BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0437500 Os10g0437500|AK107152
(181 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205 130 4e-31
AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227 129 1e-30
AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163 95 2e-20
AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161 92 1e-19
AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172 89 1e-18
AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163 79 2e-15
AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164 70 7e-13
AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176 62 2e-10
AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176 60 9e-10
AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243 54 5e-08
AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161 53 7e-08
AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194 47 8e-06
>AT3G58450.1 | chr3:21622032-21623057 FORWARD LENGTH=205
Length = 204
Score = 130 bits (327), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 7/163 (4%)
Query: 3 VLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMFP 62
V+VA+D+S+ S AL W +DHL +A + G+E + L L+H ++P
Sbjct: 32 VMVAIDESKNSFDALEWAVDHLRVVISAEPETGQEGGL------LTLLHVHPTYLQYIYP 85
Query: 63 VG-PGSAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEPREALCRA 121
G SAVY S+ E +R A+ E+ NL RA IC + EG+P+E +C+A
Sbjct: 86 SGGTASAVYATDSVPEPMRKAREESTTNLFTRALEICRGKMVKTETMILEGDPKEMICQA 145
Query: 122 AEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
E LLVVGSRGLG +KRAFLGSVSDYCA A CPI++V+
Sbjct: 146 VEQTHVDLLVVGSRGLGMIKRAFLGSVSDYCAQHAKCPILIVR 188
>AT3G11930.3 | chr3:3776371-3777393 FORWARD LENGTH=227
Length = 226
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 102/196 (52%), Gaps = 43/196 (21%)
Query: 2 KVLVAVDDSRGSHRALSWVLDH----LFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLH 57
+++VA+D+S S AL WV+DH L AAA + G L ++H P +
Sbjct: 34 RMVVAIDESDSSFYALQWVIDHFSNLLLTTAAAEAESGM----------LTVIHVQSPFN 83
Query: 58 HVM-FPVGPG--SAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEP 114
H FP GPG +AVY ++SM+E+V+ AQ E + LL RA +C + EGE
Sbjct: 84 HFAAFPAGPGGATAVYASSSMIESVKKAQQETSAALLSRALQMCRAKQIRTETLVLEGEA 143
Query: 115 REALCRAAEDAGAGLLVVGSRGLGALK--------------------------RAFLGSV 148
+E +C A E LLVVGSRGLG +K RAFLGSV
Sbjct: 144 KEMICEAVEKMHVDLLVVGSRGLGKIKRYCIINNFFLYINLSAYYFVCFVRFGRAFLGSV 203
Query: 149 SDYCAHRASCPIMVVK 164
SDYCAH A+CPI++VK
Sbjct: 204 SDYCAHHANCPILIVK 219
>AT2G47710.1 | chr2:19555045-19555956 REVERSE LENGTH=163
Length = 162
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 3 VLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMFP 62
++V VDDS S AL W LD F P A P +L +VHA +
Sbjct: 10 MVVGVDDSEQSTYALEWTLDRFFAPYA-----------PNYPFKLFIVHAKPNAVSAVGL 58
Query: 63 VGPGSAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXX-XXXXXXEGEPREALCRA 121
GPG+A ++ V A A ++ +A+ IC+ R EG+ R LC
Sbjct: 59 AGPGTA-----EVVPYVDADLKHTAAKVVEKAKAICQSRSVHGAVIEVFEGDARNILCEV 113
Query: 122 AEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
+ A +LVVGS G GA+KRA LGS SDYCAH A C +M+VK
Sbjct: 114 VDKHHASILVVGSHGYGAIKRAVLGSTSDYCAHHAHCSVMIVK 156
>AT1G68300.1 | chr1:25598518-25599261 REVERSE LENGTH=161
Length = 160
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 2 KVLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMF 61
+V+VA+D+S S RAL W L +L + D +P +L V+A
Sbjct: 11 QVMVAIDESECSKRALQWTLVYL---KDSLADSDIILFTAQPHLDLSCVYA--------- 58
Query: 62 PVGPGSAVYGAA--SMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEPREALC 119
+ YGAA ++ +++ + N L IC G G P+EA+C
Sbjct: 59 ------SSYGAAPIELINSLQESHKNAGLNRLDEGTKICAETGVTPRKVLEFGNPKEAIC 112
Query: 120 RAAEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
AAE G +LVVGS G GAL+R FLGSVS+YC + A CP++VV+
Sbjct: 113 EAAEKLGVDMLVVGSHGKGALQRTFLGSVSNYCVNNAKCPVLVVR 157
>AT1G09740.1 | chr1:3154603-3155834 FORWARD LENGTH=172
Length = 171
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 3 VLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMFP 62
V+VAVD S S AL W LD+L ++++ V++H ++P V
Sbjct: 10 VVVAVDGSEVSMEALRWALDNLKLSSSSS------------DSSFVVLH-VQPSPSVAAG 56
Query: 63 VGPGSAVYGAASMME------AVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEPRE 116
V PG+ +G S +E A+ Q +L A IC + G+P+
Sbjct: 57 VSPGTIPFGGPSGLEVPAFTAAIEQHQKRITDTILEHASQICAEKSVNVKTQVVIGDPKY 116
Query: 117 ALCRAAEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
+C A E+ A LLV+GSR G +KR FLGSVS+YC + A CP++++K
Sbjct: 117 KICEAVENLHADLLVMGSRAYGRIKRMFLGSVSNYCTNHAHCPVVIIK 164
>AT3G62550.1 | chr3:23136194-23137074 FORWARD LENGTH=163
Length = 162
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 2 KVLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMF 61
K++VAVD+S S ALSW LD+LF P + L+L++ PL
Sbjct: 8 KIVVAVDESEESMEALSWSLDNLF-PYGSNN-------------TLILLYVKPPLPVYSS 53
Query: 62 PVGPGSAVYGAASMMEAVRAAQAENARNLLVRARLICE--RRGXXXXXXXXEGEPREALC 119
G V G + A++ + E +++ R+R + + G+ +E +C
Sbjct: 54 LDAAGFIVTGDP--VAALKKYEYELVESVMARSRTVYQDYESDINIERRVGRGDAKEVIC 111
Query: 120 RAAEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
A + +LV+G+ G KRA LGSVS+YCA R CP+++VK
Sbjct: 112 NAVQKLRVDMLVMGTHDYGFFKRALLGSVSEYCAKRVKCPVVIVK 156
>AT3G17020.1 | chr3:5802728-5804063 REVERSE LENGTH=164
Length = 163
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 2 KVLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHH--- 58
++ VAVD S S +ALSW +D+ V R L+L+ +++
Sbjct: 8 RIGVAVDFSDCSKKALSWAIDN----------------VVRDGDHLILITIAHDMNYEEG 51
Query: 59 -------VMFPVGPGSAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXE 111
V P P S AA M + AE + AR ++
Sbjct: 52 EMQLWETVGSPFIPMSEFSDAAVMKKYALKPDAETLDIVNTAAR----KKTITVVMKIYW 107
Query: 112 GEPREALCRAAEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
G+PRE +C AAE LV+G+RGLG LKR +GSVS++ + +CP+ VVK
Sbjct: 108 GDPREKICAAAEQIPLSSLVMGNRGLGGLKRMIMGSVSNHVVNNVACPVTVVK 160
>AT3G01520.1 | chr3:208506-209921 FORWARD LENGTH=176
Length = 175
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 67 SAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEPREALCRAAEDAG 126
++Y + +R + +LL C G G+P++ +C+ +
Sbjct: 65 DSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVR 124
Query: 127 AGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
LVVGSRGLG ++ F+G+VS +C A CP+M +K
Sbjct: 125 PDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIK 162
>AT5G14680.1 | chr5:4731620-4733025 REVERSE LENGTH=176
Length = 175
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 67 SAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEPREALCRAAEDAG 126
++Y + +R +LL C G +G+P E +C
Sbjct: 65 DSIYASPDDFRQMRERNKAKGLHLLEFFVKKCHDIGVGCEAWIRKGDPTELICHEVRRVR 124
Query: 127 AGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
LVVGSRGLG ++ F+G+VS++C A CP++ +K
Sbjct: 125 PDFLVVGSRGLGPFQKVFVGTVSEFCVKHAECPVITIK 162
>AT1G11360.1 | chr1:3822171-3822899 REVERSE LENGTH=243
Length = 242
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 38/178 (21%)
Query: 2 KVLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMF 61
K+ +AVD S S A+ W + + R +VL+H ++P V++
Sbjct: 39 KIGIAVDLSDESAYAVQWAVQNYL----------------RSGDAVVLLH-VQPTS-VLY 80
Query: 62 PVGPGSAVYGAASMMEAVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEP------- 114
A +GA + E+ R L ++ ++ E +
Sbjct: 81 -----GADWGAMDLSPQWDPNNEESQRKLEDDFDIVTNKKASDVAQPLVEADIPFKIHIV 135
Query: 115 -----REALCRAAEDAGAGLLVVGSRGLGALKRAF---LGSVSDYCAHRASCPIMVVK 164
+E LC E G L++GSRG GA KR+ LGSVSDY H +CP++VV+
Sbjct: 136 KDHDMKERLCLEVERLGLSTLIMGSRGFGATKRSSKGRLGSVSDYSVHHCACPVVVVR 193
>AT3G53990.1 | chr3:19989658-19991019 REVERSE LENGTH=161
Length = 160
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 112 GEPREALCRAAEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHRASCPIMVVK 164
G+ RE L A +D +V+GSRGL AL+R +GSVS + A CP+ VVK
Sbjct: 105 GDAREKLVDAVKDLKLDSIVMGSRGLSALQRIIMGSVSSFVIQHAPCPVTVVK 157
>AT2G21620.2 | chr2:9248749-9249986 FORWARD LENGTH=194
Length = 193
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 3 VLVAVDDSRGSHRALSWVLDHLFFPAAATGDGGEEEQVPRPAPELVLVHAIEPLHHVMFP 62
V+VAVD S A W L H R A L LVHA+
Sbjct: 42 VIVAVDHGPNSKHAFDWALVHFC----------------RLADTLHLVHAVS--SSFSLQ 83
Query: 63 VGPGSAVY-GAASMME--AVRAAQAENARNLLVRARLICERRGXXXXXXXXEGEPREALC 119
VY + ++ME AV A Q +++ AR++ EG+ + +C
Sbjct: 84 CVKNDVVYETSQALMEKLAVEAYQVAMVKSV---ARVV-------------EGDAGKVIC 127
Query: 120 RAAEDAGAGLLVVGSRGLGALKRAFLGSVSDYCAHR-ASCPIMVV 163
+ AE ++VG+RG ++ GSVS+YC H S P+++V
Sbjct: 128 KEAEKVKPAAVIVGTRGRSLVRSVLQGSVSEYCFHNCKSAPVIIV 172
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,376,917
Number of extensions: 124813
Number of successful extensions: 261
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 247
Number of HSP's successfully gapped: 14
Length of query: 181
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 89
Effective length of database: 8,584,297
Effective search space: 764002433
Effective search space used: 764002433
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 108 (46.2 bits)