BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0464000 Os10g0464000|AK103475
(292 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62740.1 | chr5:25201320-25202535 FORWARD LENGTH=287 449 e-127
AT3G01290.1 | chr3:88252-89356 REVERSE LENGTH=286 439 e-124
AT1G69840.1 | chr1:26293932-26295150 REVERSE LENGTH=287 425 e-119
AT5G51570.1 | chr5:20949511-20951234 FORWARD LENGTH=293 318 3e-87
AT5G54100.1 | chr5:21954035-21956500 REVERSE LENGTH=402 52 3e-07
AT4G27585.1 | chr4:13766984-13769832 REVERSE LENGTH=412 50 1e-06
>AT5G62740.1 | chr5:25201320-25202535 FORWARD LENGTH=287
Length = 286
Score = 449 bits (1154), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/280 (76%), Positives = 243/280 (86%)
Query: 8 IGKLLCCVQVDQSTVGIKERFGKYEEVLDPGCHCVPWIIGSRVAGELTLRLRQLDVRCET 67
+G L CCVQVDQSTV IKE FGK+E+VL+PGCH +PW +GS+VAG L+LR++QLDVRCET
Sbjct: 1 MGNLFCCVQVDQSTVAIKETFGKFEDVLEPGCHFLPWCLGSQVAGYLSLRVQQLDVRCET 60
Query: 68 KTKDNVFVTVVASIQYRAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAFLQ 127
KTKDNVFV VVASIQYRA+ +KA+DAYYKLSN + QIQ+YVFDVIRAS+PKL LDD F Q
Sbjct: 61 KTKDNVFVNVVASIQYRALANKANDAYYKLSNTRGQIQAYVFDVIRASVPKLLLDDVFEQ 120
Query: 128 KNEIARAVEEELEKAMLAYGYEIVQTLIVDIEPDEKVKRAMNEINAAARLRVXXXXXXXX 187
KN+IA+AVEEELEKAM AYGYEIVQTLIVDIEPDE VKRAMNEINAAAR+R+
Sbjct: 121 KNDIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEA 180
Query: 188 XXXXXXXXXXGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSGNVPGTSAKDVMDLVLLT 247
GEAE+KYLSGLGIARQRQAIVDGLRDSVLGF+ NVPGT+AKDVMD+VL+T
Sbjct: 181 EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAVNVPGTTAKDVMDMVLVT 240
Query: 248 QYFDTMKEIGSTSKSSAIFLPHGPGAVADIASQIRDGCLQ 287
QYFDTMKEIG++SKSSA+F+PHGPGAV D+ASQIRDG LQ
Sbjct: 241 QYFDTMKEIGASSKSSAVFIPHGPGAVRDVASQIRDGLLQ 280
>AT3G01290.1 | chr3:88252-89356 REVERSE LENGTH=286
Length = 285
Score = 439 bits (1130), Expect = e-124, Method: Compositional matrix adjust.
Identities = 203/283 (71%), Positives = 243/283 (85%)
Query: 8 IGKLLCCVQVDQSTVGIKERFGKYEEVLDPGCHCVPWIIGSRVAGELTLRLRQLDVRCET 67
+G L CCV V QS V +KERFGK+++VL+PG VPW+IG VAG LTLRL+QLDV+CET
Sbjct: 1 MGNLFCCVLVKQSDVAVKERFGKFQKVLNPGLQFVPWVIGDYVAGTLTLRLQQLDVQCET 60
Query: 68 KTKDNVFVTVVASIQYRAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAFLQ 127
KTKDNVFVTVVASIQYR + DKASDA+Y+LSNP +QI++YVFDVIRA +PKL LDD F Q
Sbjct: 61 KTKDNVFVTVVASIQYRVLADKASDAFYRLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQ 120
Query: 128 KNEIARAVEEELEKAMLAYGYEIVQTLIVDIEPDEKVKRAMNEINAAARLRVXXXXXXXX 187
KNEIA++VEEEL+KAM AYGYEI+QTLI+DIEPD++VKRAMNEINAAAR+RV
Sbjct: 121 KNEIAKSVEEELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNEINAAARMRVAASEKAEA 180
Query: 188 XXXXXXXXXXGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSGNVPGTSAKDVMDLVLLT 247
GEAE+KYLSGLGIARQRQAIVDGLRDSVLGF+GNVPGTSAKDV+D+V++T
Sbjct: 181 EKIIQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAGNVPGTSAKDVLDMVMMT 240
Query: 248 QYFDTMKEIGSTSKSSAIFLPHGPGAVADIASQIRDGCLQAHQ 290
QYFDTM++IG+TSKSSA+F+PHGPGAV+D+A+QIR+G LQA+
Sbjct: 241 QYFDTMRDIGATSKSSAVFIPHGPGAVSDVAAQIRNGLLQANN 283
>AT1G69840.1 | chr1:26293932-26295150 REVERSE LENGTH=287
Length = 286
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 199/282 (70%), Positives = 238/282 (84%)
Query: 8 IGKLLCCVQVDQSTVGIKERFGKYEEVLDPGCHCVPWIIGSRVAGELTLRLRQLDVRCET 67
+G+ L C+QVDQS V IKE FGK++EVL+PGCHC+PW +GS+VAG L+LR++QLDVRCET
Sbjct: 1 MGQALGCIQVDQSNVAIKETFGKFDEVLEPGCHCLPWCLGSQVAGHLSLRVQQLDVRCET 60
Query: 68 KTKDNVFVTVVASIQYRAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAFLQ 127
KTKDNVFVTVVASIQYRA+ + A DA+YKLSN ++QIQ+YVFDVIRAS+PKL+LD F Q
Sbjct: 61 KTKDNVFVTVVASIQYRALAESAQDAFYKLSNTRNQIQAYVFDVIRASVPKLDLDSTFEQ 120
Query: 128 KNEIARAVEEELEKAMLAYGYEIVQTLIVDIEPDEKVKRAMNEINAAARLRVXXXXXXXX 187
KN+IA+ VE ELEKAM YGYEIVQTLIVDIEPD VKRAMNEINAA+R+R
Sbjct: 121 KNDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEA 180
Query: 188 XXXXXXXXXXGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSGNVPGTSAKDVMDLVLLT 247
GEAE+KYLSG+GIARQRQAIVDGLR+SVL FS +VPGTS+KDVMD+VL+T
Sbjct: 181 EKILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVT 240
Query: 248 QYFDTMKEIGSTSKSSAIFLPHGPGAVADIASQIRDGCLQAH 289
QYFDT+KEIG++SKS+++F+PHGPGAV DIASQIRDG LQ +
Sbjct: 241 QYFDTLKEIGASSKSNSVFIPHGPGAVRDIASQIRDGLLQGN 282
>AT5G51570.1 | chr5:20949511-20951234 FORWARD LENGTH=293
Length = 292
Score = 318 bits (814), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 149/283 (52%), Positives = 206/283 (72%), Gaps = 2/283 (0%)
Query: 8 IGKLLCCVQ--VDQSTVGIKERFGKYEEVLDPGCHCVPWIIGSRVAGELTLRLRQLDVRC 65
+G C + ++Q++VG+ ER+G++E + +PGCH + G +AG L+ R++ LDV+
Sbjct: 1 MGNTYCILGGCIEQASVGVVERWGRFEHIAEPGCHFFNPLAGQWLAGVLSTRIKSLDVKI 60
Query: 66 ETKTKDNVFVTVVASIQYRAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAF 125
ETKTKDNVFV +V SIQYR ++ A DA+Y+L NPK QIQ+YVFDV+RA +P + LD F
Sbjct: 61 ETKTKDNVFVQLVCSIQYRVVKASADDAFYELQNPKEQIQAYVFDVVRALVPMMTLDALF 120
Query: 126 LQKNEIARAVEEELEKAMLAYGYEIVQTLIVDIEPDEKVKRAMNEINAAARLRVXXXXXX 185
QK E+A++V EELEK M AYGY I L+VDI PD V++AMNEINAA RL++
Sbjct: 121 EQKGEVAKSVLEELEKVMGAYGYSIEHILMVDIIPDPSVRKAMNEINAAQRLQLASVYKG 180
Query: 186 XXXXXXXXXXXXGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSGNVPGTSAKDVMDLVL 245
EAEAKYL G+G+ARQRQAI DGLR+++L FS V GTSAK+VMDL++
Sbjct: 181 EAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSDKVEGTSAKEVMDLIM 240
Query: 246 LTQYFDTMKEIGSTSKSSAIFLPHGPGAVADIASQIRDGCLQA 288
+TQYFDT++++G++SK++ +FLPHGPG V DI+ QIR+G ++A
Sbjct: 241 ITQYFDTIRDLGNSSKNTTVFLPHGPGHVRDISDQIRNGMMEA 283
>AT5G54100.1 | chr5:21954035-21956500 REVERSE LENGTH=402
Length = 401
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 26 ERFGKYEEVLDPGCH-CVPWIIGSRVAGELTLRLRQLDVRCETK-TKDNVFVTVVASIQY 83
ERFGK+ L G H VP++ R+A +L+ + + +T TKDNV + + +
Sbjct: 118 ERFGKFHTTLPAGIHFLVPFV--DRIAYVHSLKEEAIPIGNQTAITKDNVSIHIDGVLYV 175
Query: 84 RAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAFLQKNEIARAVEEELEKAM 143
+ ++ K A Y + NP + +R+ + K+ LD F +++ + + E + A
Sbjct: 176 KIVDPKL--ASYGVENPIYAVMQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAA 233
Query: 144 LAYGYEIVQTLIVDIEPDEKVKRAMNEINAAA 175
+G + ++ I DI P V+ AM E+ A A
Sbjct: 234 KDWGLQCLRYEIRDIMPPNGVRVAM-EMQAEA 264
>AT4G27585.1 | chr4:13766984-13769832 REVERSE LENGTH=412
Length = 411
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 7/152 (4%)
Query: 26 ERFGKYEEVLDPGCH-CVPWIIGSRVAGELTLRLRQLDVRCETK-TKDNVFVTVVASIQY 83
ERFGKY L G H +P++ R+A +L+ + + +T TKDNV + + +
Sbjct: 75 ERFGKYATTLPSGIHFLIPFV--DRIAYVHSLKEEAIPIPNQTAITKDNVSIHIDGVLYV 132
Query: 84 RAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAFLQKNEIARAVEEELEKAM 143
+ ++ K A Y + +P + +R+ + K+ LD F +++ + + E + A
Sbjct: 133 KIVDPKL--ASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEERDTLNEKIVEAINVAA 190
Query: 144 LAYGYEIVQTLIVDIEPDEKVKRAMNEINAAA 175
+G + ++ I DI P V+ AM E+ A A
Sbjct: 191 KDWGLQCLRYEIRDIMPPHGVRAAM-EMQAEA 221
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,307,150
Number of extensions: 192765
Number of successful extensions: 540
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 538
Number of HSP's successfully gapped: 6
Length of query: 292
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 194
Effective length of database: 8,419,801
Effective search space: 1633441394
Effective search space used: 1633441394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)