILYHKSVSVPHV 972

Query: 964  PYRELLEQIIPNSADLEWAVPAVSYPRFVKLLQVSCYSKPVLSGLVISTGGLQESLRKAS 1023
            PYRE LE+I+PN A+L+WAVPA S+PRFV+LL++ CYSK V+SGLVIS GGLQ+SLRKAS
Sbjct: 973  PYREKLEEILPNKANLQWAVPAFSFPRFVQLLKLRCYSKEVMSGLVISIGGLQDSLRKAS 1032

Query: 1024 TSALVDYLQDSDINTNDEGKNREYLLSCDLLWVLEHYQKCDRVVTPTLKTVETLLSKKVF 1083
              AL++Y+++ +     E ++RE  L  D+LW+L+ Y+KCDRV+ P L+T+E L S K+F
Sbjct: 1033 LVALLEYMREGEAKDPKEQQSRESALGDDILWILQEYKKCDRVMVPCLQTIEILFSSKIF 1092

Query: 1084 LREGH--CEFYSGLIKSLGPELKGSKDFAKLSAGLSILGYISSQSDGNGSTAFSQLLTFL 1141
            L +      FY+G++ SL  EL+ SKDF KL AGL+ILGYI+S S    + AFSQLL+FL
Sbjct: 1093 LNQESYTFSFYAGVMDSLAIELRASKDFTKLKAGLAILGYIASVSHFISTKAFSQLLSFL 1152

Query: 1142 GHRYPKIRKAAADQVYLVLLQNDSLIAAENMEKAQEVIAETCWEGDVEEARRKRSELNEM 1201
            GHRYP IRKAAA+QVYL LLQN  L+  E MEK  E+I+E+CWE D+E  + +R EL E+
Sbjct: 1153 GHRYPMIRKAAAEQVYLALLQNGILVTEEKMEKVIEIISESCWEADMETTKTQRLELCEL 1212

Query: 1202 AGFGAATSQKPGNEQTRRKTEERNAASTDENKSYSSLVDFSGY 1244
            AG       K  N    +     N ++ DEN SYSSLVD SG+
Sbjct: 1213 AGLDHEVVFKTRNRLVIKDIAG-NKSAADENASYSSLVDSSGF 1254



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,845,373
Number of extensions: 935410
Number of successful extensions: 2629
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2622
Number of HSP's successfully gapped: 2
Length of query: 1244
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1134
Effective length of database: 8,090,809
Effective search space: 9174977406
Effective search space used: 9174977406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)