BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0424100 Os10g0424100|Os10g0424100
(285 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407 137 5e-33
AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409 129 2e-30
AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443 123 1e-28
AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416 111 4e-25
AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466 104 5e-23
AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411 102 2e-22
AT4G08455.1 | chr4:5375891-5376922 FORWARD LENGTH=244 58 5e-09
AT2G41370.1 | chr2:17238019-17240203 REVERSE LENGTH=492 52 3e-07
AT3G57130.1 | chr3:21147835-21150027 FORWARD LENGTH=468 52 4e-07
AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738 52 4e-07
AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711 51 9e-07
>AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407
Length = 406
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 107/171 (62%), Gaps = 10/171 (5%)
Query: 65 SMWGGERFIRRDQLEQSEYVRDDRLAIRFDVAVMDKLRTTEEIXXXXXXXVPPSEMSRQF 124
SMWG +RF +R LE S+Y++D+ L +R V V+ K RT E VP S + +QF
Sbjct: 136 SMWGYKRFFKRSLLESSDYLKDNGLLVRCCVGVV-KSRT--EGPRCYNIPVPVSGLGQQF 192
Query: 125 ADLLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANGTIQVDDMDA 184
LL SG GADV F V GET AH+ VLAARS VFRA+LFGP++ I ++D+ A
Sbjct: 193 GKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRS--ENTNCIIIEDVQA 250
Query: 185 EVFRSLLHFVYTDSLPPE---TGTPREGAA--MAQHLIVAADRYDLERLKA 230
+F+ LLHF+Y D +P GT + A+ +AQHL+ AADRY LERL+
Sbjct: 251 PIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLRT 301
>AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409
Length = 408
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 99/170 (58%), Gaps = 10/170 (5%)
Query: 65 SMWGGERFIRRDQLEQSEYVRDDRLAIRFDVAVMDKLRTTEEIXXXXXXXVPPSEMSRQF 124
SMWG +RF +R LE S+Y++DD L I V V+ R E +P S M +
Sbjct: 128 SMWGYKRFFKRSALETSDYLKDDCLVINCTVGVV---RARLEGPKQYGIVLPLSNMGQGL 184
Query: 125 ADLLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANGTIQVDDMDA 184
DLL S G D+ F+VG ET AH+ +LAARS VFRA+ FGP+ G I +DD++
Sbjct: 185 KDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPI--GNNNVDRIVIDDIEP 242
Query: 185 EVFRSLLHFVYTDSLPPE---TGTPREGA--AMAQHLIVAADRYDLERLK 229
+F+++L F+YTD LP TG+ + M QHL+ AAD YDL RLK
Sbjct: 243 SIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLK 292
>AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443
Length = 442
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 103/206 (50%), Gaps = 45/206 (21%)
Query: 65 SMWGGERFIRRDQLEQSEYVRDDRLAIRFDVAVMDKLRTTEEIXXXXXXXVPPSEMSRQF 124
SMWG +RF RR LE S+Y++++ L +R V V+ ++ E VP S + +Q
Sbjct: 137 SMWGYKRFFRRSSLESSDYLKENSLLVRCRVGVV---KSVTEGPRYYNIPVPVSNLGQQL 193
Query: 125 ADLLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANGTIQVDDMDA 184
+LL SG G DV F+V GET AH+ VLA RS VF A+LFGP+ G I ++DM+A
Sbjct: 194 GNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPL--GDRNTKCITIEDMEA 251
Query: 185 EVF-----------------------------------RSLLHFVYTDSLPPE-----TG 204
+F + LLHF+Y D LP T
Sbjct: 252 PIFKVLPLTLLLIVYSRMYHPGSSPGALLLFSSLLTRDKVLLHFIYWDELPDMQELIGTD 311
Query: 205 TPREGAAMAQHLIVAADRYDLERLKA 230
+ +AQHL+ AADRY LERLKA
Sbjct: 312 STLASTLVAQHLLAAADRYALERLKA 337
>AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416
Length = 415
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 17/176 (9%)
Query: 65 SMWGGERFIRRDQLEQSEYVRDDRLAIRFDVAVMDKLRTTEEIXXXXXXXVPPSEMSRQF 124
SMWG +RF RR LE S+Y++DD L I V V+ + VP SE+ F
Sbjct: 139 SMWGYKRFFRRSLLETSDYLKDDCLKINCTVGVV---VSEMHCPRLLSIHVPDSELGSHF 195
Query: 125 ADLLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANGTIQVDDMDA 184
LL + G+DV F V GE AH+ VLAARS+ FR+ + + E N + + D++
Sbjct: 196 GKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAEN---NSDVVISDLEP 252
Query: 185 EVFRSLLHFVYTDSLP----PETGT------PRE-GAAMAQHLIVAADRYDLERLK 229
+VF++LLHF+Y DSLP P T P E + L+ AA+ Y+L RL+
Sbjct: 253 KVFKALLHFMYKDSLPGDVEPLTAHSFDLLRPSEIDDTLIVKLLAAAEMYNLSRLR 308
>AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466
Length = 465
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 32 FTVSLLDELGRPGWSYRXXXXXXXXXXXXXEEY--SMWGGERFIRRDQLEQSEYVRDDRL 89
F +SLLD+ G+ +Y SMWG +RF RR LE S++++DD L
Sbjct: 115 FELSLLDQSGKGKHKVHSHFDRALESGPYTLKYRGSMWGYKRFFRRLMLETSDFLKDDCL 174
Query: 90 AIRFDVAVMDKLRTTEEIXXXXXXXVPPSEMSRQFADLLASGDGADVEFRVGGETVAAHR 149
I V V+ + + VP S++ F LL + DG+D+ F V GE AHR
Sbjct: 175 KINCTVGVV---VSEIDCPRLHSIHVPASDIGSHFGMLLENEDGSDITFNVSGEKFRAHR 231
Query: 150 AVLAARSRVFRAELFGPMKEGVAANGTIQVDDMDAEVFRSLLHFVYTDSLPPETGTPREG 209
VLAARS VF +E E + I+V DM+ +VF++LLH++Y D+L + +
Sbjct: 232 LVLAARSPVFESEFLDVTGE---EDRDIEVTDMEPKVFKALLHYIYKDALIEDAESSSSS 288
Query: 210 A---------AMAQHLIVAADRYDLERL 228
+A L+ AAD+Y L RL
Sbjct: 289 GSSVGPSASDTLAAKLLGAADKYKLPRL 316
>AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411
Length = 410
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 21/178 (11%)
Query: 65 SMWGGERFIRRDQLEQSEYVRDDRLAIRFDVAVMDKLRTTEEIX--XXXXXXVPPSEMSR 122
SMWG +RF RR LE S+Y++DD L I V V+ EI VP SE+
Sbjct: 132 SMWGYKRFFRRSILETSDYLKDDCLIINCTVGVV-----VSEILCPQLHSVHVPDSELGS 186
Query: 123 QFADLLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANGTIQVDDM 182
F LL S +G+D+ F + GE AH+ VLAARS F+++ E A N + ++D+
Sbjct: 187 HFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSK---FFSEFEANNTEVTINDL 243
Query: 183 DAEVFRSLLHFVYTDSLP----PETGTPREGAAMAQ-------HLIVAADRYDLERLK 229
+ +VF++LL F+Y DSLP P T E +++ ++ AAD+YDL RL+
Sbjct: 244 EPKVFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVKVLAAADKYDLIRLR 301
>AT4G08455.1 | chr4:5375891-5376922 FORWARD LENGTH=244
Length = 243
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 17/115 (14%)
Query: 118 SEMSRQFAD--LLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANG 175
S SR F D L+AS D A G + AH++VL +RS VF+A L M+E ++ G
Sbjct: 57 SSTSRSFTDVVLIASEDNA------GSPPIPAHKSVLVSRSPVFKAMLENEMEESLS--G 108
Query: 176 TIQVDDMDAEVFRSLLHFVYTDSLPPETGTPREGAAMAQHLIVAADRYDLERLKA 230
TI++ D+ + R+ ++++YT E + MA L+V +++Y ++ LK+
Sbjct: 109 TIKISDVSYDALRTFVYYLYT----AEACLDEQ---MACDLLVMSEKYQVKHLKS 156
>AT2G41370.1 | chr2:17238019-17240203 REVERSE LENGTH=492
Length = 491
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 120 MSRQFADLLASGDG-ADVEFRVGGETVAAHRAVLAARSRVFRAELFG------------- 165
+S F +LL +G +DV F V G V AHR +LAARS FR G
Sbjct: 11 LSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPVTGIDPT 70
Query: 166 --------PMKEGVAANGTIQVDDMDAEVFRSLLHFVYTD--SLPPETGTPR 207
P + A G I V+ + EVF LL F+Y+ S+ P+ PR
Sbjct: 71 QHGSVPASPTRGSTAPAGIIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPR 122
>AT3G57130.1 | chr3:21147835-21150027 FORWARD LENGTH=468
Length = 467
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 120 MSRQFADLLASGDG-ADVEFRVGGETVAAHRAVLAARSRVFR---------------AEL 163
MS + +LL +G +DV F V G V AHR +LAARS FR A
Sbjct: 12 MSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPSQPGAEPANQ 71
Query: 164 FGPMKEGVAANGTIQVDDMDAEVFRSLLHFVYTD--SLPPETGTPREGA 210
G A G I V+ + EVF LL F+Y+ S+ P PR
Sbjct: 72 TGSGARAAAVGGVIPVNSVGYEVFLLLLQFLYSGQVSIVPHKHEPRSNC 120
>AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738
Length = 737
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 134 ADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAANGTIQVDDMDAEVFRSLLHF 193
+DV F + G+ AH+ L A S +FRA G KE A N +++ ++ EVF ++ F
Sbjct: 568 SDVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQN--VEIPNIRWEVFELMMKF 625
Query: 194 VYTDSLPPETGTPREGAAMAQHLIVAADRYDLERLK 229
+Y +G +A+ L+VAAD+Y LE LK
Sbjct: 626 IY-------SGRINIAKHLAKDLLVAADQYLLEGLK 654
>AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711
Length = 710
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 116 PPSEMSRQFA--DLLASGDGADVEFRVGGETVAAHRAVLAARSRVFRAELFGPMKEGVAA 173
PPS R + + + +DV F V G T AHR L A S FRA G +E A
Sbjct: 521 PPSPTQRVYLGEQYVNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDAR 580
Query: 174 NGTIQVDDMDAEVFRSLLHFVYTDSLPPETGTPREGAAMAQHLIVAADRYDLERLK 229
+ I++ ++ EVF ++ F+YT S+ +++ L+ AAD+Y LE LK
Sbjct: 581 D--IEIPNIKWEVFELMMRFIYTGSVDITN-------EISKDLLRAADQYLLEGLK 627
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,091,899
Number of extensions: 181926
Number of successful extensions: 318
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 309
Number of HSP's successfully gapped: 11
Length of query: 285
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 188
Effective length of database: 8,447,217
Effective search space: 1588076796
Effective search space used: 1588076796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)