BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0498000 Os10g0498000|AK071470
(311 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325 156 1e-38
AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324 155 4e-38
AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322 150 1e-36
AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332 147 6e-36
AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376 142 3e-34
AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321 141 4e-34
AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305 125 3e-29
>AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325
Length = 324
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 156/319 (48%), Gaps = 17/319 (5%)
Query: 3 QRIEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIXXXXXXXXXXXLDF 62
++IEH+ + G+ +H+A IG G +LFVHGFP++WYSWRHQ++ D
Sbjct: 2 EKIEHTTISTNGINMHVASIGSG--PVILFVHGFPDLWYSWRHQLVSFAALGYRAIAPDL 59
Query: 63 PGYGLSEPPADLTQASWQGLMNDLLAILDSLSIPKVFLVAKDFGVKPAYDLALCHPDRVC 122
GYG S+ P + ++ DL+ +LDSL + +VFLV D+G A+ L + PDRV
Sbjct: 60 RGYGDSDAPPSRESYTILHIVGDLVGLLDSLGVDRVFLVGHDWGAIVAWWLCMIRPDRVN 119
Query: 123 GIVSLGV------PPLVESLSFSGL-PEGFYIHRWREPGRAEADFGRFDTRRILRTIYIL 175
+V+ V P + +F L + +YI R++EPG E DF + DT++++ T +
Sbjct: 120 ALVNTSVVFNPRNPSVKPVDAFRALFGDDYYICRFQEPGEIEEDFAQVDTKKLI-TRFFT 178
Query: 176 FSRSEIPVAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPYRTKAAK 235
P + L D + +P W TE+D+ Y D + + G + YR
Sbjct: 179 SRNPRPPCIPKSVGFRGLPDPPS-LPAWLTEQDVRFYGDKFSQKGFTGGLNY-YRALNLS 236
Query: 236 AEGANP----RFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPEG-SHF 290
E P + ++P+ I+G D P KEY+ LK+ P + EG HF
Sbjct: 237 WELTAPWTGLQIKVPVKFIVGDLDITYNIPGTKEYIHEGGLKKHVPFLQEVVVMEGVGHF 296
Query: 291 VQEQFPDLVNQLVIDFVSK 309
+ ++ PD V + F K
Sbjct: 297 LHQEKPDEVTDHIYGFFKK 315
>AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324
Length = 323
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 13/320 (4%)
Query: 1 MDQRIEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIXXXXXXXXXXXL 60
M + + G+ L++A G E +L +HGFPE WYSWRHQ+
Sbjct: 1 MTSSVREKKIKTNGIWLNVAEKGDEEGPLVLLLHGFPETWYSWRHQIDFLSSHGYHVVAP 60
Query: 61 DFPGYGLSEPPADLTQASWQGLMNDLLAILDSLSIPKVFLVAKDFGVKPAYDLALCHPDR 120
D GYG S+ + L+ D++ +LD + F+ D+G + L L PDR
Sbjct: 61 DLRGYGDSDSLPSHESYTVSHLVADVIGLLDHYGTTQAFVAGHDWGAIIGWCLCLFRPDR 120
Query: 121 VCGIVSLGV------PPLVESLSFSGLPEGFYIHRWREPGRAEADFGRFDTRRILRTIYI 174
V G +SL V P L S F +G YI ++++PGRAEA F + D +++ ++
Sbjct: 121 VKGFISLSVPYFPRDPKLKPSDFFKIFGDGLYITQFQKPGRAEAAFAKHDCLSVMKK-FL 179
Query: 175 LFSRSEIPVAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPYRTKAA 234
L +R++ VA EI+D + + +P W TEE++ Y + +++SG + YR+
Sbjct: 180 LITRTDYLVAPPDTEIIDHLEIPSTIPDWITEEEIQVYAEKFQRSGFTGPLNY-YRSMDM 238
Query: 235 KAEGANP----RFEMPMFVIMGQKDYILKFP-ALKEYMSSEKLKEIAPDYGITYIPEGSH 289
E P + +P I G KD + P EY+ E K + P+ I I G H
Sbjct: 239 NWEILAPWQDSKIVVPTKFIAGDKDIGYEGPNGTMEYVKGEVFKIVVPNLEIVVIEGGHH 298
Query: 290 FVQEQFPDLVNQLVIDFVSK 309
F+Q++ + V+Q ++ F++K
Sbjct: 299 FIQQEKSEQVSQEILSFLNK 318
>AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322
Length = 321
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 162/324 (50%), Gaps = 23/324 (7%)
Query: 5 IEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIXXXXXXXXXXXLDFPG 64
+EH + G+ +H+A G + +L +HGFPE+WYSWRHQ+ D G
Sbjct: 1 MEHRKVRGNGIDIHVAIQGPSDGPIVLLLHGFPELWYSWRHQIPGLAARGYRAVAPDLRG 60
Query: 65 YGLSEPPADLTQASWQGLMNDLLAILDSLSIP---KVFLVAKDFGVKPAYDLALCHPDRV 121
YG S+ PA+++ + ++ DL+A++ +L+ KVF+V D+G A+ L L PDRV
Sbjct: 61 YGDSDAPAEISSYTCFNIVGDLIAVISALTASEDEKVFVVGHDWGALIAWYLCLFRPDRV 120
Query: 122 CGIVSLGVP-----------PLVESLSFSGLPEGFYIHRWREPGRAEADFGRFDTRRILR 170
+V+L VP P+ +F G + +YI R++E G EA+ T R+++
Sbjct: 121 KALVNLSVPFSFRPTDPSVKPVDRMRAFYG--DDYYICRFQEFGDVEAEIAEVGTERVMK 178
Query: 171 TIYILFSRSEIPV-AKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPY 229
+L R+ PV + + E+ P+P W TEED++ + +E+ G +
Sbjct: 179 R--LLTYRTPGPVIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFEEKGFSGPVNYYR 236
Query: 230 RTKAAK---AEGANPRFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPE 286
+ ++P ++G+ D + P +KEY+ + KE P + E
Sbjct: 237 NFNRNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLLEEPVVME 296
Query: 287 G-SHFVQEQFPDLVNQLVIDFVSK 309
G +HF+ ++ P + Q+++DF+SK
Sbjct: 297 GVAHFINQEKPQEILQIILDFISK 320
>AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332
Length = 331
Score = 147 bits (371), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 156/323 (48%), Gaps = 17/323 (5%)
Query: 3 QRIEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIXXXXXXXXXXXLDF 62
+ I+H + + G+ +HIA G E +L +HGFP++WY+WRHQ+ D
Sbjct: 2 EGIDHRMVSVNGITMHIAEKGPKEGPVVLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDL 61
Query: 63 PGYGLSEPPADLTQASWQGLMNDLLAILDSL--SIPKVFLVAKDFGVKPAYDLALCHPDR 120
GYG S+ P ++ + ++ DL+A+LDS+ + KVFLV D+G + L L P++
Sbjct: 62 RGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEK 121
Query: 121 VCGIVSLGVP-----PLVESL-SFSGL-PEGFYIHRWREPGRAEADFGRFDTRRILRTIY 173
+ G V L VP P V+ + F + + +YI R++EPG+ E + D R LR ++
Sbjct: 122 INGFVCLSVPYRSRNPKVKPVQGFKAVFGDDYYICRFQEPGKIEGEIASADPRIFLRNLF 181
Query: 174 I--LFSRSEIPVAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPYRT 231
+P E + E+ +P+WF+++DL Y +EK+G + YR
Sbjct: 182 TGRTLGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGLNY-YRA 240
Query: 232 KAAKAEGANP----RFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYG-ITYIPE 286
E P + ++P+ + G D + P +KEY+ P I I +
Sbjct: 241 MDLNWELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKEYIHGGGFAADVPTLQEIVVIED 300
Query: 287 GSHFVQEQFPDLVNQLVIDFVSK 309
HFV ++ P V + DF +K
Sbjct: 301 AGHFVNQEKPQEVTAHINDFFTK 323
>AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376
Length = 375
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 19/322 (5%)
Query: 5 IEHSYLPIRGLKLHIAH---IGKGEAATLLFVHGFPEVWYSWRHQMIXXXXXXXXXXXLD 61
+EH L + G+ +H+A G GE +LF+HGFPE+WY+WRHQM+ D
Sbjct: 54 VEHKTLKVNGINMHVAEKPGSGSGEDPIILFLHGFPELWYTWRHQMVALSSLGYRTIAPD 113
Query: 62 FPGYGLSEPPADLTQASWQGLMNDLLAILDSLS--IPKVFLVAKDFGVKPAYDLALCHPD 119
GYG +E P + ++ + D++A++D+++ V +V D+G A+ L P+
Sbjct: 114 LRGYGDTEAPEKVEDYTYLNVDGDVVALIDAVTGGDKAVSVVGHDWGAMIAWQLCQYRPE 173
Query: 120 RVCGIVSLGV------PPLVESLSFSGL-PEGFYIHRWREPGRAEADFGRFDTRRILRTI 172
+V +V++ V P V + + + +Y+ R+++ G E +F + T +L+
Sbjct: 174 KVKALVNMSVLFSPRNPVRVPVPTLRHVFGDDYYVCRFQKAGEIETEFKKLGTENVLKEF 233
Query: 173 YILFSRSEIPVAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPYRTK 232
+ + + K + + ++ +P W T+EDL Y YE G I YR
Sbjct: 234 LTYKTPGPLNLPKD-KYFKRSENAASALPLWLTQEDLDYYVTKYENKGFTGPINY-YRNI 291
Query: 233 AAKAEGANP----RFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPEG- 287
E P + +P+ I+G +D FP KEY++ K P T + +G
Sbjct: 292 DRNWELTAPWTGAKIRVPVKFIIGDQDLTYNFPGAKEYINGGGFKRDVPLLDETVVLKGL 351
Query: 288 SHFVQEQFPDLVNQLVIDFVSK 309
HF+ E+ PD++NQ + +F K
Sbjct: 352 GHFLHEENPDVINQHIHNFFHK 373
>AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321
Length = 320
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 159/320 (49%), Gaps = 18/320 (5%)
Query: 5 IEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWRHQMIXXXXXXXXXXXLDFPG 64
+EH + G+ +H+A G + +L +HGFPE+WYSWRHQ+ D G
Sbjct: 1 MEHRNVRGNGIDIHVAIQGPSDGTIVLLLHGFPELWYSWRHQISGLAARGYRAVAPDLRG 60
Query: 65 YGLSEPPADLTQASWQGLMNDLLAILDSL--SIPKVFLVAKDFGVKPAYDLALCHPDRVC 122
YG S+ PA+++ + ++ DL+A++ +L KVF+V D+G A+ L L PD+V
Sbjct: 61 YGDSDAPAEISSFTCFNIVGDLVAVISTLIKEDKKVFVVGHDWGALIAWYLCLFRPDKVK 120
Query: 123 GIVSLGVP-------PLVESLSFSGLPEG--FYIHRWREPGRAEADFGRFDTRRILRTIY 173
+V+L VP P V+ + G +Y+ R++E G EA+ T R+++
Sbjct: 121 ALVNLSVPLSFWPTDPSVKPVDRMRAVYGNDYYVCRFQEVGDIEAEIAEVGTERVMKR-- 178
Query: 174 ILFSRSEIP-VAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPYRTK 232
+L R+ P + + + E+ P+P W TEED++ + +++ G +
Sbjct: 179 LLTYRTPGPLIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFKEKGFCGPVNYYRNFN 238
Query: 233 AAK---AEGANPRFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPEG-S 288
+ ++P ++G+ D + P +KEY+ + KE P + EG +
Sbjct: 239 RNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLIEEPVVMEGVA 298
Query: 289 HFVQEQFPDLVNQLVIDFVS 308
HF+ ++ P + Q+++DF+S
Sbjct: 299 HFLNQEKPQEILQIILDFIS 318
>AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305
Length = 304
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 36/321 (11%)
Query: 1 MDQRIEHSYLPIRGLKLHIAHIGKGEAAT-------LLFVHGFPEVWYSWRHQMIXXXXX 53
MD +HS++ + G+ +H+A A +LF+HGFPE+WY+WRHQM+
Sbjct: 1 MDLTFDHSFVKVNGITMHVAEKSPSVAGNGAIRPPVILFLHGFPELWYTWRHQMVALSSL 60
Query: 54 XXXXXXLDFPGYGLSEPPADLTQASWQGLMNDLLAILDSL--SIPKVFLVAKDFGVKPAY 111
D GYG ++ P + + ++ DL+ ++D++ KVF+V D+G A+
Sbjct: 61 GYRTIAPDLRGYGDTDAPESVDAYTSLHVVGDLIGLIDAVVGDREKVFVVGHDWGAIIAW 120
Query: 112 DLALCHPDRVCGIVSLGVPPLVESLSFSGLPEGFYIHRWREPGRAEADFGRF--DTRRIL 169
L L PDRV +V++ V W + + F F D I
Sbjct: 121 HLCLFRPDRVKALVNMSV----------------VFDPWNPKRKPTSTFKAFYGDDYYIC 164
Query: 170 RTIYILFSRSEIPVAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEKSGLMTAIQIPY 229
R F EI + + D+S +P W T+ D+ Y YEK+G +
Sbjct: 165 R-----FQLLEILIKIHVCIVGKRYDDSVSLPSWLTDSDVKYYVSKYEKNGFTGPVNYYR 219
Query: 230 ---RTKAAKAEGANPRFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIAPDYGITYIPE 286
RT +N + ++P+ I+G +D P K+Y+ + K P + +
Sbjct: 220 NMDRTWELMGSLSNAKVKVPVKFIIGDQDLTYHIPGSKKYIHDGRFKSHVPLLDEVVVIK 279
Query: 287 G-SHFVQEQFPDLVNQLVIDF 306
G HF+ E+ PD +++ + D+
Sbjct: 280 GVGHFIHEERPDEISKHIHDY 300
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.140 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,823,334
Number of extensions: 278285
Number of successful extensions: 608
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 578
Number of HSP's successfully gapped: 8
Length of query: 311
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 213
Effective length of database: 8,419,801
Effective search space: 1793417613
Effective search space used: 1793417613
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)