BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0503500 Os10g0503500|AK101024
(620 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00570.1 | chr4:242817-246522 REVERSE LENGTH=608 810 0.0
AT2G13560.1 | chr2:5650089-5655103 FORWARD LENGTH=624 692 0.0
AT2G19900.1 | chr2:8592106-8595403 REVERSE LENGTH=582 362 e-100
AT5G25880.1 | chr5:9024549-9028260 FORWARD LENGTH=589 360 2e-99
AT5G11670.1 | chr5:3754456-3758040 FORWARD LENGTH=589 347 9e-96
AT1G79750.1 | chr1:30007655-30011179 REVERSE LENGTH=647 340 1e-93
>AT4G00570.1 | chr4:242817-246522 REVERSE LENGTH=608
Length = 607
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/581 (67%), Positives = 451/581 (77%), Gaps = 6/581 (1%)
Query: 40 CIVHKRGTDILHDPWFNKDTAFPMTEXXXXXXXXXXXXXVMSFEQQYDRFINSFRSLEHN 99
CIVHKRG DILHDPWFNKDT FP+TE VM+ QQ DRFI SFRSLE+N
Sbjct: 33 CIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVMTCVQQCDRFIESFRSLENN 92
Query: 100 TRGEPDTIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFR 159
T+GEP+ +VALAKWR+LNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVC+NYSGL+R
Sbjct: 93 TKGEPENVVALAKWRMLNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYR 152
Query: 160 RPRGMYFSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYV 219
RPRGMYFSAKDKGEMMSMIYNWPA +VDMIV+TDGSRILGLGDLGVQGIGIPIGKLD+YV
Sbjct: 153 RPRGMYFSAKDKGEMMSMIYNWPAPQVDMIVITDGSRILGLGDLGVQGIGIPIGKLDMYV 212
Query: 220 AAAGINPQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARWPK 279
AAAGINPQ+VLPIMLDVGTNN KLL++ LYLG+RQPRLEGEEYL ++DEFMEA RWPK
Sbjct: 213 AAAGINPQRVLPIMLDVGTNNEKLLQNDLYLGVRQPRLEGEEYLEIIDEFMEAAFTRWPK 272
Query: 280 AVVQFEDFQMKWAFETLQRYRNRFCMFNDDXXXXXXXXXXXXXXXXXXXXXPLSDFTKQK 339
AVVQFEDFQ KWAF TL+RYR +FCMFNDD P+SDF QK
Sbjct: 273 AVVQFEDFQAKWAFGTLERYRKKFCMFNDDVQGTAGVALAGLLGTVRAQGRPISDFVNQK 332
Query: 340 XXXXXXXXXXXXXLNMAKQAMLRMPGINRSGEGHNQFWVLDKDGLITKSRKGLDPAVARY 399
MA QA+ RM GI+ S E F+++DKDGL+T R LDP +
Sbjct: 333 IVVVGAGSAGLGVTKMAVQAVARMAGISES-EATKNFYLIDKDGLVTTERTKLDPGAVLF 391
Query: 400 ARGFGPEEVQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFA 459
A+ P E++ EGAS+VEVV+KV+PHVLLGLSGVGGIFNEEVLKAM+ESDS +PAIFA
Sbjct: 392 AK--NPAEIR---EGASIVEVVKKVRPHVLLGLSGVGGIFNEEVLKAMRESDSCKPAIFA 446
Query: 460 MSNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGLGA 519
MSNPT AECT D FK+ G N VFASGSPF NV L NG+ G+ NQANNMYLFPGIGLG
Sbjct: 447 MSNPTLNAECTAADAFKHAGGNIVFASGSPFENVELENGKVGHVNQANNMYLFPGIGLGT 506
Query: 520 LLSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHITXXXXXXXXXXXXDED 579
LLSGAR +TDGMLQ+A+ECLASY+TD+E++KGIL+PSI++IRHIT +D
Sbjct: 507 LLSGARIVTDGMLQAASECLASYMTDEEVQKGILYPSINNIRHITAEVGAAVLRAAVTDD 566
Query: 580 LAEGRCDVDARDLKSMTEADTVDFVARKMWYPIYSPLVNDK 620
+AEG DV +DL M++ DTV+++ R MW+P+YSPLV++K
Sbjct: 567 IAEGHGDVGPKDLSHMSKEDTVNYITRNMWFPVYSPLVHEK 607
>AT2G13560.1 | chr2:5650089-5655103 FORWARD LENGTH=624
Length = 623
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/580 (58%), Positives = 411/580 (70%), Gaps = 2/580 (0%)
Query: 40 CIVHKRGTDILHDPWFNKDTAFPMTEXXXXXXXXXXXXXVMSFEQQYDRFINSFRSLEHN 99
IVHK+G DILHDPWFNK TAF MTE VM EQQ RF+ + LE
Sbjct: 40 TIVHKQGLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEEQ 99
Query: 100 TRGEPDTIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFR 159
R P ALAKWRILNRLHDRNET+YY+VLI+NI+++API+YTPTVGLVC+NYSGLFR
Sbjct: 100 ARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFR 159
Query: 160 RPRGMYFSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYV 219
RPRGMYFSA+D+GEMMSM+YNWPAE+VDMIVVTDGSRILGLGDLGV GIGI +GKLD+YV
Sbjct: 160 RPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGIAVGKLDLYV 219
Query: 220 AAAGINPQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARWPK 279
AAAGINPQ+VLP+M+DVGTNN KL D +YLGL+Q RLE ++Y+ V+DEFMEAV+ RWP
Sbjct: 220 AAAGINPQRVLPVMIDVGTNNEKLRNDPMYLGLQQRRLEDDDYIDVIDEFMEAVYTRWPH 279
Query: 280 AVVQFEDFQMKWAFETLQRYRNRFCMFNDDXXXXXXXXXXXXXXXXXXXXXPLSDFTKQK 339
+VQFEDFQ KWAF+ LQRYR + MFNDD P+ DF K K
Sbjct: 280 VIVQFEDFQSKWAFKLLQRYRCTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKMK 339
Query: 340 XXXXXXXXXXXXXLNMAKQAMLRMPGINRSG--EGHNQFWVLDKDGLITKSRKGLDPAVA 397
LN A++ M RM G + +QFWV+D GLIT+ R+ +DP
Sbjct: 340 IVVAGAGSAGIGVLNAARKTMARMLGNTETAFDSAQSQFWVVDAQGLITEGRENIDPEAQ 399
Query: 398 RYARGFGPEEVQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAI 457
+AR E Q L EGA+LVEVVR+VKP VLLGLS VGG+F++EVL+AMK S S RPAI
Sbjct: 400 PFARKTKEMERQGLKEGATLVEVVREVKPDVLLGLSAVGGLFSKEVLEAMKGSTSTRPAI 459
Query: 458 FAMSNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGL 517
FAMSNPT AECTP+D F +G+N +FASGSPF NV GNG G+ NQ NNMYLFPGIGL
Sbjct: 460 FAMSNPTKNAECTPQDAFSILGENMIFASGSPFKNVEFGNGHVGHCNQGNNMYLFPGIGL 519
Query: 518 GALLSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHITXXXXXXXXXXXXD 577
G LLSGA ++DGMLQ+A+ECLA+Y++++E+ +GI++P IS IR IT +
Sbjct: 520 GTLLSGAPIVSDGMLQAASECLAAYMSEEEVLEGIIYPPISRIRDITKRIAAAVIKEAIE 579
Query: 578 EDLAEGRCDVDARDLKSMTEADTVDFVARKMWYPIYSPLV 617
EDL EG ++DAR+++ + E +++V MW P Y LV
Sbjct: 580 EDLVEGYREMDAREIQKLDEEGLMEYVENNMWNPEYPTLV 619
>AT2G19900.1 | chr2:8592106-8595403 REVERSE LENGTH=582
Length = 581
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 297/524 (56%), Gaps = 32/524 (6%)
Query: 46 GTDILHDPWFNKDTAFPMTEXXXXXXXXXXXXXVMSFEQQYDRFINSFRSLEHNTRGEPD 105
G +L DP +NK AF E V+ + Q R +N+ R +
Sbjct: 42 GYSLLRDPRYNKGLAFTEKERDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQ-------- 93
Query: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
L K+ L L +RNE L+Y++LIDN+++ PI+YTPTVG C+ + +FRRP+G++
Sbjct: 94 --FPLQKYMALTELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLF 151
Query: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225
S KDKG+++ ++ NWP + +IVVTDG RILGLGDLG QG+GIP+GKL +Y A G+
Sbjct: 152 ISLKDKGKILDVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYSALGGVR 211
Query: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW-PKAVVQF 284
P LP+ +DVGTNN KLL D+ Y+GLRQ R G+EY +++EFM AV + K ++QF
Sbjct: 212 PSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGQEYSELLNEFMSAVKQNYGEKVLIQF 271
Query: 285 EDFQMKWAFETLQRYRNRFCMFNDDXXXXXXXXXXXXXXXXXXXXXPLSD--FTKQKXXX 342
EDF AFE L +Y + +FNDD PL++ F
Sbjct: 272 EDFANHNAFELLAKYSDTHLVFNDDIQGTASVVLAGLVSAQKLTNSPLAEHTFLFLGAGE 331
Query: 343 XXXXXXXXXXLNMAKQAMLRMPGINRS-GEGHNQFWVLDKDGLITKSRKGLDPAVARYAR 401
L M+KQ +N S E + W++D GLI SRK ++ + +
Sbjct: 332 AGTGIAELIALYMSKQ-------MNASVEESRKKIWLVDSKGLIVNSRKD---SLQDFKK 381
Query: 402 GFGPEEVQDLHEGAS-LVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFAM 460
+ E HE L+ ++ +KP VL+G SGVG F +EV++AM S + RP I A+
Sbjct: 382 PWAHE-----HEPVKDLLGAIKAIKPTVLIGSSGVGRSFTKEVIEAMS-SINERPLIMAL 435
Query: 461 SNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGLGAL 520
SNPTT++ECT E+ + + A+FASGSPF V G+ + QANN Y+FPG GLG +
Sbjct: 436 SNPTTQSECTAEEAYTWSKGRAIFASGSPFDPVEY-EGKVFVSTQANNAYIFPGFGLGLV 494
Query: 521 LSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHIT 564
+SGA + D ML +AAE LA ++ + KG+++PS SSIR I+
Sbjct: 495 ISGAIRVHDDMLLAAAEALAGQVSKENYEKGMIYPSFSSIRKIS 538
>AT5G25880.1 | chr5:9024549-9028260 FORWARD LENGTH=589
Length = 588
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/524 (38%), Positives = 289/524 (55%), Gaps = 32/524 (6%)
Query: 46 GTDILHDPWFNKDTAFPMTEXXXXXXXXXXXXXVMSFEQQYDRFINSFRSLEHNTRGEPD 105
G ++ DP +NK AF E V+S + Q R + HN R
Sbjct: 49 GYTLMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQE-------RKVMHNLR---Q 98
Query: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
V L ++ L L +RNE L+Y++LIDN+++ P++YTPTVG C+ Y ++RRP+G+Y
Sbjct: 99 YTVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLY 158
Query: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225
S K+KG+++ ++ NWP + +IVVTDG RILGLGDLG QG+GIP+GKL +Y A GI
Sbjct: 159 ISLKEKGKILEVLKNWPQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIR 218
Query: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW-PKAVVQF 284
P LPI +DVGTNN KLL ++ Y+GL+Q R GEEY + EFM AV + K +VQF
Sbjct: 219 PSACLPITIDVGTNNEKLLNNEFYIGLKQKRANGEEYAEFLQEFMCAVKQNYGEKVLVQF 278
Query: 285 EDFQMKWAFETLQRYRNRFCMFNDDXXXXXXXXXXXXXXXXXXXXXPLSDFTKQKXXXXX 344
EDF AFE L +Y + +FNDD L+D T
Sbjct: 279 EDFANHHAFELLSKYCSSHLVFNDDIQGTASVVLAGLIAAQKVLGKSLADHT------FL 332
Query: 345 XXXXXXXXLNMAKQAMLRMPGINRSG----EGHNQFWVLDKDGLITKSRKGLDPAVARYA 400
+A+ L++ +G E + W++D GLI RK
Sbjct: 333 FLGAGEAGTGIAELIALKIS--KETGKPIDETRKKIWLVDSKGLIVSERK-------ESL 383
Query: 401 RGFGPEEVQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFAM 460
+ F D L+ V +KP VL+G SGVG F +EV++AM + +P I A+
Sbjct: 384 QHFKQPWAHDHKPVKELLAAVNAIKPTVLIGTSGVGKTFTKEVVEAMATLNE-KPLILAL 442
Query: 461 SNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGLGAL 520
SNPT++AECT E+ + + A+FASGSPF V +G++ QANN Y+FPG+GLG +
Sbjct: 443 SNPTSQAECTAEEAYTWTKGRAIFASGSPFDPVQY-DGKKFTPGQANNCYIFPGLGLGLI 501
Query: 521 LSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHIT 564
+SGA + D ML +A+E LAS +T++ G+++P ++IR I+
Sbjct: 502 MSGAIRVRDDMLLAASEALASQVTEENFANGLIYPPFANIRKIS 545
>AT5G11670.1 | chr5:3754456-3758040 FORWARD LENGTH=589
Length = 588
Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 306/573 (53%), Gaps = 42/573 (7%)
Query: 46 GTDILHDPWFNKDTAFPMTEXXXXXXXXXXXXXVMSFEQQYDRFINSFRSLEHNTRGEPD 105
G ++ DP +NK AF E ++S + Q R + HN R
Sbjct: 49 GYTLMRDPRYNKGLAFTDKERDAHYLTGLLPPVILSQDVQE-------RKVMHNLR---Q 98
Query: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
V L ++ L L +RNE L+Y++LIDN+++ P++YTPTVG C+ Y +FR+P+G+Y
Sbjct: 99 YTVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLY 158
Query: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225
S +KG+++ ++ NWP + +IVVTDG RILGLGDLG QG+GIP+GKL +Y A GI
Sbjct: 159 ISLNEKGKILEVLKNWPQRGIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIR 218
Query: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW-PKAVVQF 284
P LPI +DVGTNN KLL D+ Y+GL+Q R G+EY + EFM AV + K +VQF
Sbjct: 219 PSACLPITIDVGTNNEKLLNDEFYIGLKQRRATGQEYAEFLHEFMCAVKQNYGEKVLVQF 278
Query: 285 EDFQMKWAFETLQRYRNRFCMFNDDXXXXXXXXXXXXXXXXXXXXXPLSD--FTKQKXXX 342
EDF AF+ L +Y + +FNDD L+D F
Sbjct: 279 EDFANHNAFDLLSKYSDSHLVFNDDIQGTASVVLAGLIAAQKVLGKKLADHTFLFLGAGE 338
Query: 343 XXXXXXXXXXLNMAKQAMLRMPGINRSGEGHNQFWVLDKDGLITKSRKGLDPAVARYARG 402
L ++K+ + E + W++D GLI SRK ++ + +
Sbjct: 339 AGTGIAELIALKISKETGAPIT------ETRKKIWLVDSKGLIVSSRK---ESLQHFKQP 389
Query: 403 FGPEE--VQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFAM 460
+ E V+D L+ V +KP VL+G SGVG F +EV++AM +++ +P I A+
Sbjct: 390 WAHEHKPVKD------LIGAVNAIKPTVLIGTSGVGQTFTKEVVEAMA-TNNEKPLILAL 442
Query: 461 SNPTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGLGAL 520
SNPT++AECT E + + A+F SGSPF V +G+ QANN Y+FPG+GLG +
Sbjct: 443 SNPTSQAECTAEQAYTWTKGRAIFGSGSPFDPVVY-DGKTYLPGQANNCYIFPGLGLGLI 501
Query: 521 LSGARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHITXXXXXXXXXXXXDEDL 580
+SGA + D ML +A+E LA+ +T++ G+++P S+IR I+ D L
Sbjct: 502 MSGAIRVRDDMLLAASEALAAQVTEEHYANGLIYPPFSNIREISANIAACVAAKTYDLGL 561
Query: 581 AEGRCDVDARDLKSMTEADTVDFVARKMWYPIY 613
A A+DL V F M+ P+Y
Sbjct: 562 ASNLP--RAKDL--------VKFAESSMYSPVY 584
>AT1G79750.1 | chr1:30007655-30011179 REVERSE LENGTH=647
Length = 646
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 284/522 (54%), Gaps = 28/522 (5%)
Query: 46 GTDILHDPWFNKDTAFPMTEXXXXXXXXXXXXXVMSFEQQYDRFINSFRSLEHNTRGEPD 105
G +L DP NK AF E V+S + Q + +++ R +
Sbjct: 107 GYTLLRDPHHNKGLAFSHRERDAHYLRGLLPPTVISQDLQVKKIMHTLRQYQ-------- 158
Query: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
V L K+ + L + NE L+Y++LID++++ P+IYTPTVG C+ Y +F RP+G++
Sbjct: 159 --VPLQKYMAMMDLQETNERLFYKLLIDHVEELLPVIYTPTVGEACQKYGSIFLRPQGLF 216
Query: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225
S K+KG++ ++ NWP + + +IVVTDG RILGLGDLG QG+GIP+GKL +Y A G+
Sbjct: 217 ISLKEKGKIHEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVR 276
Query: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW-PKAVVQF 284
P LP+ +DVGTNN KLL D+ Y+GLRQ R GEEY ++ EFM AV + K V+QF
Sbjct: 277 PSACLPVTIDVGTNNEKLLNDEFYIGLRQRRATGEEYSELMHEFMTAVKQNYGEKVVIQF 336
Query: 285 EDFQMKWAFETLQRYRNRFCMFNDDXXXXXXXXXXXXXXXXXXXXXPLSD--FTKQKXXX 342
EDF AF+ L +Y +FNDD LSD F
Sbjct: 337 EDFANHNAFDLLAKYGTTHLVFNDDIQGTASVVLAGLIAALRFVGGSLSDHRFLFLGAGE 396
Query: 343 XXXXXXXXXXLNMAKQAMLRMPGINRSGEGHNQFWVLDKDGLITKSRKGLDPAVARYARG 402
L ++K++ + + E W++D GLI SRK +
Sbjct: 397 AGTGIAELIALEISKKSHIPLE------EARKNIWLVDSKGLIVSSRK-------ESIQH 443
Query: 403 FGPEEVQDLHEGASLVEVVRKVKPHVLLGLSGVGGIFNEEVLKAMKESDSPRPAIFAMSN 462
F D LV+ V+ +KP VL+G SGVG F ++V++ M + + +P I ++SN
Sbjct: 444 FKKPWAHDHEPIRELVDAVKAIKPTVLIGTSGVGQTFTQDVVETMAKLNE-KPIILSLSN 502
Query: 463 PTTKAECTPEDVFKYVGDNAVFASGSPFSNVTLGNGRQGYANQANNMYLFPGIGLGALLS 522
PT+++ECT E+ + + A+FASGSPF+ V G+ QANN Y+FPG GLG ++S
Sbjct: 503 PTSQSECTAEEAYTWSQGRAIFASGSPFAPVEY-EGKTFVPGQANNAYIFPGFGLGLIMS 561
Query: 523 GARHITDGMLQSAAECLASYITDDEIRKGILFPSISSIRHIT 564
G + D ML +A+E LA + ++ KG+++P +IR I+
Sbjct: 562 GTIRVHDDMLLAASEALAEELMEEHYEKGMIYPPFRNIRKIS 603
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,514,987
Number of extensions: 470025
Number of successful extensions: 945
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 921
Number of HSP's successfully gapped: 9
Length of query: 620
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 515
Effective length of database: 8,227,889
Effective search space: 4237362835
Effective search space used: 4237362835
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)