BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0508100 Os10g0508100|Os10g0508100
(470 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60680.1 | chr3:22430246-22431745 FORWARD LENGTH=500 252 3e-67
AT2G45260.1 | chr2:18664661-18665938 REVERSE LENGTH=426 189 3e-48
AT3G14870.1 | chr3:5004159-5005586 FORWARD LENGTH=476 138 6e-33
AT1G53380.1 | chr1:19913341-19914702 REVERSE LENGTH=454 136 3e-32
AT5G58960.1 | chr5:23805799-23808360 FORWARD LENGTH=560 131 7e-31
AT1G29300.1 | chr1:10248120-10249499 REVERSE LENGTH=460 125 6e-29
AT4G34080.1 | chr4:16326985-16327797 FORWARD LENGTH=271 90 2e-18
AT4G33320.1 | chr4:16057038-16057916 REVERSE LENGTH=293 75 1e-13
AT2G30380.1 | chr2:12948284-12950573 FORWARD LENGTH=520 68 9e-12
AT1G12330.1 | chr1:4194673-4196627 FORWARD LENGTH=506 58 9e-09
AT5G12900.1 | chr5:4072151-4074445 REVERSE LENGTH=563 52 7e-07
>AT3G60680.1 | chr3:22430246-22431745 FORWARD LENGTH=500
Length = 499
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 201/359 (55%), Gaps = 30/359 (8%)
Query: 117 VSHLRRLSEVKRLARD-----PGVGGGALTAHLEAQVRENQALLRSFDAVVNRLQXXXXX 171
VS+L++LS++K+ R+ A+ + LE++V+ENQ+ LR+ + V NRLQ
Sbjct: 159 VSNLQKLSDLKQFYRNYRQSLDFESDLAIGSCLESRVQENQSKLRALETVSNRLQAEMDA 218
Query: 172 XXXXXXSLRRDHAELADGNXXXXXXXXXXXXXXXXXXXXXXXXXMLSAGVFDSVLRDALR 231
SLR E+ +LS VF+S+L DA +
Sbjct: 219 KDLQVWSLRNKLGEIQKSTSKLSKRLSSNSSLDV----------LLSVRVFESLLYDAFK 268
Query: 232 VAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALLSRVCLSMFDGFDSYQF 291
+FT+ L +L+ AGWDL V+P V Y++ H RYALLS VCL MF GFD F
Sbjct: 269 ATQKFTKILIELMEKAGWDLDLVAKSVHPEVDYAKERHNRYALLSYVCLGMFRGFDGEGF 328
Query: 292 G-GSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDCEFAQFCDRKYKQLIHP 350
D E + + SL++ ++H ++PMEL++ DC F++FCD+KY +LIHP
Sbjct: 329 DLNENDYEESERSSV----DSSLRELMQHVSSNPMELLDRDKDCAFSRFCDKKYHELIHP 384
Query: 351 GIESSLFGNSDCGK--LPVLGVAGPLYELFVAMASSIWTLHRLAWAYDPAVGIFQIGQGA 408
+ SS+F N D + L YE FV MASSIWTLH+LA ++DPAV IFQ+ G
Sbjct: 385 NMASSIFSNMDENEAVLSSWRSLSTFYESFVTMASSIWTLHKLALSFDPAVEIFQVESGV 444
Query: 409 EYSVVYMENIVR---SKGFSGSKELGKMMRPKVGFTVVPGFRLGGTVIQCRVYLDCGKR 464
E+S+V+MEN+++ K FS S R KVGFTVVPGF++G TVIQC+VYL G +
Sbjct: 445 EFSIVFMENVLKRKQDKKFSMSP-----TRAKVGFTVVPGFKIGCTVIQCQVYLTGGSK 498
>AT2G45260.1 | chr2:18664661-18665938 REVERSE LENGTH=426
Length = 425
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 174/351 (49%), Gaps = 17/351 (4%)
Query: 117 VSHLRRLSEVKRLARDPG---VGGGALTAHLEAQVRENQALLRSFDAVVNRLQXXXXXXX 173
+S L+ LSE+K R+ V + L A+++E Q+LL++++ +V + Q
Sbjct: 77 ISELKNLSEMKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKD 136
Query: 174 XXXXSLRRDHAELADGNXXXXXXXXXXXXXXXXXXXXXXXXXM--LSAGVFDSVLRDALR 231
+ + E L+ ++ S A +
Sbjct: 137 SEITQMLQKIEEANQKRLKLEKNLKLRGMSTNEGSNGDGNMQFPDLTTELYVSTYEAAAK 196
Query: 232 VAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALLSRVCLSMFDGFDSYQF 291
H F++ L ++++ AGWDL + P V Y++ H +YA S +C MF GF F
Sbjct: 197 AVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFESYICQRMFSGFQQKNF 256
Query: 292 GGSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDCEFAQFCDRKYKQLIHPG 351
++++ + D + +QF+ D DP++ + ++PD F FC KY L+HP
Sbjct: 257 SVNSESAAVMAND---DTDTFFRQFLALKDMDPLDALGTNPDSNFGIFCRSKYLLLVHPK 313
Query: 352 IESSLFGNSDCGKLPVLGVAGP---LYELFVAMASSIWTLHRLAWAYDPAVGIFQIGQGA 408
+E+S FGN D V G P Y+ F+ +A SIW LHRLA+++DPA IFQ+ +G+
Sbjct: 314 MEASFFGNLDQRDY-VTGGGHPRTAFYQAFLKLAKSIWILHRLAYSFDPAAKIFQVKKGS 372
Query: 409 EYSVVYMENIVRSKGFSGSKELGKMMRPKVGFTVVPGFRLGGTVIQCRVYL 459
E+S YME++V++ +E P+VG V+PGF +GG+VIQ RVY+
Sbjct: 373 EFSDSYMESVVKNIVVDEKEE-----NPRVGLMVMPGFWIGGSVIQSRVYV 418
>AT3G14870.1 | chr3:5004159-5005586 FORWARD LENGTH=476
Length = 475
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 217 LSAGVFDSVLRDALRVAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALLS 276
+S+ F + L ++ F + + + ++ A WD+ + P V Y + H +AL
Sbjct: 225 VSSTHFVTYLHHTVKSIRGFVKLMVEQMKLAAWDIDMAAELIQPDVLYYKQDHKCFALEH 284
Query: 277 RVCLSMFDGFDSYQFGG-STDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDCE 335
VC M + F F S+ T+ E + R F E P E + S P
Sbjct: 285 YVCKIMLEAFQLPYFSNESSKKTSREDKAMFFER------FTELRSMKPREYLASRPKSR 338
Query: 336 FAQFCDRKYKQLIHPGIESSLFGN------SDCGKLPVLGVAGPLYELFVAMASSIWTLH 389
A+FC KY QLIHP +E + FG+ G+ P + F+ MA +W LH
Sbjct: 339 LAKFCRTKYLQLIHPKMEQAFFGHLHQRNQVTAGEFPETSLCTA----FLEMAKRVWLLH 394
Query: 390 RLAWAYDPAVGIFQIGQGAEYSVVYMENIVRSKGFSGSKELGKMMRPK-VGFTVVPGFRL 448
LA+++DP IFQ+ +G +S VYM+++ FS +E V FTVVPGFR+
Sbjct: 395 CLAFSFDPEASIFQVSRGCRFSEVYMKSVSEEAFFSPEQEESSSETEPGVAFTVVPGFRI 454
Query: 449 GGTVIQCRVYL--DCGKREG 466
G T IQC VYL C +R+
Sbjct: 455 GKTTIQCEVYLSRSCQRRQS 474
>AT1G53380.1 | chr1:19913341-19914702 REVERSE LENGTH=454
Length = 453
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 14/351 (3%)
Query: 117 VSHLRRLSEVKRLARDPGVGGGALTAHLEAQVRENQALLRSFDAVVNRLQXXXXXXXXXX 176
V+ L+ LSE+K+ V + A+++E ++LL++++ + +L+
Sbjct: 108 VAELKTLSELKQCFMKKQVDPNPERTLVLAEIQELRSLLKTYEIMGKKLESQYKLKDSEI 167
Query: 177 XSLRRDHAELADGNXXXXXXXXXXXXXXXXXXXXXXXXXMLSAGVFDSVLRDALRVAHRF 236
LR E N L+ F + L ++ F
Sbjct: 168 IFLREKLDESMKQNKLTEKRLNQSGQLCNPLDNLHLSA--LNPTHFVTYLHHTVKSTRGF 225
Query: 237 TRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALLSRVCLSMFDGFDSYQFGGSTD 296
+ + + ++ AGWD+ ++PGV Y + H + V MF+ F F S++
Sbjct: 226 VKLMIEQMKLAGWDISSAANSIHPGVFYYKQDHKCFTFEHFVSNVMFEAFHLPYFSTSSE 285
Query: 297 ATTLEGIDLA-IRRNESLQQFIEHSDADPMELINSSPDCEFAQFCDRKYKQLIHPGIESS 355
+ + + + R ++F E + + + P FA+FC KY QLIHP +E +
Sbjct: 286 SRSYKKKKQSNADREMFFERFKELRSMKAKDYLTARPKSRFARFCRAKYLQLIHPKMEQA 345
Query: 356 LFGN------SDCGKLPVLGVAGPLYELFVAMASSIWTLHRLAWAYDPAVGIFQIGQGAE 409
FG+ G+ P L+ F+ MA IW LH LA +++ IF++ +G
Sbjct: 346 FFGHLHLRNQVSAGEFP----ETSLFSGFLEMAKRIWLLHCLALSFEREAEIFRVPKGCR 401
Query: 410 YSVVYMENIVRSKGFSGSKELGKMMRPKVGFTVVPGFRLGGTVIQCRVYLD 460
+S VYM+++ F + E P+V FTVVPGFR+G T IQC VYL
Sbjct: 402 FSEVYMKSVAEEAFFPAA-ESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451
>AT5G58960.1 | chr5:23805799-23808360 FORWARD LENGTH=560
Length = 559
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 129/262 (49%), Gaps = 32/262 (12%)
Query: 221 VFDSVLRDALRVAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYS--------------- 265
+F+ + + FT L L+R A WD+ + A S
Sbjct: 303 LFEMTMIQVKEASKSFTGILLSLMRAAHWDIAAAVRSIEAASASSDGMSASSFASSVQSS 362
Query: 266 RPG-HCRYALLSRVCLSMFDGFDSYQFGGSTDATTLEGIDLAIRRNESLQQFIEHSDADP 324
P H ++AL S +C +F GFD F ++L I+ R + QF + DP
Sbjct: 363 VPNQHAKFALESYICRKIFQGFDHETFYMDGSLSSL--INPDQYRRDCFAQFKDMKAMDP 420
Query: 325 MELINSSPDCEFAQFCDRKYKQLIHPGIESSLFGNSDCGKLPVLGVA--GPLYELFVAMA 382
MEL+ P C F +FC +KY +IH +E SLFG+S+ +L V G Y F+ +A
Sbjct: 421 MELLGILPTCHFGKFCSKKYLSIIHQKMEESLFGDSEQRELVVAGNHPRSQFYGEFLGLA 480
Query: 383 SSIWTLHRLAWAYDPAVGIFQIGQGAEYSVVYMENIVRSKGFS-GSKELGKMMRPKVGFT 441
++W LH LA++ DP+ F+ +GAE+ YME++VR FS G G++ VGF
Sbjct: 481 KAVWLLHLLAFSLDPSPSHFEANRGAEFHSQYMESVVR---FSDGRVPAGQV----VGFP 533
Query: 442 VVPGFRLG----GTVIQCRVYL 459
V PGF+L G++I+ RVYL
Sbjct: 534 VCPGFKLSHQGKGSIIKSRVYL 555
>AT1G29300.1 | chr1:10248120-10249499 REVERSE LENGTH=460
Length = 459
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 117 VSHLRRLSEVKRLARDPGVGGGALTAHLEAQVRENQALLRSFDAVVNRLQXXXXXXXXXX 176
V LR LSE+KR + A + A+++E Q+L+R+++ + +L+
Sbjct: 126 VEELRALSELKRSFLRKELNLSPQVAIMLAEIQEQQSLMRTYEITIKKLEFEVTEKQLKI 185
Query: 177 XSLRRDHAELADGNXXXXXXXXXXXXXXXXXXXXXXXXXMLSAGVFDSVLRDALRVAHRF 236
L+ E N L+ F VL LR F
Sbjct: 186 DELKMSFEESLVVNKSLEKKLSASGSVSVFDNIEIRN---LNLSSFVQVLGFTLRSVRSF 242
Query: 237 TRSLADLLRCAGWDLXXXXXXVY------PGVAYSRPGHCRYALLSRVCLSMFDGFDSYQ 290
+ + + A WDL ++RP H +A S VC MF+ F +
Sbjct: 243 VKLIVKEMESASWDLDAAASAAVSVNVKNASTVFARPSHRCFAFESFVCGKMFENFGAPD 302
Query: 291 FGGSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDCEFAQFCDRKYKQLIHP 350
F RR E F + DP++ + +P FA+F KY ++H
Sbjct: 303 FS---------------RREE----FEKLRSVDPIQYLTRNPGSSFARFVVHKYLSVVHA 343
Query: 351 GIESSLFGNSDCGKLPVLG--VAGPLYELFVAMASSIWTLHRLAWAYDPAVGIFQIGQGA 408
+E S FGN + KL G + F MA IW LH LA++ V +FQ+ +G
Sbjct: 344 KMECSFFGNLNQRKLVNSGGFPDSGFFATFCEMAKRIWLLHCLAFSLSGNVTVFQLKRGC 403
Query: 409 EYSVVYMENIVRSKGFSGSKEL--GKMMRPKVGFTVVPGFRLGGTVIQCRVYL 459
+S VYME++ SG + L G +VGFTVVPGF++G VIQ +VYL
Sbjct: 404 RFSQVYMESVK-----SGDESLFSGDNSDIRVGFTVVPGFKIGENVIQSQVYL 451
>AT4G34080.1 | chr4:16326985-16327797 FORWARD LENGTH=271
Length = 270
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 117 VSHLRRLSEVKRLARDPG---VGGGALTAHLEAQVRENQALLRSFDAVVNRLQXXXXXXX 173
+S L+ LSE+K R+ V + L A+++E Q+LL++++ +V + Q
Sbjct: 42 ISELKNLSEMKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKD 101
Query: 174 XXXXSLRRDHAELADGNXXXXXXXXXXXXXXXXXXXXXXXXXM--LSAGVFDSVLRDALR 231
+ + E L+ +F S A +
Sbjct: 102 SEITQMLQKIEEANQKRLKLEKNLKLRGMSTNQGSGGDGNLQFPDLTTELFVSTYEAAAK 161
Query: 232 VAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALLSRVCLSMFDGFDSYQF 291
V H F++ L ++++ AGWDL + P V Y++ H YA S +C MF GF F
Sbjct: 162 VVHDFSKPLINMMKAAGWDLDTAANSIEPDVVYAKRPHKEYAFESYICQRMFSGFQQKNF 221
Query: 292 GGSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDCEFAQFCDRK 343
++++ T+ D + +QF+ D DP++ + ++PD F FC K
Sbjct: 222 SVNSESATVMADD---DTDTFFRQFLALKDMDPLDALGTNPDSNFGIFCRSK 270
>AT4G33320.1 | chr4:16057038-16057916 REVERSE LENGTH=293
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 217 LSAGVFDSVLRDALRVAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALLS 276
L+ +F S A + H F++ L ++++ AGWDL + P V Y++ H +YA S
Sbjct: 159 LTTELFVSTYEVAAKAVHDFSKPLINMMKAAGWDLDSAANSIEPDVVYAKRPHKKYAFES 218
Query: 277 RVCLSMFDGFDSYQFGGSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDC 334
+C MF GF F ++++ T+ D + +QF+ D DP++ + ++PD
Sbjct: 219 YICQRMFSGFQQKNFSVNSESATVMADD---DTDTFFRQFLALKDMDPLDALGTNPDS 273
>AT2G30380.1 | chr2:12948284-12950573 FORWARD LENGTH=520
Length = 519
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 22/159 (13%)
Query: 216 MLSAGVFDSVLRDALRVAHRFTRSLADLLRCAGWDLXXXXXXVYPGVAYSRPGHCRYALL 275
++S F+ R A + H F + L L++ W+L + V +++ +YA
Sbjct: 193 IVSVSSFEFAFRAASKSVHDFAKPLITLMKATDWNLEKAVESIVGNVTFAKTSDKKYAFE 252
Query: 276 SRVCLSMFDGFDSYQFGGSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSPDCE 335
S + MF G D T L D DP++ + + D
Sbjct: 253 SYIVRRMFHGIKL----NPCDVTELMSFD------------------DPLDALTAFSDSA 290
Query: 336 FAQFCDRKYKQLIHPGIESSLFGNSDCGKLPVLGVAGPL 374
F++FC +KY ++HP +E+S FGN D L +LG L
Sbjct: 291 FSRFCGQKYLLVVHPSMEASFFGNLDMRGLVLLGWVNVL 329
>AT1G12330.1 | chr1:4194673-4196627 FORWARD LENGTH=506
Length = 505
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 28/194 (14%)
Query: 273 ALLSRVCLSMFDGFDSYQFGGSTDATTLEGIDLAIRRNESLQQFIEHSDADPMELINSSP 332
A+LSR + F+ F++ F + L ID S +E + + +
Sbjct: 312 AILSR---AFFEDFEAPGFQKNGSTRILNPIDRCESNYASFNVLMELTWDEVLSRGTKHF 368
Query: 333 DCEFAQFCDRKYKQLIHPGIESSLFGNSDCGKLPVLGVAGPLYELFVAMASSIWTLHRLA 392
EF++FCDRK ++ S L N PL + F + S+W +H LA
Sbjct: 369 SEEFSRFCDRKMSDVV-----SMLSWNR--------AWPEPLLQAFFGASKSVWLVHLLA 415
Query: 393 WAYDPAVGIFQIGQGAEYSVVYMENIVRSKGFSGSKELGKMMRPKVGFTVVPGFRLGGTV 452
+ +P + IF++ + + +YME +G + ++R V PGF + G+V
Sbjct: 416 NSVNPGLQIFRVEKDDRFDPIYMEE-------TGGERFKSLVRA----MVQPGFYVYGSV 464
Query: 453 IQCRVYL-DCGKRE 465
++C+V CG E
Sbjct: 465 VKCKVVCKQCGSDE 478
>AT5G12900.1 | chr5:4072151-4074445 REVERSE LENGTH=563
Length = 562
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 29/129 (22%)
Query: 335 EFAQFCDRKYKQLIHPGIESSLFGNSDCGKLPVLGVAGP----LYELFVAMASSIWTLHR 390
EF++FCD K +I L P + + F A +W LH
Sbjct: 449 EFSRFCDEKMSLII-----------------TTLNWTRPWSEQMLQAFFVAAKCVWLLHL 491
Query: 391 LAWAYDPAVGIFQIGQGAEYSVVYMENIVRSKGFSGSKELGKMMR--PKVGFTVVPGFRL 448
LA++++PA+GI ++ + E+ +ME++ ++ + R +V V+PGF +
Sbjct: 492 LAFSFNPALGILRVEENREFESSFMEDM------GADRQRSALSRGPARVKVMVMPGFYV 545
Query: 449 GGTVIQCRV 457
V++C+V
Sbjct: 546 LDRVLRCKV 554
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,240,674
Number of extensions: 249152
Number of successful extensions: 456
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 429
Number of HSP's successfully gapped: 11
Length of query: 470
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 368
Effective length of database: 8,310,137
Effective search space: 3058130416
Effective search space used: 3058130416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)