BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0466700 Os10g0466700|AK120324
         (140 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04400.1  | chr3:1167339-1168308 FORWARD LENGTH=141            277   1e-75
AT2G33370.1  | chr2:14143718-14144644 REVERSE LENGTH=141          277   1e-75
AT1G04480.1  | chr1:1216110-1217257 FORWARD LENGTH=141            277   1e-75
ATCG00780.1  | chrC:80696-81064 REVERSE LENGTH=123                 67   4e-12

>AT3G04400.1 | chr3:1167339-1168308 FORWARD LENGTH=141
          Length = 140

 Score =  277 bits (709), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 136/140 (97%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140



>AT2G33370.1 | chr2:14143718-14144644 REVERSE LENGTH=141
          Length = 140

 Score =  277 bits (709), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 136/140 (97%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140



>AT1G04480.1 | chr1:1216110-1217257 FORWARD LENGTH=141
          Length = 140

 Score =  277 bits (709), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 136/140 (97%), Positives = 140/140 (100%)

Query: 1   MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 121 IGKECADLWPRIASAANAIV 140
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140



>ATCG00780.1 | chrC:80696-81064 REVERSE LENGTH=123
          Length = 122

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 8/115 (6%)

Query: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIV 82
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNR----RYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 63

Query: 83  RQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 136
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A
Sbjct: 64  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLA 118



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,977,849
Number of extensions: 115675
Number of successful extensions: 220
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 6
Length of query: 140
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 52
Effective length of database: 8,693,961
Effective search space: 452085972
Effective search space used: 452085972
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 106 (45.4 bits)