BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0456500 Os10g0456500|AK066867
         (845 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G53180.1  | chr3:19707068-19711188 FORWARD LENGTH=853         1027   0.0  

>AT3G53180.1 | chr3:19707068-19711188 FORWARD LENGTH=853
          Length = 852

 Score = 1027 bits (2656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/829 (60%), Positives = 620/829 (74%), Gaps = 19/829 (2%)

Query: 32  SAFPFLRCFSEXXXXXXXXXXPHTLSFKRSLRDIAALYNCEASLEKVEEFRRAEGLSSIS 91
           S+FPF+  FSE          PH+LSFKR+LR+IA LY  E SLE VEE R+  GL S +
Sbjct: 28  SSFPFIGTFSEAAGDALTFA-PHSLSFKRNLREIAQLYGTEVSLEAVEEHRKTSGLDSFT 86

Query: 92  SKCFKAANLSAILIDDGIDFDKMLELEAHKAFAPTVGRILRIEKLAETIINDE------- 144
           SKCFK A +SA+LIDDG+  DK  ++E H+ F P VGR+LRIE LAE I+ +E       
Sbjct: 87  SKCFKEARISALLIDDGLKLDKKHDIEWHRNFVPFVGRVLRIETLAEQILEEECPGGYFY 146

Query: 145 ---SFSASSWTLDSFTEIFVTKLKSVANKIVGLKSIAAYRSGLEIDPNISKTDAEDGLRK 201
              S     W LDSFT+ FV +L S+  +IV LK+IAAYRSGL+ID  +SK  AE+GL +
Sbjct: 147 GSESTEPPVWDLDSFTKTFVERLNSLVPEIVALKTIAAYRSGLDIDTYVSKEVAENGLVE 206

Query: 202 ELSGQRPLRITNKNLIDYLFTCSLEIAVSYHLPMQIHTGFGDKDLDLRKCNPLHLRAVLE 261
            L   +P+RI NK LIDY+ T SLE+AV   LP+QIHTGFGDKDLDLR  NPLHLR +LE
Sbjct: 207 VLRAGKPVRIGNKGLIDYILTISLEVAVRRDLPLQIHTGFGDKDLDLRLSNPLHLRTLLE 266

Query: 262 DTRFSKCQIVLLHASYPFSKEASYLASVYSQVYLDFGLAIPKLSVQGMTSSIKELLELAP 321
           D RF KC+IVLLHA+YPFSKEAS+L+SVY QVYLDFGLA+PKLSV GM SS+KELL+LA 
Sbjct: 267 DKRFGKCRIVLLHAAYPFSKEASFLSSVYPQVYLDFGLAVPKLSVHGMVSSVKELLDLAS 326

Query: 322 IKKVMFSTDGYAFPETYYLGARRARDVVYRVLSAACEDGDLSIQEAIEAVEDIFRRNALY 381
           IKKVMFSTDGYA PETYYLGA++AR+V++ VLS AC  GDLS+ EAI+A +DIF RN++ 
Sbjct: 327 IKKVMFSTDGYASPETYYLGAKKAREVIFLVLSDACASGDLSLMEAIDAAKDIFSRNSIG 386

Query: 382 LYKLNVANGSVGQITAIADNGIPLSEQDVL-----FVRVVWIDTSGQHRCRVVPAGRFYE 436
            YKLN+   S      I+   + + E DV      FVR++W+DTSGQ RCR V A RF  
Sbjct: 387 FYKLNIDTDSSSPQNIISPK-LKIKEPDVQEDSSSFVRIIWVDTSGQQRCRAVQAQRFNR 445

Query: 437 IARKKGIGLTFASMGMTSFTDGPADGTNLTGVGEIRLMPDMSTLLRLPWSRREEMVMAEM 496
             +K G+GLTFASMGMTSFTDGPA+ + LTGVGEIRL+PD+ST   +PW+++E MV+A+M
Sbjct: 446 SVKKNGVGLTFASMGMTSFTDGPAEESKLTGVGEIRLVPDLSTKQTIPWTKQESMVLADM 505

Query: 497 HIRPGEAWEYCPRNTLRKVTKVLLDEFNVTMMAGFENEFFLRKKVVSGEKELWVPFDNTP 556
            ++PGEAW YCPR TLR+V KVL DEF++ M AGFENEF+L K VV   KE ++PFD  P
Sbjct: 506 QLKPGEAWGYCPRETLRRVAKVLKDEFDLVMNAGFENEFYLLKNVVREGKEEYMPFDFGP 565

Query: 557 YCSTTAFDGASSVLQEVYTSLKAAEIVVEQLHAESGKGQFEIALKYVLCTLAADKLIYAR 616
           YC+T++FD AS +  ++  +L++  I VEQ HAESGKGQFE++L + + + AAD L+Y R
Sbjct: 566 YCATSSFDAASPIFHDIVPALESLNIEVEQFHAESGKGQFEVSLGHTIASHAADNLVYTR 625

Query: 617 EIIKSVARKHGLLATFLPKPDLNDIGSGSHVHLSLWEFDQNVFMGSSEYNYYGMSRIGES 676
           E+I+SVARK GLLATF+PK D  DIGSGSHVHLSLW+  +NVF  S+  + +G+S +GE 
Sbjct: 626 EVIRSVARKQGLLATFVPKYDYCDIGSGSHVHLSLWKNGENVFPASNNSSSHGISSVGEE 685

Query: 677 FLAGVYLHLPSILAFTAPHPNSYNRIQPNTWSGAYQCWGKENREAPLRTACPPGIPLDLV 736
           F+AGV  HLPSILA  AP PNSY+RIQPNTWSGA+QCWGKENREA LR A PPG P  LV
Sbjct: 686 FMAGVLFHLPSILAIIAPLPNSYDRIQPNTWSGAFQCWGKENREAALRAASPPGTPDGLV 745

Query: 737 SNFEIKSFDACANPHLGLAAIVAAGIDGLRRSLTLPEPTESNPAGYASNSKLKRMPKDLM 796
           +NFEIKSFD  ANPHLGLA I+AAGIDGLRR L LP P + NPA  A+   L R+P+ L 
Sbjct: 746 TNFEIKSFDGSANPHLGLAVIMAAGIDGLRRHLQLPTPIDINPADVAAT--LNRLPETLS 803

Query: 797 ESVEALAADKIMHELIGDKLVTAVIAVRKAEIDHYEKNPAAFADLIHRY 845
           E+VEAL  DK++H+L+G KL+ A+  VRKAE+++Y KNP A+  LIHRY
Sbjct: 804 EAVEALDKDKVLHDLLGQKLLVAIKGVRKAEVEYYSKNPDAYKQLIHRY 852



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,417,517
Number of extensions: 743965
Number of successful extensions: 1635
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1633
Number of HSP's successfully gapped: 1
Length of query: 845
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 738
Effective length of database: 8,173,057
Effective search space: 6031716066
Effective search space used: 6031716066
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)