BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0502600 Os10g0502600|AK069511
         (232 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48890.1  | chr3:18129669-18131353 FORWARD LENGTH=234          204   4e-53
AT5G52240.1  | chr5:21213121-21214557 FORWARD LENGTH=221          201   3e-52
AT2G24940.1  | chr2:10609447-10609749 FORWARD LENGTH=101          101   3e-22
AT4G14965.1  | chr4:8551356-8553368 FORWARD LENGTH=246             74   5e-14

>AT3G48890.1 | chr3:18129669-18131353 FORWARD LENGTH=234
          Length = 233

 Score =  204 bits (518), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 103/156 (66%), Positives = 112/156 (71%)

Query: 5   VAELWETLKQAIVAYTGLSPXXXXXXXXXXXXLYHVVSGIFAGXXXXXXXXXXXXXXXXX 64
           V ++WETLK+ I AYTGLSP            +Y VVSG F                   
Sbjct: 2   VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61

Query: 65  XXXXVQLGEVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDAS 124
               VQLGE++EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFAGKDAS
Sbjct: 62  LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121

Query: 125 RALAKMSFEPQDLTGDISGLGPFELDALQDWEYKFM 160
           RALAKMSFE QDLTGDISGLG FEL+ALQDWEYKFM
Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFM 157



>AT5G52240.1 | chr5:21213121-21214557 FORWARD LENGTH=221
          Length = 220

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 103/158 (65%), Positives = 114/158 (72%), Gaps = 4/158 (2%)

Query: 7   ELWETLKQAIVAYTGLSPXXXXXXXXXXXXLYHVVSGIFAGXXXXXXXXXXXXXXXXXXX 66
           ELW+TLK+AI AYTGLSP            +Y V+SG FA                    
Sbjct: 4   ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63

Query: 67  ----XXVQLGEVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKD 122
                 VQ+GE++EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFAGKD
Sbjct: 64  PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123

Query: 123 ASRALAKMSFEPQDLTGDISGLGPFELDALQDWEYKFM 160
           ASRALAKMSFE +DLT D+SGLGPFELDALQDWEYKFM
Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFM 161



>AT2G24940.1 | chr2:10609447-10609749 FORWARD LENGTH=101
          Length = 100

 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 63/87 (72%)

Query: 73  EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132
           E + E+L QY+G+D  KP+ +AIKG+++DVT  + FYG GG Y++FAGKDASRAL KMS 
Sbjct: 2   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61

Query: 133 EPQDLTGDISGLGPFELDALQDWEYKF 159
             +D++  + GL   E++ L DWE KF
Sbjct: 62  NEEDVSPSLEGLTEKEINTLNDWETKF 88



>AT4G14965.1 | chr4:8551356-8553368 FORWARD LENGTH=246
          Length = 245

 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 49/82 (59%)

Query: 75  SEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEP 134
           S EEL  Y+G+D   P+L+ I G ++DVT+ +  YG GG Y  FAG+DASRA    +F  
Sbjct: 43  SAEELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGYNHFAGRDASRAFVSGNFTG 102

Query: 135 QDLTGDISGLGPFELDALQDWE 156
             LT  + GL   E+ ++ DW 
Sbjct: 103 DGLTDSLQGLSSSEVKSIVDWR 124



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.137    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,753,173
Number of extensions: 88121
Number of successful extensions: 165
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 163
Number of HSP's successfully gapped: 4
Length of query: 232
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 137
Effective length of database: 8,502,049
Effective search space: 1164780713
Effective search space used: 1164780713
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)