BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0437600 Os10g0437600|AF383878
(749 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01180.1 | chr3:62456-65678 REVERSE LENGTH=793 850 0.0
AT5G24300.1 | chr5:8266934-8270860 FORWARD LENGTH=653 461 e-130
AT1G32900.1 | chr1:11920582-11923506 REVERSE LENGTH=611 343 2e-94
AT4G18240.1 | chr4:10082221-10087044 FORWARD LENGTH=1041 213 3e-55
AT1G11720.2 | chr1:3951597-3956840 FORWARD LENGTH=1095 201 2e-51
>AT3G01180.1 | chr3:62456-65678 REVERSE LENGTH=793
Length = 792
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/542 (71%), Positives = 455/542 (83%), Gaps = 1/542 (0%)
Query: 208 LQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAEC 267
L YL + P Q+ + T+ Y + ++ + + P A +++N+ILVAAEC
Sbjct: 252 LPSYLTKAP-QTSTMKTEKYVEKTPDVASSETNEPGKDEEKPPPLAGANVMNVILVAAEC 310
Query: 268 APWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIY 327
AP+SKTGGLGDVAGALPK+LARRGHRVMVVVP Y YAE + LG +RY+VAGQDMEV+Y
Sbjct: 311 APFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYKVAGQDMEVMY 370
Query: 328 YHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGD 387
+HA+IDGVDFVFID+P F H+ N+IYGG+R DILKRMVL CKAA+EVPWYVPCGG CYGD
Sbjct: 371 FHAFIDGVDFVFIDSPEFRHLSNNIYGGNRLDILKRMVLFCKAAVEVPWYVPCGGVCYGD 430
Query: 388 GNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVD 447
GNL F+ANDWHTALLPVYLKAYY D+G M Y RSVLVIHNIAHQGRGP+DDFSY+DLP
Sbjct: 431 GNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQGRGPVDDFSYVDLPSH 490
Query: 448 YMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINESDWKF 507
Y+D FKLYDP GG+H NIFAAG+KAADR+LTVSHGY+WE+KT EGGWGLH IINE+DWKF
Sbjct: 491 YLDSFKLYDPVGGEHFNIFAAGLKAADRVLTVSHGYSWEVKTLEGGWGLHNIINENDWKF 550
Query: 508 QGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIA 567
+GIVNGIDT +WNP D +L SD YTNYSLE + GK QCKAALQKELGLPVR DVP+I
Sbjct: 551 RGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQCKAALQKELGLPVRPDVPLIG 610
Query: 568 FIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFS 627
FIGRLDHQKGVDLIAEA+PW+ QDVQL+MLGTGR DLE+ LR++E Q+ D+ RGWVGFS
Sbjct: 611 FIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGRPDLEEVLRQMEHQYRDKARGWVGFS 670
Query: 628 IRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGL 687
++ AHR+TAGADILLMPSRFEPCGLNQLYAM YGT+PVVHAVGGLRDTV+ ++PY E+GL
Sbjct: 671 VKTAHRITAGADILLMPSRFEPCGLNQLYAMNYGTIPVVHAVGGLRDTVQQFDPYSETGL 730
Query: 688 GWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLLAAKY 747
GWTF+ AEA +LI ALG+CL TYR Y+ SWEGLQ+RGM QDLSWDNAA+ YEEVL+AAKY
Sbjct: 731 GWTFDSAEAGKLIHALGNCLLTYREYKESWEGLQRRGMTQDLSWDNAAEKYEEVLVAAKY 790
Query: 748 QW 749
W
Sbjct: 791 HW 792
>AT5G24300.1 | chr5:8266934-8270860 FORWARD LENGTH=653
Length = 652
Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/535 (46%), Positives = 330/535 (61%), Gaps = 37/535 (6%)
Query: 239 QSVAEGTSD--DPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMV 296
++V EG ++ PS A V + N++ V +E AP+SKTGGLGDV G+LP ALA RGHRVMV
Sbjct: 122 RAVEEGAAEVGIPSGKAEV-VNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMV 180
Query: 297 VVPMY-------KNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVE 349
+ P Y KNYA + LG G EV +YH Y DGVD+VF+D+ +H
Sbjct: 181 ISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPG 240
Query: 350 NDIYG---GDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYL 406
N YG G D R LLC AA E P +P GG+ YG+ +L FL NDWH L+P+ L
Sbjct: 241 NP-YGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSL-FLVNDWHAGLVPILL 298
Query: 407 KAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPF-------- 458
A Y G ARS+L+IHN+AHQG P ++ L LP ++ P
Sbjct: 299 AAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALD 358
Query: 459 GGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTD 518
G+ +N+ I +DR++TVS GYAWE+ T EGG+GL +++ GI NGI+ +
Sbjct: 359 TGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDE 418
Query: 519 WNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGV 578
WNP D H+ +YS + V K +CK ALQKELGLP+R + P+I FIGRLD+QKG+
Sbjct: 419 WNPSTDEHIP----FHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGI 473
Query: 579 DLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGA 638
DLI A P + D+Q +MLG+G E +R +E + D+ RGWVGF++ ++HR+TAG
Sbjct: 474 DLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGC 533
Query: 639 DILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPY----EESGLGWTFEKA 694
DILLMPSRFEPCGLNQLYAM YGT+PVVH GGLRDTVE++NPY +G GW F
Sbjct: 534 DILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPL 593
Query: 695 EANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLLAAKYQW 749
+ ++ AL TYR Y+ SWEGL +RGM ++ SW+NAA YE+V +QW
Sbjct: 594 SKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQV-----FQW 643
>AT1G32900.1 | chr1:11920582-11923506 REVERSE LENGTH=611
Length = 610
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 209/507 (41%), Positives = 283/507 (55%), Gaps = 26/507 (5%)
Query: 258 INIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQ 317
+++I + AE PWSKTGGLGDV G LP ALA RGHRVM + P Y Y + + +
Sbjct: 84 MSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWDTCVVVQIK 143
Query: 318 VAGQDMEVIYYHAYIDGVDFVFIDNPIF---------HHVENDIYGGDRTDILKRMVLLC 368
V + V ++H Y GVD VF+D+PIF + I G D D R LLC
Sbjct: 144 VGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLC 203
Query: 369 KAAIEVPWYVPCGGYCYGDG----NLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLV 424
+AA+E P + Y G ++VF+ANDWHTALLP YLK+ Y G + A+ V
Sbjct: 204 QAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVYMNAKVVFC 263
Query: 425 IHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYD----PFGGDHLNIFAAGIKAADRLLTVS 480
IHNIA+QGR DD+S L+LP+ + F D P G +N A I A R+LTVS
Sbjct: 264 IHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILEAHRVLTVS 323
Query: 481 HGYAWELKT-AEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLET 539
YA EL + + G LH + GI+NG+D +WNP D ++ Y + T
Sbjct: 324 PYYAQELISGVDRGVELHKYLRMK--TVSGIINGMDVQEWNPSTDKYID----IKYDITT 377
Query: 540 VQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLG 599
V K K ALQ +GLPV DVPVI FIGRL+ QKG D++ EA+ G +VQ+++LG
Sbjct: 378 VTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGLNVQMVILG 437
Query: 600 TGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMM 659
TG++ +E + LE + + G F++ LAH +TAGAD +++PSRFEPCGL QL+AM
Sbjct: 438 TGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGADFIIVPSRFEPCGLIQLHAMR 497
Query: 660 YGTVPVVHAVGGLRDTVEH-YNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTS-W 717
YGTVP+V + GGL DTV+ Y + E + + +I Y TS
Sbjct: 498 YGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVTRAVAVYGTSAM 557
Query: 718 EGLQKRGMMQDLSWDNAAKLYEEVLLA 744
+ + K M QD SW A+L+E+VLL+
Sbjct: 558 QEMVKNCMDQDFSWKGPARLWEKVLLS 584
>AT4G18240.1 | chr4:10082221-10087044 FORWARD LENGTH=1041
Length = 1040
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 244/510 (47%), Gaps = 56/510 (10%)
Query: 260 IILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVA 319
++ +AAE AP +K GGLGDV L KAL R+GH V +++P Y + Q R +
Sbjct: 544 VVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKY----DCMQYDRVRDLRAL 599
Query: 320 GQDMEVIYYHAYIDG----------------VDFVFIDNPIFHHVENDIYGGDRTDILKR 363
+E +Y DG V F+ +P YG D +R
Sbjct: 600 DTVVE-----SYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYG--EQDDFRR 652
Query: 364 MVLLCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALL-PVYLKAYYHDNGFMIYARSV 422
+AA+E+ G + +DW TA + P+Y Y + AR
Sbjct: 653 FSYFSRAALELLLQ-------SGKKPDIIHCHDWQTAFVAPLYWDLYAPKG--LDSARIC 703
Query: 423 LVIHNIAHQGRGPLDDFSYLDLPVDYMDL-FKLYDPFGGDHLNIFAAGIKAADRLLTVSH 481
HN +QG + L V+ ++ ++ D GD +N I ++ + TVS
Sbjct: 704 FTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSP 763
Query: 482 GYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQ 541
YA E++TAEGG GLH +N KF GI+NGIDT WNP D LK+ ++ + +Q
Sbjct: 764 TYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLKA----QFNAKDLQ 819
Query: 542 AGKQQCKAALQKELGL-PVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGT 600
GK++ K AL+K+LGL P++ I RL QKGV LI A+ Q ++LG+
Sbjct: 820 -GKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGS 878
Query: 601 G-----RQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQL 655
+++ E ++ +S +D VR + + L+H + A +D+ ++PS FEPCGL Q+
Sbjct: 879 SPVPHIQREFEGIEQQFKS--HDHVRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQM 936
Query: 656 YAMMYGTVPVVHAVGGLRDTVEHYN----PYEESGLGWTFEKAEANRLIDALGHCLNTYR 711
AM YG++P+ GGL D+V + P + G+TF+ A+ AL N Y+
Sbjct: 937 IAMRYGSIPIARKTGGLNDSVFDIDDDTIPTQFQN-GFTFQTADEQGFNYALERAFNHYK 995
Query: 712 NYRTSWEGLQKRGMMQDLSWDNAAKLYEEV 741
W L ++ M D SW ++A YEE+
Sbjct: 996 KDEEKWMRLVEKVMSIDFSWGSSATQYEEL 1025
>AT1G11720.2 | chr1:3951597-3956840 FORWARD LENGTH=1095
Length = 1094
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 245/524 (46%), Gaps = 84/524 (16%)
Query: 241 VAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPM 300
V G S +P ++I+ +A E AP +K GGLGDV +L +A+ H V +V P
Sbjct: 636 VVGGISKEPP-------LHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPK 688
Query: 301 Y----KNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFID--NPIFHHVENDIYG 354
Y N+ + Q R Y G +++V +H ++G+ F+D N +F +YG
Sbjct: 689 YDCIKHNFVKDLQFN--RSYHWGGTEIKV--WHGKVEGLSVYFLDPQNGLFQR--GCVYG 742
Query: 355 GDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNG 414
D R C AA+E ++ GG+ + D + +DW +A + K +Y G
Sbjct: 743 C--ADDAGRFGFFCHAALE---FLLQGGF-HPD---ILHCHDWSSAPVSWLFKDHYTQYG 793
Query: 415 FMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAAD 474
+I R V IHN+ FG N + AD
Sbjct: 794 -LIKTRIVFTIHNLE----------------------------FGA---NAIGKAMTFAD 821
Query: 475 RLLTVSHGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTN 534
+ TVS YA E+ + +I+ +KF GI+NGID W+P D +
Sbjct: 822 KATTVSPTYAKEVAG-------NSVISAHLYKFHGIINGIDPDIWDPYNDNFIP----VP 870
Query: 535 YSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQ 594
Y+ E V GK+ K LQ LGL D PV+ I RL HQKG+ LI A+ ++ Q
Sbjct: 871 YTSENVVEGKRAAKEELQNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQ 929
Query: 595 LIMLGTG-----RQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEP 649
+++LG+ + D + +L S H DR R + + L+H + AGAD +L+PS FEP
Sbjct: 930 VVLLGSAPDPRIQNDFVNLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEP 989
Query: 650 CGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGL-------GWTFEKAEANRLIDA 702
CGL QL AM YG VPVV GGL DTV + +E G++F+ A+A + A
Sbjct: 990 CGLTQLIAMRYGAVPVVRKTGGLFDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYA 1049
Query: 703 LGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLLAAK 746
L ++ + + R + L K M QD SW+ A Y E+ +A+
Sbjct: 1050 LNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEYLELYHSAR 1093
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,142,695
Number of extensions: 707396
Number of successful extensions: 1671
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1653
Number of HSP's successfully gapped: 6
Length of query: 749
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 643
Effective length of database: 8,200,473
Effective search space: 5272904139
Effective search space used: 5272904139
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)